Garra rufa (doctor fish): 141296227
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Entry
141296227 CDS
T11039
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00562
Inositol phosphate metabolism
grf01100
Metabolic pathways
grf04020
Calcium signaling pathway
grf04070
Phosphatidylinositol signaling system
grf04081
Hormone signaling
grf04082
Neuroactive ligand signaling
grf04261
Adrenergic signaling in cardiomyocytes
grf04270
Vascular smooth muscle contraction
grf04310
Wnt signaling pathway
grf04371
Apelin signaling pathway
grf04540
Gap junction
grf04621
NOD-like receptor signaling pathway
grf04912
GnRH signaling pathway
grf04916
Melanogenesis
Module
grf_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
141296227
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141296227
04371 Apelin signaling pathway
141296227
04020 Calcium signaling pathway
141296227
04070 Phosphatidylinositol signaling system
141296227
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141296227
04081 Hormone signaling
141296227
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
141296227
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141296227
09152 Endocrine system
04912 GnRH signaling pathway
141296227
04916 Melanogenesis
141296227
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
141296227
04270 Vascular smooth muscle contraction
141296227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141296227
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
141296227
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
141296227
Endocytosis
Macropinocytosis
Phospholipase C
141296227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PLCB1-4-like_EFh
PLC-beta_C
PH_14
EF-hand_like
C2
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
141296227
NCBI-ProteinID:
XP_073683601
LinkDB
All DBs
Position
21:3394256..3443334
Genome browser
AA seq
1137 aa
AA seq
DB search
MRSRKRSRCRRREDLARWLEVWRSIRSSRSHVFTGKLRPETEFLDIATIRDTRAGKYAKL
PKHPKVRNVFNMDFPDSHHLAKALTIVTGLDTVNLTFHNFFAAKEVSQMWADDILAIAYN
TMRANACRQVFFEKLYVRLSLQTNKDGKIPVKNVFKMFPADKKRVEAALSAANLPKGKFD
TIKPEVFTEAAYKTFILSLCPRPEINEIFTSYTKGKGFMTKEMLTKFLNEKQRDSRLNEE
LFPPMRPDQVKNLIEKYEPSSSNASRGQISPEGLMFYLMGSETSVVKLDKLAQSHDMTQP
IPHYFVKSSHNTYLTAGQLTGVSSPEMYRQCLLAGCRCLELDCWKGKPPDEEPIITHGFT
MTTEILFKDVIEAIAESAFKTSKYPVVLSFENHVDSVKQQEKMASYCRTIFGDALLVDIL
DKYPLKPGHPVPSPSELMGKILIKNKKSSAPPSKPEPAKKAPGPEQTNGPTEDSESSQPA
DPNQPAPANPEDDREEHDDHDEQDEEKMKNSDEGTAGQEVTAYEEMSALVNYVQPNKFIS
FENAAKKNKSFVISSFVETKGESLIAKNAVDWVEYNKRQMSRIYPKGTRVDSSNYSPQPF
WTAGCQFVALNYQTMDFPMQLNMALFEFNGRTGYILKHDVLRRSDKKFDPFTDRIDTIIA
STLTIKIYSGQFLSEKSVKTGVEVELIGLPKDPKRKFRTKWTTTPNAINPEWNEEPFVFE
KILLPEMAYLRLVVQEEGGKFLGHRIIPLDALQTGFQHICLRSESNMPLTLPSIFVHIEV
KDYIPAAFADFSDALFNPVKTSKPPKTESSTYVCEYELPLADGAQAAATPAPAAEPKAAE
EAPAASEAPAEGDAAPPAEQAPESPKPEETPEPEPKPEEKTEPEPKPEEKTEPEPKPEEK
TEPEPQPEPEPEPKPEEKTEPEPETKLEETPEPAAAADAVVTETKESTEETPSDPSDPTT
VTCDELQQHKNFQKVSKKQEKDMKDMEKKFQKKREELIQKYSDQFKALKKKNTGKKSGDD
PSDQMNELKQKLKSELRALLVEQHDQIKKKKEQNNTERLTKLLEMATEKHCSEIKALNSE
SKKKDKMKKCKSTEQLDNESSDNGSTDGSPQEQSLRKKQAATLASIRELISQVNRLN
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcaggaagaggagccgctgtaggaggagggaggatctggccaggtggctggag
gtctggaggagcatcaggagcagcagatcgcacgtgtttacagggaaactgaggccggaa
actgagtttttggatattgccaccatcagagacacaagagcaggaaaatatgccaaactc
cctaaacatccaaaggtgcgtaatgtcttcaacatggattttcctgacagccatcatctg
gccaaagcgctgactatcgtgacaggccttgacaccgtcaacctcacctttcacaacttc
tttgctgctaaagaagtgtcccagatgtgggctgatgacatcctggctattgcatataac
acaatgagagcaaacgcctgcagacaggtcttctttgagaaattgtatgtccgcctctct
ttgcagaccaacaaagatggaaaaatacctgttaaaaatgtcttcaagatgtttccagca
gacaagaaaagggtggaagctgctctgtccgcagcaaatctcccaaagggaaagtttgac
accattaagcctgaggtgttcactgaagcggcgtacaagaccttcatactcagtctgtgt
cccagacctgaaatcaatgaaatcttcacgtcctacaccaaaggaaagggtttcatgacg
aaggagatgttgaccaagttcctgaacgagaaacagcgggattcccgtctcaatgaggag
ctgtttccacccatgagacccgatcaggtgaagaatctcatcgagaaatatgagccgagc
tcatccaacgccagccgcggtcagatttctccagagggtttgatgttttacctgatggga
tcggaaacatcggtggtgaagctggacaaactggcccagagtcatgatatgacccaacca
atcccacattacttcgtcaaatcctcccacaacacctatctcacagcggggcagctgacg
ggagtctcgtctcctgagatgtaccgccagtgtctcctcgctgggtgccgctgtctggag
ctcgactgctggaagggcaaaccgccggatgaagagccaatcatcacccacggcttcacc
atgacaaccgagatcctcttcaaggatgtgattgaagcgatcgctgagagtgccttcaaa
acgtccaagtaccctgtcgtcctgtcatttgagaaccacgttgattcagtgaagcagcag
gagaaaatggccagctactgcaggacaatctttggagacgctctgctcgtcgacatactg
gacaaatatcctctcaaaccgggtcacccagtgccgagtccatctgagctgatgggaaaa
atactgatcaagaataagaaaagcagcgcacctcccagcaaaccagaaccggccaagaaa
gcacctggaccagaacaaacaaacggacctacggaggattctgagtccagccaacccgcc
gatccaaaccaacccgctccagcaaacccagaggatgaccgtgaagaacatgatgaccat
gatgaacaggacgaagagaagatgaagaactctgatgagggaactgctggacaggaagta
actgcctatgaagagatgtcagctttggtcaactacgtacagcccaacaaattcatctcg
ttcgagaacgcagccaaaaaaaacaagagttttgtcatctcttccttcgtggaaaccaaa
ggagagagtttgatcgctaagaacgctgtggactgggtggaatataataagaggcagatg
agtcgtatctaccctaaaggaacccgagtggactcatcaaactacagtccgcagcccttc
tggaccgctggctgccagtttgtggcgctcaactaccagactatggatttccccatgcag
ctgaacatggctctgtttgagtttaacggcaggacgggttacatcctcaaacacgacgtt
ctccgtcgcagcgacaagaagtttgatcccttcactgacaggattgacaccattatcgcc
agcactctcaccataaagatttactccggtcagttcctgtcggaaaagagcgtgaaaact
ggagtagaggttgagctcatcggtttgcccaaagaccccaaacgcaaatttcgcactaaa
tggaccacaacacccaacgccatcaaccccgagtggaacgaggagcctttcgtcttcgag
aagatcttgctgccagagatggcctacctcagactcgtggttcaggaagagggcggaaag
ttcttaggtcaccgaatcatccctttggatgctctccagacaggttttcagcatatctgt
ctgcgcagcgagagcaacatgccgctcacgctgccgtctatatttgtgcacatcgaggtg
aaggattacatccctgctgcgttcgccgatttctcggatgcacttttcaatccagtgaag
acttcaaagccaccgaagactgagagttcaacatacgtttgtgagtatgagttacctctc
gctgacggcgctcaggcggcggccactcctgcacctgccgcagaaccgaaagctgcagaa
gaagctccagctgcatcagaggctccagcagagggcgacgctgcacctccggctgaacag
gctccagaatcacccaaaccagaggaaacaccagagcctgaacccaaaccagaggaaaaa
acagaacctgaacccaaaccagaggagaaaacagaacctgaacccaaaccagaggagaaa
acagaacctgaaccacagccagagccagaacccgaaccaaaaccagaggaaaaaactgaa
ccagaacctgaaactaaattagaagaaactccagaacctgctgcagctgcagatgctgtc
gtcactgaaactaaagaatccactgaggaaaccccatctgatccatcagatcccaccact
gtgacctgtgatgaactgcagcagcacaagaacttccagaaagtctctaagaaacaggag
aaagacatgaaagacatggagaagaagtttcagaagaaacgagaagagctgattcagaaa
tacagcgaccagttcaaagccctgaagaagaagaacacgggcaagaagtctggagatgat
ccaagtgatcagatgaatgaactcaaacagaagctgaagtcggagctcagggcgctgctg
gtggagcaacacgatcaaatcaagaagaagaaagaacaaaacaacactgagcgtttgacc
aaactcctggaaatggccacggagaagcactgcagtgagatcaaggccctcaacagtgag
tccaagaagaaagacaaaatgaagaaatgcaaaagtacggagcagcttgacaatgagtcg
tcagataacggcagcactgatggttcaccgcaggaacagagtctgaggaagaaacaggct
gctacgctggccagcatcagagaactcatcagtcaggtaaataggttaaattga
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