Garra rufa (doctor fish): 141295938
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Entry
141295938 CDS
T11039
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
grf Garra rufa (doctor fish)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
141295938
NCBI-ProteinID:
XP_073683323
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Position
21:10716282..10720989
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AA seq
655 aa
AA seq
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MELRVASVLLLLVAFTAAHGERYVVKKMVKGPQYQPYSVKGHVVSVAGEPGIPGEPGPAG
PPGPPGERGEDGEGLPGPQGPPGPPGPAGYSAPGKPGTPGGPGKPGATGAPGHKGDSGAP
GPQGPRGMPGPVGSPGPAGISATGKPGPSGLPGASGPQGPPGLKGHPGIPGAPGQKGERG
IGVQGPPGERGPSGPVGASGKPGEPGIGRPGKSGAPGEPGKSGSPGRDGEPGPMGPTGPK
GQTGAPGIGMPGKPGDNGAPGMPGSTGPKGPQGATGAPGAPGVPGYGKPGEPGAKGERGV
AGSPGTTGQKGEPGAKGHTGYPGATGAMGAAGPQGARGFPGERGATGDKGDQGPMGPQGM
KGHKGEQGPQGIEGKQGYTGATGQPGPRGATGAPGHKGEAGQNGAPGSPGTPGPAGPKGL
PGYPGETGEKGEAGNPGARGPVGPAGPSGAPGLKGHPGLPGAPGPAGLAAKGIPGPQGPP
GLPGSDGPAGLPGPVGPPGPPGPPGEVIFEKGQTESSYPVLVKSPVSAFTVATVTPYPPS
GTPIKFDQIVYNAEQHYDPETGLFTCQIPGIYYFSYSVHVNGANALVALYKNGEPVMFTY
DEYNKGFVDQMSGSSVLQLNEQDTVYIQIPDDEANGVFAADNVHCSFSGFLIAST
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaactacgagtagcaagcgttcttcttctcctggttgccttcacggctgcccatggc
gagagatatgttgtcaagaagatggtgaagggcccccagtaccagccttactctgtaaaa
ggccatgtggtatccgtagcaggagaaccaggcatccctggtgagccaggcccagctgga
cctcctggcccccctggagagcgaggagaagatggtgaaggactgccagggccacaggga
cctcctggaccacctggtccagctggttactcagcacctggaaaacctggaactccaggt
ggacccggaaaacctggagccacaggtgcacctggacataaaggagatagtggggcacct
ggtcctcaaggccccagaggcatgcctggtcctgttggtagccctggaccagcaggcatt
tctgcaacaggcaaacctggaccatcaggtctgccaggagcatcgggaccacagggtcca
ccaggtcttaaaggacatccaggtattcctggtgcaccaggacaaaaaggagaaaggggt
attggggttcaggggccaccaggtgagagaggtccaagcggaccagtgggtgcttccgga
aagcctggtgaacccggtattgggagacctggcaaatctggagctcctggtgaaccaggt
aaatcaggttcacctggccgtgatggggaacctggacctatgggtccaacaggtccaaaa
ggtcaaacaggtgctcccggaattggaatgcctggcaagccaggtgacaatggtgcccca
ggtatgcctggctcaactggccccaaaggcccacaaggtgcaactggtgctcccggtgct
cctggtgttccaggttatggcaaaccaggtgagcctggtgcaaagggtgagaggggagta
gctggtagcccaggaacaacaggtcagaaaggtgaaccaggtgctaaagggcacactgga
tatccaggtgctactggtgctatgggtgcagctggtcctcagggtgcaagaggtttccca
ggtgagagaggagcaacaggtgataagggtgatcaagggccaatgggacctcaagggatg
aaggggcacaagggagaacagggaccccaaggcattgagggcaagcagggttatacaggg
gcaacaggccaacctggtccaaggggagctacaggtgctccgggtcacaaaggtgaagct
ggccaaaacggtgctcctggttccccaggaacacccggacctgctggaccaaagggtctt
ccaggatatcccggagagacaggtgaaaagggagaggcaggaaatcctggagccagaggc
cccgttggcccagcaggtccttcaggcgcacctggccttaaaggtcacccaggtcttcct
ggagcacctggcccagctggtttggctgccaagggaattcctggacctcagggtccacct
ggacttcctggttctgatggacctgctggacttccaggtcccgttggacctcccggccct
cctggtcctcctggtgaggtcatttttgagaagggccaaactgaatcttcatacccagtt
cttgtcaaaagtcctgtgtctgcattcactgttgcaactgtgacaccctatcccccatct
ggtaccccaattaagttcgatcagatcgtgtacaatgcagagcagcattatgatcccgag
acaggtctgttcacttgccagattccaggaatctattacttctcctatagcgtgcatgtg
aatggtgctaatgctctagtggcactttataaaaatggtgaaccagtcatgttcacctat
gatgagtacaacaagggattcgtggaccagatgtctggtagctctgtccttcagctcaat
gagcaggacaccgtttatatccagatccccgatgatgaagccaatggtgttttcgccgct
gataatgtccattgctctttctctgggttcctgattgcctctacgtga
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