Garra rufa (doctor fish): 141297322
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Entry
141297322 CDS
T11039
Symbol
sox9a
Name
(RefSeq) transcription factor SOX-9a
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141297322 (sox9a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141297322 (sox9a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Gam
Motif
Other DBs
NCBI-GeneID:
141297322
NCBI-ProteinID:
XP_073683823
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All DBs
Position
22:complement(2190756..2193930)
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AA seq
465 aa
AA seq
DB search
MNLLDPYLKMTDEQEKCLSDAPSPSMSEDSAGSPGSGSGSDTENTRPAENSLVAPDGTLG
EFKKDEDDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAA
RRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRR
KSVKNGQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPSEHSGQSQGPPTPPTT
PKTDAQPGKVDLKREARPLQESTGRPLNIDFRDVDIGELSSDVIETFDVNEFDQYLPPNG
HATNASYVGGYATWMAKPQNGSSPSAQLTPLGTGAAGEQEQPRTTHIKTEQLSPSHYNEQ
QQGSPQHVSYGSFNVQHLQHYSTSFPSITRAQYDYSDHQGGANSYYTHAGGQSSGLYSTF
SYMSSSQRPMYTPIADSTGVPSIPQTNHSPQHWDQQPVYTQLSRP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactagacccctacctgaaaatgacagatgagcaagagaagtgtctgtctgac
gcccctagtccgagcatgtccgaggactccgcgggctccccgggctccggctcgggctcc
gacacggagaacacccgcccggccgaaaacagccttgtggctccggacgggacgctcggc
gagttcaagaaggacgaagacgacaagttcccggtgtgcatccgagaggcagtgtctcag
gtgctgaaagggtacgactggacactcgtgcccatgccggtgagagtgaacggctcgagc
aaaaacaagccacacgtgaagagaccgatgaacgcgtttatggtgtgggcgcaagcggcg
cggaggaaactcgcggatcagtacccgcacctccacaacgccgagctcagcaaaactctg
ggcaaactttggagattgctgaacgagggtgaaaagcgtcccttcgtggaggaggctgag
cgcctcagggttcagcacaagaaagatcaccccgactacaagtatcagccccggcggagg
aagtcagtgaagaacggccagagcgagtctgaggacggcagcgagcagactcacatctcc
ccgaatgccatcttcaaagccctccagcaagctgactcgcccgcatccagcatgggagag
gtgcactcgcctagcgagcactcaggccagtcccaagggccgcccactcctcccaccacc
ccaaaaactgacgcgcagccaggcaaagtggatctgaaacgagaggcccgtccgcttcag
gaaagcacgggacgtccgctcaacatcgacttccgcgatgtggacatcggcgagctcagc
agcgacgttatcgagaccttcgacgtcaacgagtttgaccagtacctgccgccgaacggc
cacgccaccaacgcgtcctacgtgggcggctacgccacctggatggcgaagcctcagaac
ggcagctctccgagcgcccagctgaccccgctggggacgggcgccgccggggagcaagag
caaccgagaacgacgcacatcaaaaccgaacagctcagcccgagccactacaacgagcag
cagcagggctcgccacagcacgtcagctacggctccttcaacgtccagcacctccagcac
tacagcacttcgttcccgtccatcacccgggcgcagtacgactactctgaccaccagggc
ggcgccaactcctattacacccacgccggaggccagagctccggcttgtactccaccttc
agctacatgagctccagccagaggcccatgtacacacccatcgctgactctaccggggtt
ccttccattccccaaaccaaccacagtccccagcattgggaccagcagccggtctacacg
cagctgtccagaccctga
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