KEGG   Garra rufa (doctor fish): 141295889
Entry
141295889         CDS       T11039                                 
Name
(RefSeq) TATA box-binding protein-like 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    141295889
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:grf03000]
    141295889
   03021 Transcription machinery [BR:grf03021]
    141295889
Transcription factors [BR:grf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    141295889
Transcription machinery [BR:grf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     141295889
  RNA polymerase III system
    TFIIIB
     141295889
  RNA polymerase I system
    SL1/TIF-1B
     141295889
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 141295889
NCBI-ProteinID: XP_073683272
LinkDB
Position
21:8336117..8341215
AA seq 310 aa
MDEEGALENYFDQTIASSSDYIFEGDLGLQGPAPQLQDSSFLSSLASQGKDLTEDLDLSF
LPDELSTQDEPSQAENVSRNEDSGIYTDCPPRESTEADTDTSHSAQNASQFNLPMTPMTP
MTPMTPVAESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPR
TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPI
RLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENI
YPILKGFRKQ
NT seq 933 nt   +upstreamnt  +downstreamnt
atggatgaggagggagctctcgaaaattattttgaccagactattgctagttcatctgat
tacatctttgagggggatctgggcctacagggtccagctccacagctccaggattcctct
ttcctgtcctctttagcctctcaagggaaagatctcaccgaagacttggacctgagcttc
ttacctgatgaactgagcactcaggatgagccctcacaggctgagaatgtcagcaggaac
gaggacagcggcatttacaccgactgtcctccgagagagtcgacagaggcagatactgac
accagccattctgcccaaaatgcctcgcagttcaatctcccgatgactcccatgacccct
atgacccccatgaccccagtggcagagagttcaggcatcatcccacaattacagaatatt
gtgtcaacagtgaatctcgcttgccctctggatctcaaatccattgcacttcaagctcga
aatgctgaatacaacccaaagcgttttgctgctgttataatgaggatccgtgagccaaga
actactgctctcatattcagctctggaaaaatggtctgcactggggccaagagtgaggag
caatctcgccttgctgcgcggaaatatgcacgggtggtacagaaacttggtttccctgcc
aaattccttgacttcaaaatccaaaacatggttggaagttgtgacgtctgctttcctata
cgcttagaaggcctggtcctcactcaccagcagttcagcagctatgagccagagttgttt
cccggattgatatatcgcatggtgaagccacgtattgtgctgctgattttcgtgtctgga
aaggttgtgctcacaggtgcaaaagagcggtcagagatctatgaagcctttgaaaatatt
taccccatcctgaaagggtttagaaagcagtag

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