Garra rufa (doctor fish): 141295635
Help
Entry
141295635 CDS
T11039
Symbol
srp54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03060
Protein export
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
141295635 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
grf02044
]
141295635 (srp54)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
141295635 (srp54)
Secretion system [BR:
grf02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
141295635 (srp54)
Eukaryotic Sec-SRP protein
141295635 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_33
NPHP3_N
DUF2209
AAA_17
ResIII
SRPRB
AAA_22
MeaB
nSTAND_NTPase5
AAA
AAA_19
MobB
APS_kinase
AAA_30
PduV-EutP
Zeta_toxin
nSTAND_NTPase7
6PF2K
ATP_bind_1
Thymidylate_kin
AAA_16
AAA_18
Torsin
Motif
Other DBs
NCBI-GeneID:
141295635
NCBI-ProteinID:
XP_073682984
LinkDB
All DBs
Position
21:7916817..7923366
Genome browser
AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCAALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKNNVIMFVGLQGSGKTTTCSK
LAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
TENFEIIIVDTSGRHKQEDSLFEEMLQVSNAVQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFGQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPNRIQRVARGSGVATRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QSMMRQFQQGAAGNMKGMMGFNNM
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggttttagctgatctggggaggaaaataacctcagctttgaggtctctcagcaatgcc
accatcatcaatgaggaggtattaaatgctatgctcaaggaagtctgcgctgccctgctg
gaagctgatgttaatatcaagttggtaaagcaacttagagaaaatgtcaaggcagccatt
gatctggaagagatggcctctggcctaaacaagagaagaatgatccagcatgcagttttc
aaggaacttgtcaagctggtggatcctggagtaaaagcctggactcctacaaagggaaag
aacaatgtgatcatgtttgtgggtctgcagggcagtggaaaaaccacaacatgttctaag
ttggcgtactactaccaaagaaaaggatggaaaacgtgtttgatttgtgccgacacattc
agagcaggtgcctttgaccaactcaagcaaaatgcaacaaaagccagaatacccttttac
ggaagttacacagaaatggatccagtgatcatagctgcagagggtgtggaaaaattcaaa
acagaaaactttgaaataatcattgtagacaccagtggtagacataaacaggaagactca
ctttttgaagaaatgcttcaggtgtcaaatgctgtgcaacctgacaacattgtgtacgtg
atggacgcctccattggtcaggcttgcgaggctcaggctaaggccttcaaagacaaggta
gatgtggcttctgttattgttaccaaactggacggccatgccaagggtggtggcgcactc
agtgctgtggcggccacaaagagtcccatcatttttatcggcacaggcgagcacattgac
gactttgagcctttcaagacacaaccattcataagcaaactgcttggtatgggagacatt
gagggactgattgacaaagtgaatgaactaaaacttgatgacaatgaggagctaattgac
aagctcaaacatggtcagtttacactcagggacatgtatgaacagtttcagaacatcatg
aagatgggaccttttggtcagatcatgggcatgatcccaggctttggaacagatttcatg
agcaaaggaaatgagcaggagtctatggccaggctaaagaaactcatgacaataatggat
agtatgaatgaccaggaacttgacaacaaagatggtgccaagctcttcagcaaacagcct
aaccgcatccagagagtggcccggggatctggagtggctaccagggatgtacaagagtta
ctcacacagtacacaaagtttgcccagatggtcaagaagatgggaggcattaaaggctta
tttaaaggaggagacatgtccaagaacgtcaacccatcacagatggcgaaactgaaccag
cagatggctaaaatgatggatccaagagtgcttcaccacatgggtggcatggctggactg
cagtccatgatgagacagtttcagcagggagctgctggcaacatgaaaggcatgatggga
tttaacaacatgtga
DBGET
integrated database retrieval system
