Garra rufa (doctor fish): 141295909
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Entry
141295909 CDS
T11039
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141295909 (scfd1)
Membrane trafficking [BR:
grf04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
141295909 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
141295909 (scfd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
141295909
NCBI-ProteinID:
XP_073683296
LinkDB
All DBs
Position
21:22222622..22241616
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AA seq
632 aa
AA seq
DB search
MAASIREKQTAALKRMLNFNAPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENVDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVNLVTKVFDQYLNFITLEDDMFILCNQNKEHISYHAINKPDIMDTDMEGIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSVEESQGSEASPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAEAVQEELDTYRAQEDEVKRLKSIMGLEGEDDG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTAEDKMRLFLIYYITSQQPPSEADVEQYKKALVDAGCDLSPL
NYIKQWKAFTKMAATPANYGSSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKARQGKRILYGCSELFNAGQFMKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatccgggaaaaacagacagctgctctgaagcgaatgctcaacttcaat
gccccacctctgaaaaacacagcagctgagccggtatggaaggttcttatttacgatcgc
tttggccaagacattatatctcccctgctgtctgtgaaagagttacgggacatgggcatc
actctacacctcttgttgcactcagatcgcgaccccattccagatgttcctgccatttac
tttgtaatgcccacagaggagaacgttgacaggatatgtcaagatctccgaaaccaacta
tatgagtcctactatttgaacttcatctccgcaatttccagaagtaagttggaggacata
gcaagtgctgctctagcagctaatgctgtaaacctggtgaccaaagtatttgatcagtat
ttgaacttcatcacgcttgaagatgatatgttcattctctgcaatcaaaacaaagaacac
atctcctatcatgcaattaataaaccagatatcatggacacagacatggagggcataatg
gacacaatagtggatagtctcttctgcttttttgtcactctgggtgctgtcccaattatc
cgatgtccaagagggaacgctgccgaaatggtagccgtgaaacttgacaagaaactgaga
gagaatctgcgagacgctcgtaacagcctgttcaccggagacaccatgggcactggccag
ttcagttttcagaggccactgtttgttcttgccgatcgtaacctggatctagcgactcct
ctccaccacacatggacgtatcaggctctcattcatgatgtgctggacttccacctgaac
cgggttagtgtggaggagtctcaagggtcagaggccagtccagctggagcacggcccaaa
aagaaaaacaagaagagctatgatctcactgctgctgataaattttggcagaaacacaaa
ggaagtccatttcctgaggttgcagaagctgtgcaagaggaactagatacatatcgagcc
caagaggatgaggttaaacgcctcaagagtataatgggcttagaaggggaggatgacgga
gctattagtatgttgtcagataacactgccaaacttacctcagccgtcagttctcttcct
gagctcctggaaaagaagagactgattgacctccacaccaacgttgccacagcagttctg
gaccacatcaagagccgtaagcttgatgtgtactttgagtatgaggagaaacttatgagc
aagtccacacttgataaatccctgttggacattatcagtgatcctgatgctggaacagca
gaagataagatgaggctgtttctgatctactacatcacttcccagcagcccccatctgag
gctgatgtagaacagtacaagaaagccttggttgatgcaggctgcgacttatccccactt
aactacattaagcagtggaaagctttcaccaaaatggctgcaacgccagccaattacggg
agcagtggagtcaaaccaatgggactgttctcaagggtgatgaacactggctcccaattt
gtgatggagggggtgaaaaatctggtcctgaaacagcataacttgccagttactcgcatc
ttggacaacttgatggaaatgaagtcaaacccggagacggatgactacagatactttgat
cccaagatgcttcgcggaagcgagagctccattccaaggaacaagaacccctttcaagag
gccatcgtctttgttgttggtgggggcaattacatagagtatcaaaatcttgttgactac
acaaaggccaggcaagggaagcggattctttacggctgtagtgagcttttcaatgcaggc
cagttcatgaaacagctctcccagcttggtcagaaatag
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