Garra rufa (doctor fish): 141295515
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Entry
141295515 CDS
T11039
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03008
Ribosome biogenesis in eukaryotes
grf03013
Nucleocytoplasmic transport
grf03250
Viral life cycle - HIV-1
Brite
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
141295515 (xpo1b)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
141295515 (xpo1b)
Pre-60S particles
141295515 (xpo1b)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
141295515 (xpo1b)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
141295515 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
141295515
NCBI-ProteinID:
XP_073682841
LinkDB
All DBs
Position
21:19096564..19118941
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPTQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
TLNPSNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagctgaccacgcagccagacagctgctggactttaac
cagaaactggatatcaatctgctggataatgtggtcaactgtctgtaccatggggttggg
ccacagcaaagaatggcccaggaggtgctgactcatttgaaggagcacccagacgcgtgg
acccgtgtcgacactattctggagttctctcagaacatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattctgcccagaaaccagtgtgaa
ggcattaaaaagtatgtcgtgggcctcattatcaagacatcatcagatgcagccaatgtt
gagaaagagaaagtgtacattggaaagctcaacatgatattagtacagatcctgaagcag
gagtggccgaaacactggcccacatttatcagtgatattgttggtgcgagccgcaccagc
gagagcctttgccagaacaatatgatcattctcaagctcctcagcgaggaggtgtttgac
ttctccagtggccagatgacacaagtgaaagccaaacacctgaaggacagcatgtgcaat
gagttctcccagatattccagttgtgccagtttgtgatggaaaattcccagaatgcccca
cttgtacacgctacattagaaactctgctgaggtttctcaactggattcccttgggctat
atctttgaaacgaaactcatcagtactctggtatacaagtttttaaatgtgccgatgttt
cgcaacgtgacactgaagtgcttgactgagatagcaggagtcagcgtcagccagtacgag
gagcagtttgtcagtctcttcacactgaccatgatgcagctcaaacagatgcttcctttg
aacaccaacattcgattggcgtatgcaaacggtaaagatgatgagcaaaacttcattcag
aaccttagcctgttcctctgcaccttcctcaaagagcacggacagctgatagaaaagaga
ctgaaccttagagagacgcttatggaggctctgcattacatgttgctggtgtcagaggtg
gaggagacggagatctttaagatctgtttagagtactggaatcatttggcggctgagctt
tacagagaaagtcctttctcaacatccacctctcctctcctctcagggagccaacacttc
gatgtaccgccccgcagacaactctacctgcctgtgctgtctaaggtgcgcttgttgatg
gtgagccgcatggccaagccagaggaagtgctagtggtggagaacgatcaaggcgaggtg
gttcgagagttcatgaaggatacagactccattaacctctacaagaacatgagggagaca
cttgtctatcttacccatctggactatgctgatactgaacgtatcatgacagaaaagctt
cataatcaggtgaacggtactgagtggtcctggaagaacctgaacacgttgtgctgggcc
attggatccatcagtggagccatgcatgaagaggatgagaagcggtttctcgtcactgtc
attaaggacctgctgggcctatgtgagcagaagagaggcaaggataacaaggccatcatt
gcctccaacatcatgtacatagtgggccagtatccacggttcctacgtgcgcactggaaa
ttcctgaagactgttgtcaacaaattgtttgaatttatgcatgaaacccatgatggagtg
caggacatggcgtgtgacacgtttattaagattgctcagaagtgcaggaggcattttgtc
caggtgcaggtgggcgaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccagcaggtgcacacattttatgaagctgtcgggtatatg
attggagcgcagaccgaccaagctgtacaggagcacctgatagagaagtacatgttgttg
cctaaccaggtgtgggacagcatcattcagcaggccaccaagaatgtggacatcctgaag
gaccctgagacagtgaagcagttaggcagcatcctgaagaccaacgtcagagcgtgtaaa
gccgtgggacacccttttgttattcagctgggccggatctacctggacatgctaaatgta
tacaagtgcctcagtgaaaacatctccgctgccatccaaactaacggtgagatggtaaca
aagcagcctctaatcaggagcatgcgcacggtgaagagagagactttgaagcttatctca
ggctgggtcagccgctccaatgacccacagatggtgggggagaactttgttcctccgctg
ttggatgccgtgctcattgattaccagcgcaatgtcccagcggcaagagaacccgaagtg
cttagtaccatggcaacaatcgtaaacaaactgggtggacacattactggagagatccca
cagatatttgatgcagtgtttgagtgcacattaaacatgatcaacaaagactttgaagag
tacccagaacaccggacgcatttcttctacctgctgcaggcggtgaactctcactgtttc
ccagcattcctagccatcccaccaacccagtttaagcttgtgcttgactctattatatgg
gcttttaaacacactatgagaaacgtggcagacactggccttcagattctctacacgctg
ctgcagaacgtggcccaggaggaagcagcagctcaaagcttctatcagacatacttctgt
gacgtcttacaacacatcttctctgtcgtcacggatacatcacatacagccggtttgacc
atgcacgcttctattttggcgtacatgtttaaccttgttgaggaaggaaaaatcagtaca
actctaaacccttcaaacccagtgaacaaccaagtgtttattcaggagtatgtggccaac
ttgctcaaatcagcttttccacacttacaagatgcgcaggtcaaagtatttgtgactggc
ctgttcagtttaaaccaagacatcccagcattcaaagaacacttgagggatttccttgta
cagatcaaggaatttgcgggtgaggacacctcggatctgttcctggaggagagggaggct
tctctgcgtcaggcccaggaggagaaacacaagctgcagatgtccgtgcccggcatcctc
aaccctcacgagatacccgaggagatgtgcgactga
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