Garra rufa (doctor fish): 141297435
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Entry
141297435 CDS
T11039
Name
(RefSeq) polycystin-1-like
KO
K04985
polycystin 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141297435
04812 Cytoskeleton proteins [BR:
grf04812
]
141297435
04040 Ion channels [BR:
grf04040
]
141297435
04091 Lectins [BR:
grf04091
]
141297435
Cilium and associated proteins [BR:
grf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
141297435
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
141297435
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141297435
Lectins [BR:
grf04091
]
C-Type lectins
Others
141297435
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD
REJ
PKD_4
PLAT
Lectin_C
PAPPA
GPS
Motif
Other DBs
NCBI-GeneID:
141297435
NCBI-ProteinID:
XP_073683972
LinkDB
All DBs
Position
22:19256077..19286637
Genome browser
AA seq
3248 aa
AA seq
DB search
MANIMHLPLIWILCVFTSCFSEHYCPKGAKIDRDGLRCYWMPTFKSTWLEAKGICQRDVR
GDLAMVDSVTVQTFIQNSFQLEGVWLRNGMAQDPFDDLDSEDSEMKECTSMALASGQWMN
EQCNKGNFIICEKKISVSLPSLESYVTGVPLMSGVYTVSQIQLLPSPPDPGTQMVEIMLF
PGLWFSHEGRVVSLDLVMQPSDQLTFARVQILRPYCSPSHHLVPPGCSSLLNPFSCCLLT
PMCNTTGGCATGQYWCHLLETCLPITSPCSPYHSINGGHVFPLPPRYPATPPFFHLMADM
SLTLTPSTEHTHISVIVQDKQITVYPDDILALQHTRRAGKFLHCVGGTNSSWRQSYLSLH
GPEWGGWLEGALSAQPGQGQWLDEQVCDLRVIYEDTMPHFGVSPVPSTSQSNSPIKVKSP
VTGLQVLYPKLDKDNQMHVAVNVPTLIVIQIISGENTTSFWSDPVSKNGVPFVSSCPAEM
PESEEGCVRASLDMWFSHVYMKLSSQGEHILNITASNSVNSQTLSMRVVSHIPVTGLRIQ
PQGFRRVLVDIPQLFTASVVTGSSVKYTWVIDDLVHFPHTGESYSVVFKKPAEYKLKVMA
NNPVSSELIEVKLTADVMTPLADLAVISMPEAIAVNTSTRYTIRVKADISIGVTIRWDFG
DNTASVSHPVSAPLEMEESYLHQSAKHVYLQDSIDHTFPFPGDFTLKIKAYNQYDQIETF
VAVKIRTPISRLLVSSSPIACQINHTILFEVSLWPSSYGVIYLWNFGDDSDQVKEYISKV
SHVFKRPGTYNVTICANNSLSVLTNSTTVEVVEAVSGLQLYYNSSTELNSTFEISGRVSA
GTHLKWTFDFGDGSEVKDNTGSSASHIYRSFGNYTVQVTVYNSVSKEHQLVSVEVFHLLI
SKIIPTDCIVSKTETNFEVFVKGHVAFLTFDWDFGDGTPLSVVKGARTITHTFLTSGMYT
VGVNVRSLVASSHYETSICVETQITYVTLHSAKSAVAVNEEMCFEVAVLPKVADYQFWWY
NNLSSDLLPVKGLSHHCFVFQEEGLYEISVQVHNKVSSGTAKATISVQRPVSNLCIKYEG
NHDAMTVNQSYYFWAELPGKIASFQWDFGDGFKKEGQNQSHVFCFPGRFRVTVMASNEIN
SDSVFVEIEVQAPLSYIVVNTSQPFAEAGKEILLTAQTDVNENVVFYWTVNPSSPPKLGT
SRFMPVFPKPGVFQIKVTAQNLISRVESVTHIEVVQRIHKVRIQSQGLQNARYFLTNQTV
LLTASVTCGSNLTYEWTANQRMASNSKQFPLFTNSPGDIDIKLVVSNVFGSVDTDLSLRA
VELVSGLSISSPTNAVAKGKPVTISASVTSGTDLSYSWFLESERSPVISDVPFVLHVFKV
VGVVKIKVSVSNMFGSEDATKQLIIQENISKVDFQINGQFRPFFVASNNLLLINGSRGTG
NVLHWEWVLLFHNRTVMALADNQTVSCSFADVGDHRISLNASNDISWQTVSYTITVQDAI
QGLLLIASSDVVCENDPVTFTPSVFQGSEVSFSLEFVNASYSVDIWQNFTTSSLSVGNHL
IRATATNHVSYQSATVIVRVVERIKGLHLIGCCSAVLEASKNISFQASSGSQANYRWTFL
LNGVRSSWEIGQNVHFTPFTNGSLSVTVEADNGFCSQSLTSTATIQKHVKKVKLFTSNDG
AFIDYPIIFVAITDGGSNLKFLWDFGDGNDGDLVTESNRQVHKYNVTGEFVVKLTAFNNI
SEVSTEMTVEVQKLECTQPHIYVVKEHYKILKSRPSSFEARVDFNGCVTHKAYYSWEIFR
GLDCSEMDKVSLNDSVDVTTLLLSLPKHALKVGNYCLTFTARLLGTPLQQNRTMQLSVVH
SELVPVIKGGSHRFWSSQYDLILDASESFDPDSEKNDIELFLFQWGYTIENTTELSSAVS
TRHQHIPGNGSLLILPRSELLPDRMYHFTLTLYKSGRQPVSVSQLVTVCSTSLLPVTVKC
VSCNSLLSFHVSHGHYVRLAGHCSSCQDTVQYRWTAKNQKGEALTLNEVTTSTGRLGREI
VIKPGVLMEVQKYTFTLNVSDPASGLWGSASITLVPNHPPYGGVCTLSPNDSLHFLETMV
SYSCSGWMDDDGDSAQLIFSLQVAQCEDFGPLCPLITLYRGTQSTFSSLVPLGSLSTAEN
VSVIHVLVLVEDSMGASVIAERKNLTVLLTDQCTMEWLRNKSQSELWALRQQGNPQDIIQ
YSIALSSQLNQLASINAQELEDKIQIRGNVIQALAFLPVSSYQDAALISSALAQSTVVPS
EVQCNGCRAKVLKVTEKMIKVMREQTGQGDIDPTDTGRNILAVLSSTLTADQRQRNNSGL
KHVDTSETAVSALGQIFELMRSLMLLRMSGEEALSLAVPKITAVGVRGDPTKDLLCTDPL
SHCQFHIPSALSSQLKEGKQEVLQILLQMEGEENPLIPAAEPPISTTLAAMEFATPQGQP
ISIANLTLDTAIQFTLHKKVQEMEDERLLWKHFTLPPKGSVNFTVKAMDMDHQTGLYVAL
NFSLIPGAGEEASGLVWISVDDQPVHPLSEHTHFEEFTLSLSAGTPSLEHTIFLTPLLNG
SAKDLFVKLNSSISGVDVSVSVCVFSMLCQFFSVDERRWSSDGLSPLSGSSPHTAHCLTH
HLTMFGASLFIHPEALLLLPPSEEPVRNVVVGIVCGVILLIHLLVGLIAHKLDHLESYRL
SWVPLCGQKGCYQYRVLVKTGWKRGSGTTAHVGISLYGLNKSGSRHLQREGAFQRNSLDD
FQVETDANLGEIWKIRIWHDNTGLDPSWYLKHVIVWDIQTENMFFFLVEDWLSVENEKNS
GRVEKVILASCPQELQQFKRILHSQLLFGLREHHLWISLWERPSHSRFSRAQRVTCCALL
LHLYLAAGAVWYGAVGRKGSSGPVSTQMVMNAENILVGITVAALMFPLQTILRFLFQKTK
SKVTLEISLPPSPVSHTVEMDVFLSHPDLSCSSFLSLPTGPDSSIYDGPSPFTNSLQKLD
SEFWNTPDPGNERTDQWPSCDSIFGLPELTGTSHLLKRKKAILQLHLSTPTSDHDTLEPM
KSSEEDLRTISADLDPTNTLSLEPEASDSGHFTPNDTILSDIQDSLCSEWSDLSMDTPTS
EPGFHKSSSSLSVLSDASTFLPSLPPDSISTISNTRIGVVRGLPGLFLPSWVLRVIHLLV
VVLLGTCLSLVGLYGSRFSSSVVLINHSNNNSSSCCRTNASSLQTYVNKPTHNRYRLDLF
FAKLLCNC
NT seq
9747 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatattatgcacctgcctctcatttggattctctgtgtttttacaagctgcttc
agtgaacattattgcccaaagggggcaaaaattgaccgtgatggtttacggtgctactgg
atgcccacttttaaatcaacatggctagaagcaaaaggcatctgtcagagagatgtgaga
ggagaccttgctatggtggacagtgtgactgtacagaccttcatacaaaattcattccaa
ctagaaggggtctggttgagaaatggaatggcacaggatccgttcgatgatttagattca
gaggacagtgagatgaaggaatgtacttcaatggctttggcctccggacagtggatgaat
gaacaatgtaataagggaaatttcattatctgtgagaaaaagatatcagtgtctttgcca
tcgctggagagctacgtgacaggcgtcccactaatgtcaggcgtgtacacagtgtcccag
atacaactgctaccctctccaccagacccaggaacacaaatggtcgagattatgttgttc
ccaggtctttggttcagtcatgagggtcgagtcgtatcattagatttggtgatgcagcca
agtgatcagctgacctttgctagagtacaaatcttacgtccgtactgcagcccaagtcat
cacctagtaccacctggctgtagttctctcctgaaccctttcagctgctgtttactgacg
cccatgtgcaacactactggtggctgtgcaactgggcagtattggtgtcatcttctggag
acctgtctgcccatcaccagtccatgtagcccttaccactccattaacgggggtcatgtg
ttcccgttgcctccccgctaccctgcgacaccaccgttcttccacttgatggcagacatg
tcactgacactgaccccaagcactgaacacacacatatcagtgttatagtacaagacaaa
caaatcactgtctatcctgatgacattctggcattgcagcacactagaagagcaggcaaa
tttctacattgtgttggcggtaccaactcatcctggcgccagagttacctctctctgcat
gggcctgagtggggcggctggttagagggggctctgtctgcccaaccaggacagggccaa
tggctagatgaacaggtctgtgaccttcgggtgatttacgaggacacaatgccacacttt
ggagtttcacctgtacccagcacctcacagagcaacagtccaatcaaagtaaagagtcct
gtcactgggttgcaagttttatatccaaagcttgacaaggacaaccaaatgcatgttgct
gtcaatgtcccaactctcattgtcatccagatcatttcaggagaaaacacaactagtttc
tggtcagaccctgtgtctaagaacggagtcccttttgtatcttcgtgccccgctgagatg
cctgagagtgaagaaggatgtgttagggcatctcttgacatgtggttctctcatgtgtac
atgaagctttctagtcaaggagaacatatactgaacatcacggcttcaaacagcgtgaac
tcccagactctgagtatgagagttgtgtctcatattcctgtaactgggctgagaatccag
cctcagggcttcagaagagttctagtagacataccacagttgtttacagcttcagtagtc
acaggctcatcagtgaagtatacatgggttattgatgacctggtccactttccacacaca
ggagagtcttacagtgtggtttttaagaagccggcagaatacaagctgaaggtaatggca
aataacccagtgagctctgagttaattgaggtgaagctcacagctgatgtaatgacccca
ttagctgacctagcagtaatttccatgccagaggccattgctgtaaacacctcaactcgc
tacacaatacgagtaaaagctgacatctctataggcgttacaatcagatgggattttggt
gataatacagcatctgtcagtcacccagtttctgctcctttagagatggaagagagctat
cttcaccaaagtgccaaacatgtctatctgcaagactccattgatcatacatttcctttt
ccaggtgacttcacactgaaaatcaaggcttacaaccaatatgaccaaattgaaacgttt
gtagctgttaaaataaggactcctatatcaagactgttggtgtcatcatctcctatcgca
tgtcaaatcaatcacaccatcctctttgaggtctcactatggccctcttcatacggagtg
atttatttgtggaattttggcgatgactctgatcaagtgaaggaatatattagtaaagtc
agtcatgtttttaaaagacccggcacatacaacgtcaccatatgtgccaacaactccctg
tcggtcttgactaattctacaacagtggaggtagttgaggcagtctcaggtctccagcta
tattacaacagctccactgaactgaactccacttttgaaatcagtggcagagtatctgca
ggcacacatttaaaatggacctttgattttggagatggttcagaagttaaagacaacacc
ggaagctcagcttctcacatttataggtctttcggaaattacactgttcaggtaactgtg
tataattctgtaagtaaagaacaccagttagtcagtgtggaagtttttcatttgctgatt
agtaaaattattccaacagactgcattgtgagtaaaacagagaccaattttgaagtgttc
gtcaaaggacatgttgcatttttgacttttgactgggattttggagatggcacaccgttg
tctgttgtcaaaggagctagaacgattactcacacttttctaacttcaggaatgtacaca
gttggtgtaaatgttcgtagcctggtggcttcatcccattacgaaaccagcatatgtgtt
gagactcaaataacatatgttactctccattcagccaagagtgctgtagctgtgaatgag
gaaatgtgctttgaagttgctgtgcttcccaaagtagcagattatcaattttggtggtat
aacaatctttcaagtgatttactcccagtcaaaggcctgtcacaccattgctttgttttt
caagaggagggtttgtatgaaatttcagtgcaggtccataacaaagtcagcagtggaaca
gcaaaagcaaccatttcagttcaaaggcctgtatctaatctatgcataaaatatgaaggc
aaccatgatgcaatgactgtgaatcagtcctattacttttgggctgagcttcctggtaaa
atagcttcttttcaatgggactttggcgatggcttcaaaaaggagggtcagaatcaatca
cacgtattctgttttcctggaagatttcgtgtgacagtcatggcatctaatgagataaat
tcagattcggtgtttgtagagattgaagtgcaggcaccattgtcatacatagtggttaat
accagtcagccgtttgctgaggctggaaaagagatactgctaacagctcagaccgatgtt
aatgaaaatgttgtgttttattggactgtgaatccttcatcacctccaaaacttgggaca
tccagattcatgcctgtgtttcctaaaccaggggtgtttcagattaaagtcacagcacaa
aatcttatcagtcgagtagaatccgtaacacacattgaggttgtacagagaatacacaag
gttcgaattcaatctcaggggctacagaatgcaagatatttcttgacaaatcagactgtg
ctcttgacagcatcagtgacgtgtggttctaacttgacgtatgagtggactgcaaaccaa
agaatggcaagtaatagcaaacaatttccactctttacaaacagccctggtgacatagac
atcaagctggtagtatccaatgtttttggatcagtagataccgacctttcactgagagca
gtagagcttgtgtctggcctgagtatttcatcaccaacgaatgccgtagccaaaggaaag
ccagtgacgatatctgcaagtgtgacatctggaacagaccttagctattcatggttcttg
gaatctgagcgcagtcctgtaatatcagatgtgccttttgttctgcatgtatttaaagtc
gttggtgtggttaagatcaaagtgtcagtttcgaatatgtttgggtctgaagatgcaact
aagcaactaataattcaggaaaacatctctaaagtggactttcagataaatggacaattc
agaccattttttgtagcatcaaataacctgctgttgattaatggctctagagggacagga
aatgtcctgcattgggaatgggttttactgtttcacaatagaactgttatggctcttgca
gacaatcaaactgttagctgttcatttgcagatgttggagatcaccgtatctcccttaac
gcctcaaatgacattagctggcaaactgtttcatatactattacggttcaggatgccatc
cagggacttttacttattgctagtagcgatgttgtatgtgagaacgatccggttactttc
acaccatctgtcttccaaggaagcgaagtttccttttctttggagtttgttaatgcgagt
tattccgtggacatttggcagaattttaccacctcttctctttcagttggaaaccacctc
ataagagcgacagcaacaaatcatgtcagttaccaaagtgcaacagtgattgtcagagtt
gtggaaagaattaaaggcctgcatttgattggatgttgctctgctgttctggaggcatcc
aaaaacatcagttttcaagcgtccagtggttcacaagccaattaccgctggactttccta
ttaaatggagtccggtcctcttgggaaatcgggcaaaatgttcacttcacacctttcact
aatggatccctgtctgttacagtggaagctgataatggcttctgctcacagtccctgacc
agtacagcaacaatacagaaacatgtgaagaaagtaaagctttttacctcaaatgatgga
gcttttattgattatccgatcatttttgtagctatcacagatggaggcagcaatcttaaa
ttcctttgggattttggtgatggcaatgatggagacctggttacggaatccaatagacaa
gtccacaaatacaacgttactggtgagtttgttgtgaaattaacagctttcaataacata
agtgaggtctctactgaaatgacagttgaagtgcaaaagctggagtgtactcagccgcac
atctacgttgtaaaagaacattataaaatattaaaatccagaccaagttcttttgaagca
agagtggactttaacggttgtgttacacacaaagcatattattcctgggagatcttcaga
ggactagattgctcagaaatggacaaggtgtccttgaatgattcagtggatgtcacaaca
ctgcttctttctctgccgaagcatgctctcaaagttggaaactactgtctgacatttact
gccagacttctaggaactcctttacagcagaacaggacaatgcagctttctgtggtccac
agtgaattggtgcctgtgattaaaggcggttctcacaggttctggtcaagtcagtatgat
ctgattttggatgcaagtgagtcttttgatccagattctgagaagaatgatatcgagttg
tttctgttccagtggggttacactatagagaacacaacagaattgtcttcagctgtttcc
acccgtcatcaacatattccaggaaatggaagtctactgattcttcccagaagtgaactg
ctgccagacagaatgtaccactttactctcactctttacaaaagtggacgacagcctgtc
tctgtatcacagttggttacagtgtgcagtacctcattgctacctgtgactgtaaagtgt
gtctcctgtaattccctgctgtctttccatgtgagtcacggtcattatgttagattggct
ggtcattgttcttcatgtcaagacaccgtacagtacaggtggactgcaaagaatcagaaa
ggtgaagctctaacactgaatgaggtcactacctcaacaggaagactcgggagagaaata
gtcattaaaccaggggtgctaatggaggtccaaaaatacacctttactctcaacgtgtct
gatccagcctctgggctttgggggtcggcaagcatcaccttagtccccaaccatcctccc
tacgggggtgtttgcactctgtcacccaacgactcgcttcatttcctggaaaccatggtc
tcttacagttgctcagggtggatggatgatgacggtgactcagctcagctgatattttca
ctgcaggtggcacagtgtgaagattttggaccattatgtcccttgattaccctttacaga
ggcactcagagcacgttcagctccctggtgccactgggtagtctgagcacagcggaaaac
gtatctgttattcatgtgctggtcctggtagaggacagtatgggggcatcagtaatcgca
gagagaaagaacctgactgtgctgttgactgaccaatgcacaatggagtggttgaggaat
aagagccagtcagagttatgggccttgcgccaacaaggcaaccctcaggacattattcaa
tattcgattgccctgagcagccaacttaaccagctagcatccataaatgctcaagagctg
gaggacaagattcagatacgtggaaatgtcattcaggctctggcgtttctgccggtctcc
tcctaccaggatgcggctctgatcagctcagctttagcccagtctactgtggttccctct
gaagtgcagtgcaacggctgccgtgcaaaggtgcttaaggtcacagagaagatgatcaaa
gtgatgagagaacaaacaggacagggtgacatcgaccccacagacaccggcaggaacatt
ctggctgttttaagcagcacactgactgctgatcagaggcagaggaacaattcaggcctc
aagcatgtggatacatcagagacagctgtatcagcactgggccagattttcgagctcatg
cgttcattaatgctgttgcggatgagtggggaagaagctctttccctcgctgttccaaag
atcactgcggtgggcgtgcggggtgaccctactaaagaccttttgtgcacagatcccctt
agccactgccagtttcacatcccatcagcactgagctctcaactaaaggagggaaagcaa
gaggtcctgcagattcttctgcaaatggagggtgaagaaaacccattaattccagctgca
gaacctcctatatcgaccacgctcgcagctatggagtttgctaccccacaggggcagcct
atttcgattgctaacctgacactagacactgcgatacaatttactttacacaaaaaagta
caagagatggaagatgagaggctgctgtggaaacattttactttaccacccaagggaagt
gtaaatttcacagtcaaagcaatggatatggatcatcagactggcctctatgttgcccta
aacttcagcctcattccaggagcaggtgaggaagcctctggactagtatggatctctgta
gatgaccaaccagttcatccactgtctgaacacactcattttgaagagtttaccctctct
ctctcagctgggactccatcactcgagcacaccatcttccttacaccacttttgaatggc
tctgccaaagacctgttcgtgaagctgaacagtagcatcagtggtgtggacgtgtccgtc
tcggtgtgtgtgttcagcatgctgtgccagttcttcagtgtagatgagaggcgctggagc
agtgacggcttgagtcctctgagtggcagcagcccccacactgcccactgcctcacacat
cacctcaccatgtttggagccagcctcttcatccatcctgaagcacttcttctgctgcca
ccttcagaggagccagtgagaaatgtggtggtgggaatagtttgtggagtcatattgtta
attcatctgctggttggtcttatcgctcacaaactggatcacctcgaaagttatcgtctg
agttgggttcctctgtgtggtcagaaaggttgttaccagtaccgggttcttgtcaaaaca
ggctggaaaagagggtctggtactactgcacatgttggcattagcctgtatggcctaaat
aaaagtggctcacgtcaccttcaaagagaaggagctttccagaggaatagcctggatgac
tttcaagttgaaacagatgccaatctcggagagatctggaaaatacgcatctggcatgac
aacacaggtctagacccatcctggtacctaaaacatgtgatcgtctgggacatacagaca
gaaaacatgttcttcttcttggttgaagactggctatctgtggagaatgagaagaactct
ggaagggtggagaaagttattttagcatcttgtcctcaggagctccagcagtttaagagg
atcttacattcccagttactgtttggccttcgagagcaccatctgtggatttcattatgg
gaacggccgtcccacagccgctttagccgagcccagagggttacctgctgcgccctctta
ttacatctctatctggcagctggggcagtatggtatggagcagtgggcagaaagggcagc
agcggtccggtctctacccagatggtgatgaatgcagagaacattctggttggaataaca
gttgcagctttgatgttccctctccaaaccattctcagatttctctttcaaaaaaccaag
agcaaggtgacattggagatatcgctgcctccctctcctgtgtctcataccgtggagatg
gatgttttcctcagtcacccagatctctcctgttcatcttttctgtcactgccgacaggc
cctgactcttccatctatgatggaccgtctcctttcactaattccctgcagaaactagac
tcagagttttggaatactccagatcctgggaatgaacgaactgatcagtggccatcatgt
gacagtatatttggcctgcctgagctgacaggaaccagtcaccttctaaagagaaaaaaa
gccattctacaattacatttgtcaactccgacctctgaccacgacaccttagaaccaatg
aagtcttcagaggaagatcttaggactatatctgcagacctggatcccacaaacacgctt
tcccttgagcccgaagcatctgacagtggccatttcacacccaacgacaccatcctgtct
gacatccaggacagcttgtgtagtgagtggtctgatctgagcatggatacgcctacatct
gaacctggctttcacaagtcctcctcctcactctcagtgctcagtgatgccagcacattt
ctccctagtctcccacccgactctataagcaccatttccaacacacgcattggtgttgtt
cgcggtctacctggcttgtttcttccatcatgggttttgcgtgtgattcacctgctggtg
gttgttttgctgggaacatgcctatctctggtgggactgtatgggagcaggttttccagc
tctgtggttctcatcaaccacagcaacaacaacagcagcagctgctgcagaaccaacgca
agttccctccaaacatacgtcaacaagccgacccacaacaggtaccgccttgacctcttt
ttcgctaaactactatgcaactgttaa
DBGET
integrated database retrieval system
