Garra rufa (doctor fish): 141297579
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Entry
141297579 CDS
T11039
Symbol
ebf3a
Name
(RefSeq) transcription factor COE3a isoform X1
KO
K09103
early B-cell factor
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141297579 (ebf3a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141297579 (ebf3a)
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
141297579
NCBI-ProteinID:
XP_073684093
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Position
22:35903093..36006471
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AA seq
588 aa
AA seq
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MFGIQENIPRGGTTMKEEPLGSGMNPVRSWMHTAGVVDANTAAQSGVGLARAHYEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVEKEKEPNSEKTNNGIHYKLQLLYSNGV
RTEQDLYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVVFGTMLVWSELITP
HAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYTALNEPTIDYGFQRLQKVIPRHP
GDPERLPKEVLLKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHNQIPSLANT
ASHGGMMGVNSFGGQLAVNVSETSQVGYSRNTSSVSPRGYVPSSTPQQSNYNTVSNSMNG
YGNTGMPNLGVPSSPGFLNGSSANSPYGSKYQVVPSSPTMAASSVSLSSNCSSTHGIFSF
SPANVISAVKQKSAFAPVVRPQASPPPSCTSANGNGLQAMSGLVVPPM
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggaaaatataccgagaggggggaccactatgaaagaggaaccgctg
ggcagtggcatgaatccggtccgatcgtggatgcacacggctggggtggtggatgcgaac
acggccgcccagagtggagttggtctggcacgggcgcactatgagaaacaaccgccatcc
aacctcagaaaatccaattttttccacttcgtcctggcgctttatgacagacagggacag
ccagtggagatcgaaaggacagcttttgtggactttgtggaaaaggagaaagaaccaaac
agtgaaaaaactaacaatgggatacattacaaactacaactattgtacagcaacggcgtc
agaacagaacaggatctttacgttcggttaatcgattccatgacaaaacaggctattatt
tatgaagggcaagacaaaaacccagaaatgtgccgagttctcctcacacacgaaattatg
tgcagtcggtgttgtgacaaaaaaagctgcggaaacaggaacgaaacgccctcggacccc
gtgatcatcgacagattctttttgaaattcttcctcaagtgtaatcagaactgcctgaag
aatgcaggaaacccacgggacatgcgcagattccaggtcgttgtatcgacaacggttaat
gtggacggtcacgtgttggccgtgtcggacaacatgtttgtccacaacaactcaaaacat
ggcagaagagcccgccgtcttgacccctcagaagcagctaccccgtgcataaaggccatt
agtcccagtgaaggctggaccactggaggagccacggtcatcatcattggcgataacttc
ttcgatggactgcaggtcgtgtttggcaccatgctcgtatggagtgagctcattacgcca
catgccatccgagtgcagacccctccaagacacatcccgggcgtcgtagaggtcaccttg
tcctacaagtccaagcagttctgcaaaggtgcaccggggcgatttgtgtatacagctttg
aacgaaccaaccattgactatggcttccagagactgcagaaggtcattcccagacatcca
ggtgatccggagaggttgcccaaggaggtgttgctaaagagagccgctgaccttgtggaa
gcgctgtacgggatgccacacaacaaccaggagatcatcttgaagagggccgcagatatc
gcagaggctctgtacagcgtcccacgtaaccacaaccagatcccgtctctcgcaaacacg
gcttctcatggtggaatgatgggagtcaactcttttggcggtcagcttgccgtcaacgtc
tcagagacctcacaagttggctacagtcgcaacacgagcagcgtctcgcctcgcggttac
gtgcccagcagcaccccgcagcagtccaactacaacaccgtcagcaacagcatgaacggc
tacggcaacacgggaatgcccaacctgggcgtgcccagttctccaggcttcttgaacggc
tcctctgcaaactctccctacggcagtaagtatcaagtagttccgtcgagccctaccatg
gcagcctcttcggtcagcctctcttcaaactgtagcagtacacacggcattttctcattc
tcacctgccaatgtcatctctgcagtgaaacaaaaaagcgcctttgctccagttgtcagg
ccccaagcatctccacctccttcttgcaccagtgcaaatggcaatggacttcaagctatg
tccggactggtggtcccacccatgtaa
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