KEGG   Garra rufa (doctor fish): 141297436
Entry
141297436         CDS       T11039                                 
Name
(RefSeq) probable endonuclease 4
  KO
K10771  AP endonuclease 1 [EC:3.1.11.2]
Organism
grf  Garra rufa (doctor fish)
Pathway
grf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    141297436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:grf03400]
    141297436
Enzymes [BR:grf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     141297436
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     141297436
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-GeneID: 141297436
NCBI-ProteinID: XP_073683973
LinkDB
Position
22:19416590..19426713
AA seq 395 aa
MASRRKGQKKKTTEEITETRELQHSDAEPSEEKMAQKRKIKPKKKYIGAHVSMSGGIWKA
VESSVAMGGHAFALFLGSQRSWTRPALDTAAAVKFQEACVQHGFDPMHILPHGSYLMNCG
SPKEDVFSKSQAMLVDELSRCSALGLSQFNFHPGASIDSTPEKCMEKIAQAINHAHQQTP
AVITVLENMSGQGSTIGGQFSELRSIIDRVRDKTRVGVCLDTCHAFAAGYDISPPGGVKN
VLDEFDRVVGLHYLRAIHLNDSKGKLGCHLDRHEDIGRGQIGISAFREIVNEPRLDNMPL
ILETPGRNFPEWWLGIEPRSDRPVHTAAQRPQAPAWSSKSPVALESIAAYIEWVLVSRTS
WAAEDDTRPTPDPEPSPPRLAEPEPEPTADGEPKP
NT seq 1188 nt   +upstreamnt  +downstreamnt
atggcctcacgaagaaaaggccagaagaaaaaaacaacagaggagattacagaaacaagg
gagctacaacattctgatgcagaaccatcagaagaaaaaatggcacagaaaaggaaaata
aagccaaagaaaaaatacataggtgctcacgtctcaatgtcaggaggaatatggaaagca
gtcgaatcaagtgtggccatgggagggcacgcttttgcccttttcttgggctcccagcgc
tcctggacgagaccagcccttgatacagcagctgcagttaaatttcaagaagcatgtgtt
caacatggctttgatccgatgcacattctaccacatggatcttatttgatgaactgcggt
tcccccaaagaagatgtgttcagtaagagccaggccatgcttgtggatgaactgagtcgc
tgcagtgcactgggcctcagccagtttaactttcaccctggagcttctatagactccacc
cctgagaaatgcatggagaaaattgcccaagctatcaaccacgcacaccagcaaacccct
gctgtcattacagtacttgaaaacatgagcggtcagggcagcactataggtgggcagttc
agtgaactgagaagcataatagaccgggtgcgtgacaagacacgtgttggggtgtgtctg
gacacttgccatgcttttgcagcaggctatgacatttcaccacctggaggagtgaagaat
gtgcttgatgaatttgaccgtgtggttgggttgcattatttgagagccattcatttaaat
gactctaaaggaaaattaggctgccatctggaccgccatgaagacattggacgtggccaa
ataggcatttctgctttccgagaaattgtaaatgagcctcgactggataatatgcctctg
attctggaaacacctggtcggaattttccggagtggtggttgggcatagagccacggagc
gacaggcctgtacacacagcagcccagcggccacaggctccagcctggtcctccaagagc
cctgttgctctggagagcatcgctgcctatattgaatgggtgctggtgtccagaacgtcg
tgggctgcagaggatgacaccaggcccactccagacccagagcccagcccaccccgactc
gcggagccagagcctgagcccaccgcagacggcgagcctaagccctaa

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