Garra rufa (doctor fish): 141297495
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Entry
141297495 CDS
T11039
Symbol
cdh12b
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
141297495 (cdh12b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141297495 (cdh12b)
Cell adhesion molecules [BR:
grf04515
]
Cadherins
Major cadherins
141297495 (cdh12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
141297495
NCBI-ProteinID:
XP_073684022
LinkDB
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Position
22:complement(33579267..33779853)
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AA seq
817 aa
AA seq
DB search
MLRRNCLLLFLCFLFEQSSCAPFQSRPGQEWPHSQTAGPSSAAGRNGGSRGFQRVKRGWV
WNQFFVLEEYMGSDPQYVGKLHTDLDKGESAVKYTLSGEGAGTIFTIDQITGDIHALRSL
DREEKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTASVPEMSPVGT
YVMKVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIRTALPNMDREVKELYQVLI
QAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSAVGSAVGRIKAHDLD
IGKNAEVEYNIVPGDGGAMFDITTNEHNQEGIIMLKKPLDYETKKAYTFKVEASNAHLDP
RFHNFGPFKDTATVKINVLDVDEPPVFSKPSYAMDVYEDTPQGTIIGAVTAQDLDAGNSL
VRYSIDWKSDLDSFFDIDPVRGTISTNELLDRESIAQHNISVVATKVNNPVLTSRVAVTV
HVLDINEFPPELAMPYETFVCESAKVGQVIQVISAKDQDLPQAGQRFSFKSPQEGVKTKN
FTVRDFGSESDWFINDLPDTFDDMEFPDADAALENGLIMRFNGFSSVECATSGILVVTRH
RCQPGSQTAQKENTLSRWRLAIIGAPFVRLTHFPLHGCSHGRQMIVVLYVGVRRQKKKET
LMTSKEDIRDNVIHYDDEGGGEEDTHAFDMGTLRNPKVIKENLFRRDVKPELGLCPRRPV
ASQNSADMSNFISQRLQEHDGDTSAPPYDSLATYAYEGEGSVAESLSSIESVKGETEEDY
DYLNEWGPRFKTLAGIFGERSESQSDVTSSTTTENKH
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaggaactgcctgctgctgttcctgtgcttcctctttgagcagagctcctgc
gctcccttccaaagcaggccagggcaagagtggccccacagccagacggcggggccatcg
tcagcggcaggaaggaatggaggttccagaggattccagagggtcaagaggggctgggtg
tggaaccagttctttgtgcttgaggagtacatgggctcggacccacagtatgttggaaag
ttacacactgacttggataaaggggagagtgcagtgaaatacactctctcaggcgaaggc
gctggaaccatcttcaccatcgaccagatcaccggggacatacacgctttacgcagtctg
gatcgagaggagaagccttactacacgctacgagctcaagcggtggacatcgacaccaac
cgaccgctggaaccagagtcggagtttgtcatcaaggtgcaggacatcaacgacaatgag
ccaaagttcctggaagggccttacacggctagtgtacctgagatgtcacctgtgggtaca
tacgtgatgaaggtgacggcaacggatgcagacgaccctacatacggcaacagcgccaga
gtggtgtacagcatacttcacggccagccgtatttctctgtggatcccaaaacaggagtc
atcaggacagctctacccaacatggaccgggaggtgaaggagctttatcaggtcctcatc
caggccaaagacatggggggacagttagggggtctggcagggaccaccaccatcaacatc
accctgagtgacgtcaacgacaacccacccaggttctccaaaagcatcttccacctgcgt
gtaccggagtcatcagcagtcgggtcagcagttggccgaatcaaagctcacgatctggac
attggaaagaacgcagaggtggaatacaacatcgtccctggagatggaggagccatgttt
gatataaccaccaacgagcacaatcaggagggaatcattatgctcaaaaagccgttggac
tatgagaccaaaaaagcatacacgtttaaagtagaggcctctaatgcacacctggatcca
cggtttcacaatttcggcccgtttaaggacacagcgacagtgaagataaacgttctggat
gtggatgagcctcctgtcttcagcaaaccctcctatgcgatggatgtttatgaggacacg
ccacaaggcaccattataggagccgtgactgcacaggatctcgacgcaggaaacagtcta
gtcaggtactccatcgactggaagagtgacctggacagcttcttcgacatcgatcctgtc
agaggaaccatctccaccaacgagcttctggacagggagagtatagcccagcacaacatt
tcagtcgtggccactaaagttaataacccagtgctgaccagcagagtggctgtcacagtt
catgtgctggacattaatgagtttccacctgagctggccatgccttacgagacctttgtg
tgtgagagcgccaaagttgggcaggtgattcaagtcatcagcgcaaaagaccaggatctc
cctcaagccggacaaagattttctttcaaatcccctcaagagggagtgaagaccaaaaac
ttcaccgtcagagactttggaagtgagtctgactggtttattaatgatttacctgacaca
tttgatgacatggagttcccagatgcagatgcagccttggaaaacggtctaataatgcgt
ttcaatggattctcgtccgtcgaatgcgccacttccggtattttggtggttactcgacac
aggtgccagccgggatcacagacagcacagaaagagaacacattgtcgcgctggagatta
gccattatcggtgctccatttgtcagactgacccatttcccgctccatggatgcagtcat
ggcagacagatgatcgtggttctctacgttggagttcggcggcagaagaagaaagagact
ctcatgacgtccaaagaggacatccgtgacaatgtcatccattacgacgacgaaggaggg
ggcgaggaggacacgcacgccttcgacatgggcaccctccgcaaccccaaagtcatcaag
gaaaatctgtttcgccgagacgttaaaccagagttgggattgtgtccacggcggccagta
gcatcgcagaacagcgctgacatgagcaacttcatcagtcagcgactgcaagagcacgac
ggtgacacttccgccccgccgtacgactcgctggccacgtacgcctacgagggcgagggc
tcggttgcagagagcttaagctctatagagtctgtaaagggtgaaacggaggaggactac
gattacctcaacgagtgggggcctcgcttcaaaaccctcgcagggatattcggagaacga
tcagagagccaatcagacgtaacatccagcaccaccactgaaaacaaacactga
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