Garra rufa (doctor fish): 141297436
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Entry
141297436 CDS
T11039
Name
(RefSeq) probable endonuclease 4
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
141297436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141297436
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
141297436
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
141297436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
141297436
NCBI-ProteinID:
XP_073683973
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All DBs
Position
22:19416590..19426713
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AA seq
395 aa
AA seq
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MASRRKGQKKKTTEEITETRELQHSDAEPSEEKMAQKRKIKPKKKYIGAHVSMSGGIWKA
VESSVAMGGHAFALFLGSQRSWTRPALDTAAAVKFQEACVQHGFDPMHILPHGSYLMNCG
SPKEDVFSKSQAMLVDELSRCSALGLSQFNFHPGASIDSTPEKCMEKIAQAINHAHQQTP
AVITVLENMSGQGSTIGGQFSELRSIIDRVRDKTRVGVCLDTCHAFAAGYDISPPGGVKN
VLDEFDRVVGLHYLRAIHLNDSKGKLGCHLDRHEDIGRGQIGISAFREIVNEPRLDNMPL
ILETPGRNFPEWWLGIEPRSDRPVHTAAQRPQAPAWSSKSPVALESIAAYIEWVLVSRTS
WAAEDDTRPTPDPEPSPPRLAEPEPEPTADGEPKP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgaagaaaaggccagaagaaaaaaacaacagaggagattacagaaacaagg
gagctacaacattctgatgcagaaccatcagaagaaaaaatggcacagaaaaggaaaata
aagccaaagaaaaaatacataggtgctcacgtctcaatgtcaggaggaatatggaaagca
gtcgaatcaagtgtggccatgggagggcacgcttttgcccttttcttgggctcccagcgc
tcctggacgagaccagcccttgatacagcagctgcagttaaatttcaagaagcatgtgtt
caacatggctttgatccgatgcacattctaccacatggatcttatttgatgaactgcggt
tcccccaaagaagatgtgttcagtaagagccaggccatgcttgtggatgaactgagtcgc
tgcagtgcactgggcctcagccagtttaactttcaccctggagcttctatagactccacc
cctgagaaatgcatggagaaaattgcccaagctatcaaccacgcacaccagcaaacccct
gctgtcattacagtacttgaaaacatgagcggtcagggcagcactataggtgggcagttc
agtgaactgagaagcataatagaccgggtgcgtgacaagacacgtgttggggtgtgtctg
gacacttgccatgcttttgcagcaggctatgacatttcaccacctggaggagtgaagaat
gtgcttgatgaatttgaccgtgtggttgggttgcattatttgagagccattcatttaaat
gactctaaaggaaaattaggctgccatctggaccgccatgaagacattggacgtggccaa
ataggcatttctgctttccgagaaattgtaaatgagcctcgactggataatatgcctctg
attctggaaacacctggtcggaattttccggagtggtggttgggcatagagccacggagc
gacaggcctgtacacacagcagcccagcggccacaggctccagcctggtcctccaagagc
cctgttgctctggagagcatcgctgcctatattgaatgggtgctggtgtccagaacgtcg
tgggctgcagaggatgacaccaggcccactccagacccagagcccagcccaccccgactc
gcggagccagagcctgagcccaccgcagacggcgagcctaagccctaa
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