Garra rufa (doctor fish): 141295889
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Entry
141295889 CDS
T11039
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141295889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141295889
03021 Transcription machinery [BR:
grf03021
]
141295889
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
141295889
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141295889
RNA polymerase III system
TFIIIB
141295889
RNA polymerase I system
SL1/TIF-1B
141295889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
141295889
NCBI-ProteinID:
XP_073683272
LinkDB
All DBs
Position
21:8336117..8341215
Genome browser
AA seq
310 aa
AA seq
DB search
MDEEGALENYFDQTIASSSDYIFEGDLGLQGPAPQLQDSSFLSSLASQGKDLTEDLDLSF
LPDELSTQDEPSQAENVSRNEDSGIYTDCPPRESTEADTDTSHSAQNASQFNLPMTPMTP
MTPMTPVAESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPR
TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFPI
RLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFENI
YPILKGFRKQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagggagctctcgaaaattattttgaccagactattgctagttcatctgat
tacatctttgagggggatctgggcctacagggtccagctccacagctccaggattcctct
ttcctgtcctctttagcctctcaagggaaagatctcaccgaagacttggacctgagcttc
ttacctgatgaactgagcactcaggatgagccctcacaggctgagaatgtcagcaggaac
gaggacagcggcatttacaccgactgtcctccgagagagtcgacagaggcagatactgac
accagccattctgcccaaaatgcctcgcagttcaatctcccgatgactcccatgacccct
atgacccccatgaccccagtggcagagagttcaggcatcatcccacaattacagaatatt
gtgtcaacagtgaatctcgcttgccctctggatctcaaatccattgcacttcaagctcga
aatgctgaatacaacccaaagcgttttgctgctgttataatgaggatccgtgagccaaga
actactgctctcatattcagctctggaaaaatggtctgcactggggccaagagtgaggag
caatctcgccttgctgcgcggaaatatgcacgggtggtacagaaacttggtttccctgcc
aaattccttgacttcaaaatccaaaacatggttggaagttgtgacgtctgctttcctata
cgcttagaaggcctggtcctcactcaccagcagttcagcagctatgagccagagttgttt
cccggattgatatatcgcatggtgaagccacgtattgtgctgctgattttcgtgtctgga
aaggttgtgctcacaggtgcaaaagagcggtcagagatctatgaagcctttgaaaatatt
taccccatcctgaaagggtttagaaagcagtag
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integrated database retrieval system