Garra rufa (doctor fish): 141295844
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Entry
141295844 CDS
T11039
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04519
Cadherin signaling
grf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
141295844 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
141295844 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141295844 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
PDZ domain-containing proteins
MAGUK family proteins
141295844 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SHMOOSE
SH3_9
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
141295844
NCBI-ProteinID:
XP_073683223
LinkDB
All DBs
Position
21:complement(35498257..35536664)
Genome browser
AA seq
707 aa
AA seq
DB search
MQKAPLLTLIPHTHSHHTSPHTRTAMMTTSHMNGYVTESDSGGGIGGGTDFLEEVVQRHR
EMAVDCPSELGARTLAVRRSAQLERIRQQQEDRRRREEEGRNRQELDLNSSMRLKKLSQN
PKVGIDNPTFEQMEGPGGSVGGLQSLTAPPTLLELEDLLMSLKQVQHSLNDSQSQEDIEL
VLQLVQKSDFQKAFNIHNSVAHYMNRPSPPYPMTDHAQSLAQEVEVMMHNSSQKEGLELS
TLLKTPHMQALMMTHDSVAEQEMQLEPLVPSVNQSETLTQWGGETVKIVRIEKAKDIPLG
ATVRNDMDSVIISRIVKGGAAERSGLLHEGDEILEINGVEIRGKDVNEVFDILADMHGVL
SFVLIPSAQIKPPPIKETVVHVKAHFDYDPSDDPYVPCRELGLCFQKGDILHIISQDDPN
WWQAYRDGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKM
QYNANKNDDFDNEEVLTYEEMALYHQPANRKRPIALIGPPNCGQNELRQRLLSSEPDRFA
GAVPHTTRSRRDIEVNGRDYHFVTRQAFEMDSAAGKFIESGEFEKNLYGTSTDSVRQVIN
TGKICLLCVHTQSLKVLRSSDLKPYIIFIAPPSQERLRALLAKDNKNPKPEELRDIIEKA
REMEQNYGHLFDAAIVNSDLDKAYQELLRLINKLDTEPQWVPSSWLR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagcacccctcttaaccctcatacctcacacacactcacaccacacatcacca
cacacacgcacagccatgatgaccacctcccacatgaacggatatgtgaccgagtcagac
agcgggggagggatcggcggaggcactgactttctggaggaggtcgtgcagaggcacagg
gagatggcggtcgactgccctagtgaactgggtgcccgcacccttgccgtcagacgcagc
gctcagctggaaagaatccgccagcagcaggaggaccgcagaagacgggaggaagaaggc
cgcaaccgtcaggaactcgatcttaactcatccatgcgcctcaagaaactctcacagaac
cccaaagtgggcattgataacccgaccttcgagcaaatggaaggtccgggtggctccgta
ggtggtctgcaaagcctcaccgcaccaccaactctactagagctggaggacctgttgatg
tccctcaagcaggtgcagcatagtttgaatgactctcagagtcaagaagacatagagctg
gttctacagctggtccagaagtctgacttccagaaagccttcaacattcacaactcagtg
gcccactatatgaaccggcccagccctccctaccctatgacggaccacgcacagagcctc
gcacaagaggtggaagtcatgatgcacaacagctcacagaaggaaggacttgagctaagc
accctgctcaaaacgcctcacatgcaggcgctcatgatgacccatgacagtgtggctgaa
caagagatgcagctggagcctcttgttccttctgtcaatcaaagtgagactctcacccaa
tggggcggggagactgtcaaaatcgtgcggatcgagaaagcaaaggacatcccattggga
gccactgttagaaatgatatggacagcgtaatcatcagccgcatcgtgaaaggaggggcg
gcagaacgcagtggccttctgcatgaaggagatgagattctagagatcaatggtgtggaa
atccgtgggaaagatgtcaacgaagtcttcgacatcctggcggacatgcatggtgtactg
agttttgttctcattccgagcgcgcagatcaaaccacctcctattaaagagactgtggtg
cacgtgaaggcacattttgactacgacccctcagatgacccctacgttccatgcagagag
ctcggcctgtgttttcagaagggagatatcctacacattatcagccaagacgaccccaac
tggtggcaggcctacagagatggggatgaagacaaccaacctcttgctggcctggtccct
ggcaaaagtttccagcagcaaagagaggcaatgaagcaaaccatagaggaggataaagag
cctgagaaatcaggaaaactttggtgtgcaaaaaagaacaagaagaagcgaaagaagatg
caatacaatgctaataaaaatgatgactttgataacgaggaggttctcacatatgaagaa
atggcactatatcaccagccagccaatcgcaagcggcccatcgctctcatcggcccacca
aactgtggtcaaaatgagctaagacaaagactgctatccagtgagccggacaggtttgct
ggtgctgttcctcacaccacacgaagccggcgtgatatcgaggtgaatggccgtgattat
cactttgtgactcgtcaggcctttgagatggactctgcggcagggaagttcatagagtct
ggagagtttgaaaagaacctctacggcaccagcacagactcagtccgacaagtcatcaac
acgggcaaaatctgcctcctctgtgtacacactcagtctttaaaggtgttgcgcagctcg
gacctcaagccctacattatcttcattgctcctccatcccaggagcgattgagagccctc
ttagcaaaagacaacaaaaacccaaagcctgaggagctaagagacatcatcgagaaggcc
cgtgagatggagcagaactacggccacctgtttgacgccgccatcgtcaactccgaccta
gataaggcctaccaggagctcctgcgtctcatcaataaactagacactgaacctcagtgg
gtcccctcatcctggctgcgctga
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integrated database retrieval system
