KEGG   Garra rufa (doctor fish): 141295808
Entry
141295808         CDS       T11039                                 
Name
(RefSeq) calpain-1 catalytic subunit
  KO
K01367  calpain-1 [EC:3.4.22.52]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04141  Protein processing in endoplasmic reticulum
grf04210  Apoptosis
grf04217  Necroptosis
grf04218  Cellular senescence
grf04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141295808
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    141295808
   04217 Necroptosis
    141295808
   04218 Cellular senescence
    141295808
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    141295808
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:grf01002]
    141295808
Enzymes [BR:grf01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.22  Cysteine endopeptidases
    3.4.22.52  calpain-1
     141295808
Peptidases and inhibitors [BR:grf01002]
 Cysteine peptidases
  Family C2: calpain family
   141295808
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III CAPN13-like_C_EFh EF-hand_6 EF-hand_7 EF-hand_1 EF-hand_3 DUF6293_C
Other DBs
NCBI-GeneID: 141295808
NCBI-ProteinID: XP_073683184
LinkDB
Position
21:30677600..30687013
AA seq 716 aa
MGEISCCCNLKTDFEMPPPAVPHGMCFKVINDRNMKGGMGSETNPLKFMDQDYNYLQDYC
LRSRQRFVDEFFPPDPCSIGEGLLDPDVMARVEWIRPTVLHPNVAEFVVDTVSRFDYAQG
NVGNCWFLASVGALTFQTKLLHKVVPDGQSFSHNYTGLFHFRFWRFGKWYDVVIDDKLPT
YNGKLIFFRSKTYNEFWPALLEKAYAKVCGSYADMHTGRVSEALLDFTGGVHMHYELKTA
PTDLWEIMYRAYQSEVLMGCETPPGNEKWLPNGIILGHAYTVTKVYQVMSGKNPVQLVRL
FNPWRDSEWNGDWSDKSHLWNTVSDEDRQQHLVHENGEFWMSMKDFLDTFDNMDICCTCP
DFLEETSACRWISKYHHGSWVLGSTAGGCMNHPDTFCKNPQFWLRISEFNKACEQGQKNV
LVSLIQKPDRRHRRNAAHHGIGFCVFAIPLEMRSEGKFGSSFFSTRKPLVTSGHFQDSRQ
VMKFFRLEPGEYLIVPSTYYPNKSGEFILSILCKNEIHIQKDTERMEKKFLVDLLGESEV
SYTEKMDERSKTKILFRQYSDQYKVVDAEKLQQLLHENLLSGNKNTEGFGLDSCRSIIAM
SDCNVTGRLCGPEFIRLWNRIITYKEIFYSMDSSKDGILSLNELQNALEKTGLHLNEDIL
NLMFVRYGDASEQISLEGFICLVMRLNCMCRIFQRLCENGKITLDESEWIGLTMYS
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgggcgaaatatcttgctgctgtaatttgaagacagatttcgaaatgcctcctccagcg
gttccacatggcatgtgctttaaagtcataaacgaccgcaacatgaagggtggaatgggc
tctgaaacaaatcctttgaagttcatggatcaggattacaactatttacaagactactgt
ctcaggtcaagacagagatttgttgatgagttttttccgccagatccgtgttccattggc
gaagggctgctggatccagatgtcatggccagagtggagtggataagaccaactgtattg
catccaaatgtggctgaatttgttgtagatacagtgtccaggtttgactatgcccaaggg
aatgtaggaaactgttggtttctggcctctgttggggctttaacatttcaaaccaaatta
ttgcacaaggttgttccagatggacagtcattcagccacaattatactggtttatttcac
tttagattctggcggtttggaaaatggtatgacgttgtgattgatgacaaactgccaaca
tacaacggcaagctgattttttttagatcaaaaacatataatgagttctggcctgctttg
ctggagaaagcatatgccaaggtgtgcggctcctacgctgacatgcatactggtcgagta
tctgaggccctcttggactttaccggtggggttcatatgcactatgaactgaaaacagct
cctactgatttgtgggagataatgtaccgtgcttaccagtcggaggtccttatgggctgt
gaaactccaccagggaacgagaaatggttaccaaatggcataatcctgggtcatgcttac
acagtgacaaaggtttaccaggtcatgagtggtaaaaacccagttcagctggttagattg
ttcaacccatggagagacagtgagtggaatggagactggagtgacaaatcacatttgtgg
aacaccgtgagcgatgaggaccgccaacaacaccttgtgcatgaaaatggagagttctgg
atgtcaatgaaagatttcctagatacatttgacaacatggatatctgctgtacctgtcct
gattttctggaagagacgtctgcttgtcgatggatttccaaataccaccatggcagttgg
gttcttgggagcacagctggaggctgcatgaatcatccagacaccttctgtaaaaacccc
cagttttggttgaggattagtgagtttaataaggcctgtgaacagggacagaaaaatgtt
ctggtgtccctcatacagaaacccgacaggagacacagacgcaacgctgcacaccatggc
atcggcttctgtgtgtttgcaattccacttgagatgagatctgagggaaagtttggatca
agctttttcagtacaagaaagcccttggtaacaagtgggcactttcaagattcaagacag
gtgatgaaattcttcaggctggagccgggagagtatctcatcgtaccatccacatactat
cccaataagagtggagaattcatcctgtccatcctctgcaaaaatgaaatccacattcaa
aaggacacagaaagaatggagaaaaaatttctagtggatcttttaggcgagtctgaggtc
agttacactgaaaaaatggatgaaagatcaaaaactaaaatactgtttagacaatattct
gatcagtacaaagttgttgatgctgagaagcttcaacagcttcttcatgaaaacctactt
agtgggaataaaaacactgaaggatttggcctggattcctgtagaagtattattgccatg
tcagattgcaatgttactggaagactttgtggaccagaattcattcgtctatggaaccgt
attataacgtacaaggagattttctacagcatggattcttccaaagatggcattctgtct
ttaaatgaactgcaaaatgctttagagaaaacaggcctgcatctaaacgaagacatcctg
aatctcatgtttgtgcggtatggtgatgcttctgaacagatttctctggagggtttcata
tgccttgtcatgcgtttaaactgcatgtgcagaatattccagagactgtgtgaaaatgga
aagataactcttgatgagagtgagtggatcggactgaccatgtactcatga

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