Garra rufa (doctor fish): 141295471
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Entry
141295471 CDS
T11039
Symbol
tdrd6b
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141295471 (tdrd6b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141295471 (tdrd6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
Agenet
SGF29_Tudor
Motif
Other DBs
NCBI-GeneID:
141295471
NCBI-ProteinID:
XP_073682787
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All DBs
Position
21:complement(5852577..5858201)
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AA seq
1787 aa
AA seq
DB search
MCSVPGLPEVGFSTTVHITRVSLNPQTVLVEFGGSFNHGQESREAYQQLEDIEVPRKRQH
AFEGKPGEICLVYEDRTWHRARILSKSEHEYKVFLIDDGKFLWASSEVLTNCPRHLCSLP
PKVELCLLANVSPLCLESGWSVAASKFIRSLCGKDISGCVQDVVMPFRMIILDIPSVSKQ
MYELGFARKMPNEDFKSLLMHSLHLPRRIPSIQTDLVTTNGQQEHASDPDKLHQYLYPEL
LPGTVEIVTVTQVIHPLKLYCKLCVFSQELKKLSYQLHEYYENTFSAQMPMLLYDGSPCA
TKGSDGKWYRSVLQQNNVSDVVKVFHVDYGIGDFVKLGNIRPLSGRFFKLPVVTYACSLH
GVIDKGMGWRTEQIDYLKSVVLDQILVGKFEHHSANEGVYYITLYGNDNVNVNNTFGHGE
QCLSTTERICGDQTLETLNKVAHKYTYERNLPIHSLDSTVLTECSDSLDVDTVARPSKTG
KNLEPAALPFQSEAYVVSLPKTEVGAKEKVRITCVQSVNQFYGHFAQNNDTVRKITKDIQ
QLCRKPPQGKFPIYPKMMCLAKYADGLWHRGQIESTHPEIRVQFVDYGDLVVLDKSDIRP
LPPKASEVASIPIQAVQFELFNVTLPKICELNEWFKNYATDCMFTVIVKQISSGKLSVEM
CDEKTNLNLKIKEQWNQLTKRKGSNVGKGTEKARTFNKSSEALEPRGVRHNFSTTSQAHE
KTSKKVPNPVVQGTLEQNFQTVTGHSRAKPNVLQQQVPCHYPKLTDLPSRALEAGYGSDI
YVSHCNSPSNFFVQLASDEDEIFSLLDKLNSAQLSDPQVELDLLQSGDLVVAEYPADGAW
YRAVVQNKKNGMAHVQFIDFGNEATLLPLKIRQLGKQFLSTPRFSIHCTLEDGRGGKRVW
TQEEVMTFKKAAGENGEKKIQCKFIREVGSAWIVSLDLGEWALCNVAFKSGAQTEDIQPL
AFKDPAVTQGQIVDAYASSIVGPNYFWCQLKNSEELDKISLLAQEIGNSSQTKPIQPDQL
CKGPCLALFSDQLWYRAQVINTHSKTVSVLFVDYGNESEIDLNFVKSLPTKLLESPPQAF
LCQLDALGSVDGTWSDAAADKFFELLVDEPLKVTIQNRIISSDLPNCPQYNVLVECNCLI
VNDLMKDYRCGPKPQVCSEVTVDAKTKPTAGKDSFGVTSFETIQKDDAPKLNFNSEAAND
VNPDLHSFDPQVSQNKLPQAVDLPPRMIGPGKVSEVYVSHINSLTSFFVQLVEDENTLFS
LTEQLNSHQPSEKDEIHASSIQQGSLMKAMFPEDESWYRAVVKDTTKNDTFQVEFIDFGN
EAIVSLPKIGRLDEQLLSYPRFSIHCSCSLDVRFKAQKGMKEQMFLFKKLFGEPGENTLS
CKFIKEDGITWEVKMTPSGSTSDSSEKWDSLDLKTSPVAEITQLLFKKPDVSLGQTVEAF
ASCIVGPDYFWCQFSNSEILDQITFVAQEHGNSSETQPIKLDNLDPGSLCLARFCDDQMW
YRAQVISKCTNTVSVLFVDFGNESETSEDSVKALPCDLLESPPQAFLCRLEGFDPSKGSW
DSAATDNFYELLVDKPLKVTVQCIDTTTDSNSPPYYVKVESPQCLANELMTKFWSCSAQN
AQNSSEEIEFCEKSIASASDQLVSEDKTSMNLAVSTEDMHTTKPHGADQTEPLELKGDLH
GVPENEVDDQLDGADVITAITAKDTTGMNSDLEVQKVCNEADDGVESAEQMLHTEQSRKD
KEDGRSKNVDNPMTASRSTDWVAGLENPVLPMVCTEDSCGSVKCLFK
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcagttcctggtttgccagaagttggtttcagtacaactgttcatatcaccaga
gtcagtttaaacccacaaactgtcttggtagaatttggaggaagttttaatcatggacag
gagagcagggaagcatatcaacaacttgaagacattgaagtccctaggaagcgacaacat
gcttttgaaggcaaacctggagaaatttgcttggtttatgaagacagaacttggcataga
gcaagaatactttcaaaatctgaacacgaatacaaggtgttcctaattgatgatggtaaa
tttctctgggcctcaagtgaagttctgacaaactgtccacgccacctttgcagtctgcct
cccaaagttgagctttgcctgctggccaatgtgtcacctctgtgtcttgagagtggatgg
tctgtggccgcttcaaagttcatcagatctttgtgtgggaaagacatctctgggtgtgtt
caggatgtggtaatgcctttcagaatgatcattcttgacattccaagcgtatccaaacaa
atgtatgaacttggatttgctagaaagatgcctaacgaagactttaaaagccttctaatg
cactcactgcatttgccaagaagaatcccttccatacaaaccgatcttgtgaccacaaat
ggtcaacaggagcatgccagtgaccctgacaagttgcatcaatacttgtatcctgagttg
ttgcctggaacagttgagatcgtaacggtgacgcaagttattcatccattgaaactctat
tgtaaattgtgtgtcttttcacaagagctcaagaagttaagttatcagctccatgaatat
tatgaaaacacattctctgctcagatgccaatgctgctgtatgacgggtctccatgtgca
accaaaggaagtgatggcaagtggtatcgatctgtactgcagcagaacaatgtctcagat
gttgtcaaggtgtttcatgtagattatggaattggtgattttgttaaactcggcaatatc
aggccactttctggcagattcttcaaattgccagttgtcacctatgcatgctctctacat
ggtgtcattgacaaaggcatgggatggagaacagaacagatagattatctgaaatctgtt
gtactggatcaaatcctcgttggaaaatttgagcatcacagtgcaaacgagggtgtctat
tacataacgctttatggaaatgacaatgtgaatgtgaacaacactttcggccacggagaa
cagtgtttatcaacgactgagaggatttgtggtgaccaaactcttgagaccctaaacaaa
gtggcacacaaatatacgtatgagagaaatttgcccatacattctcttgattcaaccgtt
ttaaccgagtgctccgattctcttgatgttgacactgttgccagaccttccaaaactggg
aaaaacctagaacctgcagctttaccttttcagagtgaagcatatgttgtttcactaccc
aaaactgaagtaggtgcaaaggagaaggttcgaataacctgtgtccaaagtgtgaaccag
ttctatggccattttgcacaaaataatgatacagttaggaaaataaccaaagatattcaa
caactgtgccgcaagccaccacaaggaaagtttccaatttacccaaagatgatgtgcctt
gctaaatatgcagacgggctgtggcacagagggcaaattgaatcgacgcatccggaaata
cgagtccaatttgtggactatggtgacctggtggttttggataaatctgatattcgccca
cttcctccaaaggctagtgaagttgcatccattcccattcaggctgttcagtttgagctt
ttcaatgtaactctacctaagatatgtgagcttaatgagtggttcaaaaactatgctaca
gactgcatgttcacggtcattgtgaaacaaatttcttcaggcaaactatcagtggagatg
tgtgatgagaaaacaaacctcaacttaaaaattaaagagcagtggaaccaattgaccaaa
cgaaaagggtctaacgtcggcaaaggaacagaaaaggctcgtacattcaataaatcatca
gaagctctggagccaagaggtgttagacacaatttcagcactacatcacaagcacatgag
aagacctctaagaaagtcccaaatccagttgttcaaggcacactggagcaaaacttccag
actgttactggacacagtagggctaagcctaatgttttacagcaacaagtgccatgccat
tatccaaagcttaccgatcttccctcaagagccttggaagcaggatatggctcagacatc
tacgtttcacattgtaatagtccttcaaatttctttgtacaattggcaagtgatgaagat
gaaatcttttcccttctcgacaaacttaattctgctcagttaagtgatccgcaagttgag
ctagacctgttgcagtcaggtgacctggtggtagctgaatatcctgctgatggggcctgg
tatcgtgctgttgttcaaaacaagaaaaatggcatggctcatgtgcagtttattgatttt
ggcaatgaggcaacactcctgccccttaaaataaggcaacttggcaagcagttcctcagc
acccccagattcagtattcattgcacacttgaggatggtagaggaggaaaaagagtttgg
acccaggaagaggtaatgactttcaaaaaagcagcgggtgaaaacggtgagaagaaaatt
cagtgcaagttcatccgagaggtcggatctgcttggattgtaagtttagatctcggggaa
tgggctttgtgtaatgttgctttcaagtcaggtgctcaaactgaagatatccagccgtta
gcattcaaggacccagctgtaactcaaggacaaattgtggacgcgtacgcatcatctatc
gtcggaccaaattacttctggtgccagctcaaaaactcagaggagcttgacaaaatctcc
ctgcttgcacaagaaattggaaactctagtcaaacaaaaccaattcagccagatcagtta
tgcaaaggaccatgcctggcactcttttctgaccagctgtggtaccgtgcacaggttatc
aatacacattctaaaacggtctctgttctttttgtagattatggaaatgagtctgaaatt
gaccttaactttgttaaatccctgcccaccaagctcctggaaagcccaccgcaagcattt
ctttgtcagttagatgctttggggtctgtagatggcacttggagtgatgctgcagctgac
aaattctttgagcttctggtggatgaacctttaaaagtgactattcagaataggataata
tcctctgaccttccaaactgtcctcagtataatgtccttgttgaatgtaattgccttatt
gttaatgatctaatgaaagattaccggtgtggccccaaacctcaagtttgcagcgaagta
acagtggacgctaaaacaaagcccactgcaggtaaagacagttttggagtaacaagcttt
gaaaccattcagaaagatgacgctcccaagcttaactttaacagcgaagcagcaaatgat
gttaaccctgaccttcacagttttgaccctcaggtttctcagaacaaattacctcaagct
gtagatcttcctccacgtatgataggaccaggtaaggtgtctgaagtgtatgtttcgcac
atcaacagcctgacaagtttttttgttcaactggtagaagatgagaacacattattctcc
ctcaccgagcagttgaattcccatcagccatctgagaaagatgaaatccatgcatccagt
attcagcagggaagtttaatgaaggccatgtttcctgaagatgaatcctggtatcgtgct
gttgtgaaggacacgactaaaaatgacacttttcaggtagagtttatagattttggaaat
gaggcaatagtttctctgcctaaaattggcagacttgatgagcaactactgtcatatccg
aggttcagcattcactgcagctgcagtctagatgttcgattcaaggcacagaagggaatg
aaggagcagatgtttctcttcaaaaagttatttggtgagcctggtgagaacacgctgtct
tgcaagtttatcaaagaagatggcatcacctgggaggttaaaatgactcccagtggcagc
acatcagattcaagtgagaaatgggatagtttagacttaaaaacatccccagttgctgaa
atcacccaactgctcttcaagaaaccagatgtctctttgggacagacagtagaagccttt
gcatcatgcattgttggaccagactacttctggtgccaattttcgaactctgaaatactt
gaccaaatcacctttgttgcccaagaacatggaaactctagtgagacacagccaattaag
ctggataatttggatcctggaagcctgtgcctggctcgtttttgtgatgatcagatgtgg
tatcgtgcacaggttattagtaaatgcacaaacactgtatctgtcctttttgttgacttt
ggaaatgagtctgaaaccagtgaagactctgttaaggcactaccttgtgacttgctggaa
agtccacctcaagcttttctgtgtcggttggaagggtttgatccttccaaaggatcttgg
gacagtgcagccactgataacttctacgagctcttagtggataaacctctgaaagtgact
gtgcagtgcatcgacaccacaacagactctaacagtcctccatattatgttaaagttgag
tctccgcaatgtctcgcaaatgagctcatgacgaaattttggagctgttctgcacaaaac
gctcagaactcttcagaggagattgaattctgtgaaaaatccattgcatcagcatctgat
caacttgtttcagaggataaaacaagtatgaaccttgccgtctctacggaggatatgcat
acaactaaacctcatggagctgatcagactgaaccattagaactaaaaggtgacttgcat
ggtgtgcctgaaaacgaggtggatgatcagcttgatggagcagatgtaattactgcaata
actgctaaagatactacagggatgaattcagatttggaagtccagaaagtctgtaatgaa
gctgacgatggagttgaatcagctgagcaaatgctgcacacagagcaaagtagaaaagat
aaagaagatggaagatctaaaaacgtggacaacccgatgactgcaagcagaagtacagat
tgggtggctggtttagaaaatccagtgttacccatggtttgcactgaagattcatgtggc
tctgttaagtgcctcttcaaatga
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integrated database retrieval system
