Garra rufa (doctor fish): 141296000
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Entry
141296000 CDS
T11039
Symbol
samd8
Name
(RefSeq) sphingomyelin synthase-related protein 1 isoform X1
KO
K22697
ceramide phosphoethanolamine synthase / phosphatidylethanolamine phospholipase C [EC:
2.7.8.48
3.1.4.62
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00564
Glycerophospholipid metabolism
grf00600
Sphingolipid metabolism
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
141296000 (samd8)
00600 Sphingolipid metabolism
141296000 (samd8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141296000 (samd8)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.8 Transferases for other substituted phosphate groups
2.7.8.48 ceramide phosphoethanolamine synthase
141296000 (samd8)
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.62 phosphatidylethanolamine phospholipase C
141296000 (samd8)
Membrane trafficking [BR:
grf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
141296000 (samd8)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAP2_C
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
141296000
NCBI-ProteinID:
XP_073683385
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All DBs
Position
21:16046017..16053656
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AA seq
446 aa
AA seq
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MWLEITRQGCRALWRGFLTQLDNLNNHTDKQGMPSSRYIGVDSWSTKQVAGWLRDQGFRE
YVDLLCSKHRLDGVSLLCLTETDLRSPPLELKVLGDIKRLMLAVRRLQRQYTSVTDSGLE
VSAFSLINTGGTDRVISKGFAERGSGDHQHCNGSVTTVGGEHSYSNGKRKQYCGRLDPEY
WKTALSALYAMLVCGVTSFVMVLVHERVPDMRTYPPLPDIFLDSVPRIPWAFSMAEACAV
VLGSILMLVLLMHKHRSILFRRLCNLTGTVFLLRCVTMFVTSLSVPGHHLQCSGKIYGDA
WAKVLRALEIWSGFGMSLTGVHTCGDYMFSGHTVVLTMLNFFVTEYTPRNWNFIHTMSWV
LNLFGIFFILAAHEHYSIDVFIAFYITTRLFLYYHTLANTQAYQHSRRARIWFPLFSFFE
CNVTGPVPNEYGWPFSKPAFMRMLLG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcgagatcacaaggcagggatgtcgagctctttggcgaggatttttaacacaa
ctggataatttaaataaccacacggacaaacagggtatgccgagctccaggtacattggt
gtggacagttggagcactaagcaggtcgctggatggctcagagatcagggttttcgtgaa
tatgtggatctcttatgctctaagcaccgtctggacggtgtcagcctgctttgtcttact
gagaccgacctaaggtctcctccactggagcttaaggtgctaggtgatatcaagagattg
atgttggctgtgcggaggctacagagacaatacacatccgtcactgactcagggttagag
gttagtgcgttctctctaataaacactggaggaacagaccgtgtcatctctaaaggcttc
gcagagcgaggatcaggagaccaccaacactgtaatgggtcggtcactacagttggtggg
gaacacagttactcgaatggcaagcgtaaacagtattgtggacggttggatccagagtac
tggaagaccgcactcagcgcactgtacgccatgctggtgtgcggagtgacttcattcgtc
atggtgctagtgcatgagagagttcctgacatgaggacttacccgccacttccagacata
tttctagacagtgttcccagaattccctgggccttctccatggctgaagcatgtgcagtg
gtgttgggttccatattaatgctggtgttgttgatgcacaaacacaggtcgattttgttt
cgcaggctgtgtaatttgacaggcactgtgttcttgctccgctgtgtcacaatgtttgtt
acttcactttctgtacctggtcatcatctgcagtgttcaggcaagatatatggtgatgca
tgggcaaaagtgctgcgtgcattggaaatctggagtgggtttggcatgtctttaactggc
gttcatacatgtggtgattacatgttcagtggacacactgtggttctcaccatgctcaat
ttttttgtcactgaatacacgccacgtaactggaacttcatccacaccatgtcttgggtg
ctaaacctgtttggaatcttcttcatcttggcggctcatgaacattactccatcgacgtc
ttcatcgcattctacatcaccaccagactgttcctgtactaccacacgttagcaaacaca
caagcctatcagcacagccgccgagcacgtatctggttccctctcttctctttttttgag
tgcaacgtgaccggacctgttccaaatgagtatggctggccgttctccaaacccgccttc
atgaggatgcttctaggatag
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