Garra rufa (doctor fish): 141297460
Help
Entry
141297460 CDS
T11039
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
grf Garra rufa (doctor fish)
Brite
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141297460 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
Agenet
zf-MYND
Motif
Other DBs
NCBI-GeneID:
141297460
NCBI-ProteinID:
XP_073683993
LinkDB
All DBs
Position
22:complement(27530445..27542055)
Genome browser
AA seq
1183 aa
AA seq
DB search
MNRAFTQTLMRPNLPLRRPATGPSSLSPRGPAPTFHELAQENLLASDILDGPMGDGVKKE
NVISAKNAQNCGDFMSPPQTPGSMVSPLVKLCNYCSHQGNFRCTRCKKTCYCSVACQTQD
WKAHRHVCKPSIQEIASEKTKESTPMPSGNGLGGLQAKEICVDVQPKRMFRRDLRKNVVS
KGSEIQGTVIDLRNPGEFSVHLQSVEMMESLKNITKELQKTYSTSFAAEYKPEIGELCAV
KFSLDRNWYRAEVQSVDVARRVASVFYIDFGNEENVTLDNIRPLSEIIDAAPPFALQCCV
AGVKPLTGSWTGECSIAVRQLIAGKSLTFTVLDIMNDGALLAVDVPLSTLGKYMSTFLIE
QGYAVEEDITVKPQTEHDINSLMTASFENFKRLSGGKNENSEARPPEPLTQGVGDTFTAI
VTHLQSPSEILCQKLENASIIQQLQMSLREHCSKTPASENFRPAPGTVCCSLFSEDNQWY
RAKVLAYSSEDRVCVGYIDFGNSEEVELNRLRPISKDLLALATQAIPCSLSGIKSPTGTW
SEEVILMVKRLVCNRFIRVEILGKKDGRALVSLIDESSDPQTNAAEVLVNMGYATKESVE
TEKNEPTQASFPDMPPLGPPVTEKMEWTCAELPFDGQKVELIISSLKSLDEFYCYNYSKA
DAHILTELSYELMKHCESERASFTPTVGEPCCALFTGDARWYRAMVLEVFGEGKARVYFV
DYGNSCEVEAAHLKAIIPSLLKLPFQAIRCWLAGVEPVEGQWNKEAVHKFQALCAGQPLS
GKVLSITEKGYGVELESAGKSIAAVLISEHLAKPYGQVKPPPVQPAKPTNQIEDLPTLKP
IDQNPPAEEPLKVNKGAANDKKDSTSSSGSFPLNWKTLELSCTDTFQPRVAAVISPSLFY
IMNPGQVNVEGLKAVMTDVAKYCSKQPIPNQCHPLPGAACCAQFSGDKNWYRAVVLEVTT
KHAHVIYADYGNMETVPVSSILPITKELLQHPFQIVRCSLAGKENFPTVWPTEVLELFGI
QLSGGVLASLQGFDGTANLLTLTQQSGQADRDINSIILGALQKGPSRTNSKPPAIVVEEK
KDVDQRKTQTVSSTKAADQPQSADVKKPDLKDQALPLSPSYRLEKPENTSKTVNTVECTE
PRTITSPKDSNAPQTCCCLELKQKIDHIEKLILLLVKQVGGTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgagccttcactcagaccctgatgagacctaatctccctttgaggagacctgcg
actggaccaagttcactttctcctagaggcccagcaccaacatttcatgagcttgctcaa
gaaaatcttctagctagtgacattctggatggtcctatgggtgatggagttaaaaaggag
aatgtgatttctgcaaaaaatgctcagaattgtggagattttatgtctcccccacagaca
ccagggtctatggtgagcccactggtaaagctgtgcaattactgcagtcaccagggaaac
ttcaggtgcactcggtgtaaaaaaacatgctactgttctgtagcttgtcagactcaggat
tggaaagctcatcgacatgtctgtaaacctagcattcaggaaattgccagtgagaaaact
aaggaatccacacctatgccaagtggaaatggacttggaggccttcaagctaaggaaatt
tgtgttgacgtacagccaaagagaatgtttcgacgtgatttgcgcaagaatgttgtttct
aagggatctgagatacagggtacagtgattgacctgaggaaccctggggaattctccgtt
cacctgcagtcagtggagatgatggagtccctgaaaaacatcaccaaagagctccagaaa
acttatagcacttcatttgctgctgagtacaagcctgaaattggggagctctgtgctgta
aaattttctcttgatcggaactggtatcgagctgaggttcagtcagtcgatgtggcccgc
agagttgcaagtgtgttttacatcgactttggaaatgaggagaatgtaacccttgacaac
ataaggcctctctctgagatcattgatgctgcaccaccatttgctttgcagtgttgtgtt
gctggcgtaaagcctctgacaggaagttggacaggcgaatgctctattgctgttaggcag
ttaattgcaggaaagagtctgactttcacagtgttggatatcatgaatgatggagctctg
cttgctgtggatgttcctctaagcactcttggtaaatacatgagcactttcctgatagag
cagggctatgctgtagaggaggacattactgtcaaaccacagactgaacatgacatcaat
tcattgatgacagcatcctttgagaacttcaagcgcttgtctggaggaaagaatgagaac
tctgaagccaggcctccagagccgctgactcaaggagtgggtgacacattcactgctatt
gtcacccacctccagtctccctcagagatcctctgtcaaaagcttgaaaatgcgagtata
atccagcagttgcagatgagtttaagggagcactgctcaaaaactccagccagtgagaac
ttcagacctgcaccaggaactgtctgctgctcactcttctctgaggacaaccaatggtat
agagctaaagttctggcatattcctctgaagatcgtgtgtgtgttggatacatagatttt
ggcaactctgaggaggttgaattaaatcgcctacgaccaatcagcaaagatttgctggct
ttggcaactcaagcaatcccttgttctctgtcaggtataaagtctccaacaggcacctgg
tctgaagaggtcattttgatggtgaaacgactggtttgcaaccgtttcattcgtgttgag
attctgggtaagaaggatggtagggctttggtgtccctgattgatgagtccagtgaccct
cagaccaatgccgctgaggtgttggtaaacatgggttatgctactaaagaaagtgtggag
actgagaagaatgaaccgactcaagcctccttccctgacatgcctcccctcggtccacct
gtcactgagaaaatggaatggacttgtgctgaacttccctttgatggccaaaaggtggag
ctgatcatcagcagtctgaagagccttgatgaattctactgttataactacagcaaagca
gatgcacatatcctgacagagctgtcctatgagctcatgaagcactgtgaatcggagaga
gcttcctttaccccaactgttggagaaccatgttgtgctctcttcacaggagatgcccgc
tggtacagagccatggtattagaagtgtttggagagggtaaagctagagtttattttgtg
gactatgggaactcctgtgaggtggaggcagcacatctaaaggccatcatcccaagcctg
cttaaattgcctttccaagcaattcgctgttggcttgcaggagttgaaccagtggagggt
cagtggaataaggaggcagtgcataagtttcaggctctttgtgccggtcagccattgagt
ggtaaagtgctgtccatcactgagaagggttatggggtggagctggagagtgctggaaaa
agcattgctgctgtgctgatctcggagcacctggctaaaccttatggacaggtgaaaccg
cctccagtgcagccagctaaaccaaccaatcagattgaggatctgcctactcttaaaccc
attgatcagaatccacctgccgaagagcctttgaaagtgaacaagggagctgccaatgac
aaaaaagattcaacctcatcaagtggctcttttccattgaactggaagacattggagctg
tcttgcactgatactttccagccgagggtggcagcagtgatcagccctagtctcttctac
ataatgaatcctggacaagtgaatgtagaaggtctgaaggcagttatgactgatgttgca
aagtactgcagcaaacagccaatccccaatcagtgccaccccttaccaggagccgcctgt
tgtgcacagttctcaggtgacaaaaactggtaccgagctgttgtgttggaggtaacaacc
aagcatgcgcatgtcatttatgctgattatgggaacatggagacagtccctgtctctagt
atccttcccatcaccaaagaacttctccagcatccgttccagatcgtcagatgttcactg
gcaggtaaagagaacttccctacagtgtggcccactgaagttttagagctctttggaatt
cagttgagcgggggcgtcctggcatctttgcagggttttgatggcaccgccaacctgctg
acccttacccagcagtctggtcaagctgacagagacattaattccattatccttggagct
ctgcagaaaggaccgagcaggactaactcaaagcctcctgccattgttgttgaggaaaaa
aaggatgtagatcagaggaagacacaaaccgtcagctcaaccaaggccgcagatcaacct
cagtctgcagatgttaagaaacctgacttgaaagatcaagccctgcctctaagtcccagc
tacaggcttgaaaaaccagaaaacacgtccaagacggtgaacacagtggaatgcactgag
ccacgcacaattacgagcccaaaggacagcaatgctcctcaaacatgctgctgtcttgag
ttaaaacaaaagattgaccatattgagaaattgattctcctcctcgtgaaacaagttggt
ggaaccaaatag
DBGET
integrated database retrieval system
