Garra rufa (doctor fish): 141297581
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Entry
141297581 CDS
T11039
Symbol
mybpc2a
Name
(RefSeq) myosin binding protein Ca isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141297581 (mybpc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141297581 (mybpc2a)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141297581 (mybpc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_CYK3_C
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
141297581
NCBI-ProteinID:
XP_073684137
LinkDB
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Position
1:complement(41635108..41680787)
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AA seq
1142 aa
AA seq
DB search
MPEPKKKPGAKGEKVEAPPADKPAEDDEGRDDLLSDSEELPEDEHVPGEEPQMSEISGLF
VEKPQTVTAVKGKNVTFVAKVDSSQMLRKPTMKWLKGKWMDLGSKAGKHLQFKETYDRNT
KIYTYEMTIVKVVDGDAGGYRCEVTSKDKCDSCTFDISVEAAEETQQTNILEAFKRSGDA
GEDAGDLDFSGLLKKRERKQKEEPEIDVDVWEILKNAKPCDYEKIAFEYGITDLRGMLKR
LKKMKKVEPKKSDAFLRKLDPAYSVEKGKKIQLSVELADPNAQVKWLKNGQEIKPSAKYI
FESVGGIRKLTINKCTLADDAAYECVVGEEKSFTEVFVQEPPVTITKMLDDVHVVVGEKV
EFEVEVSDEGANVKWMKDGVELSRDGKYRFKKDGTKHWLIINEATTEDIGTYYVYTSGGE
SKGELEVEEKELEVLQSIADLTVKSAEQAVFKCEVSDEKVTGKWFKDGVEVIPSDRIKMT
HIGRTHKLVIDDVKPEDAGDYTFVPDGYALSLSAKLNFLEIKIDYVPRQEPPKIHLDTTG
NYVNKNTIIVVAGNKLRFDVDITGEPPPTVCWRKGDTEISEAEGRVRVEARKNLSCFVIE
GAERSDEGLYHITVINPAGEDKADVMVKIVDVPDPPENVKCTGVGEDNAAIQWDPPKFDG
GVPVKGYLMERKKKGSSRWTKLNFDIYESTTYEAKKMIEGVLYEMRVFAVNGIGISQPSA
NSKPFMPIAPTSEPTRLMVEDITDGTCALKWLPPERIGAGGIDGYFIEYCVEGATEWVQA
NETPVEKNSYRVRGLPVGEKMLFRVTAVNIAGRSPPAELAQAVTIREIVERPKIRLPRQL
RTKYIKRVGEKVNLVIPFQGKPRPVVTWLKDGAPLDTGMVNIRTSEVDTILFIRQTARDH
SGLYTLSVQIENMEDKVNLEIQIVDKPGPPIAVTVTDVWGFNAALEWKPPKDNGNCEITG
YTIQKADLKTKEWFTVLEHNRRPSCTVSDLVMGNEYTFRVFSENICGMSDDAGLSKNTAV
IAKTGLKQKVQPYKEKDMCSSPKFITPLVDRSVIAGYRAAISCAVRGHPKPKIIWMKNKM
IIGEDPKYLMQNNQGVLTLNIRKPSLFDGGKYTCKAINDLGEDEVECKLEVRVITEKEAE
KK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccgaagaagaagccaggtgccaagggagagaaggtggaagctccacctgct
gataagcctgccgaagatgatgagggccgcgacgatttgttatctgattctgaagaattg
cctgaggatgaacatgtcccaggagaagagcctcagatgtctgaaataagtggcctgttt
gtggaaaagcctcagactgtcactgccgttaaagggaaaaatgtcacatttgtggctaag
gtggactcctctcaaatgctaaggaagccaactatgaagtggctgaaggggaaatggatg
gatctgggcagcaaggctggaaaacacctgcagttcaaagaaacctatgatagaaacacc
aagatctacacctatgagatgaccattgtgaaggttgtggatggagatgcaggaggttat
cgttgtgaggtcacttccaaagacaagtgtgacagctgcacatttgacatctctgtcgaa
gctgctgaagagacacagcaaacaaacattttggaggcgttcaaacgatcgggagatgca
ggagaggatgcaggtgatctggacttcagtggtttactcaaaaaaagagagaggaagcag
aaggaggagcctgagatagacgtggatgtgtgggagatcctgaaaaatgccaagccgtgt
gattacgagaagattgcctttgaatacggcatcactgatctcaggggcatgctcaaaaga
cttaagaagatgaagaaggtggagcctaaaaagagcgatgcttttctaaggaagctggat
cctgcttactctgtggagaaaggaaagaaaatacagcttagtgtggagctggctgacccc
aacgctcaagtcaaatggctgaaaaatggacaggagatcaaaccttcagccaaatatatc
tttgagagtgtgggtggtatccgtaagctcactattaacaagtgcacccttgctgatgat
gccgcgtatgaatgtgtggttggagaggagaagagtttcactgaggtctttgtccaagaa
ccacctgtcaccatcactaagatgttggatgatgtccatgtggtggtcggggagaaggtg
gagtttgaggttgaagtgtctgatgagggagccaatgtgaaatggatgaaggatggcgtg
gaactgagccgagatggaaagtatcgctttaagaaagatgggacaaagcactggctcatc
atcaatgaggcaaccacagaggacattggaacatactatgtgtacactagcgggggggag
tccaagggagagctggaagtggaagagaaggaactggaggttttgcagagtatagctgat
ctgacagtgaagtcagcagaacaggctgtcttcaagtgtgaagtgtcagatgagaaagtg
actggcaagtggtttaaggatggggtggaggtcattcccagcgaccgcatcaaaatgaca
cacatcggcaggacccacaagctggtgatagatgatgtgaagcctgaagatgcgggagat
tacacctttgtaccagacggttatgctctttctctttctgccaaactcaacttcttggag
atcaagatcgattacgttcctcgtcaagaaccacccaaaatccacctggacaccactggc
aactatgtcaacaaaaacaccattatcgttgttgcaggaaacaagctccggtttgatgtt
gacattacaggagagccccctcccactgtgtgctggagaaaaggagatacggagatctct
gaagctgaagggcgtgtaagagtggaggccaggaagaacctgagctgctttgttattgaa
ggggcagagagatccgacgagggcctctatcatatcactgtaatcaacccagcaggagag
gacaaggctgatgtcatggttaagattgttgatgtgcctgacccacctgagaatgtgaaa
tgcactggagtgggtgaggacaatgctgctatccagtgggatccacctaaatttgatggt
ggagttccagtgaaaggttacctaatggagagaaagaagaagggctcttccagatggaca
aagctaaactttgacatttatgagtccacaacatacgaggctaagaagatgattgagggt
gtgttatatgagatgagggtgtttgctgttaacggtattggcatctcccagcccagcgcc
aactccaaacccttcatgcccattgcaccaactagtgaaccaacacgcctaatggtggaa
gacattacagatggtacctgcgctctgaaatggcttcccccagagagaattggagctggt
ggcattgatggatacttcattgaatattgcgttgagggagccactgagtgggtgcaggcc
aacgagacccctgttgagaagaatagttacagggtcagagggctgcccgttggagagaag
atgctgttcagggtgacagctgtgaacatcgctggtcgtagccctccggctgagttggcg
caagctgtcaccattcgggagattgtcgagcgtcctaaaatccgcctcccgcggcagctt
cggactaagtacatcaaaagagtgggtgagaaggtcaaccttgtcattcccttccagggc
aaaccgcgcccggtggtgacctggctcaaggatggcgcacctctagacaccgggatggtg
aatatccgcaccagtgaagtggacactatcctgttcatcaggcagacggccagagatcac
tctggactgtacaccctttccgtgcagattgaaaacatggaggacaaagtcaatcttgag
atccaaattgtagacaagcctgggccaccaattgccgtcactgtgactgatgtttggggc
ttcaatgctgctttggagtggaagcctccaaaagataatggcaactgtgagatcactggc
tacaccatccaaaaggccgacttgaaaaccaaggagtggttcacggttcttgaacacaat
cgcagacctagttgtaccgtgtctgatctggtgatggggaacgagtacaccttccgcgtg
ttcagcgagaacatctgtggcatgagtgatgatgctggcctcagcaaaaacacagctgtc
attgccaaaacaggtcttaaacaaaaagtgcaaccctacaaggaaaaggatatgtgcagc
tctcctaagttcatcacacctctcgtggacagatccgttatcgcaggatacagagctgcc
atcagctgtgctgtccgtgggcacccgaaaccaaagattatatggatgaagaataagatg
attattggagaggatccaaaatatctcatgcagaataaccagggtgtgctgactttaaac
atccgcaagcccagcttgtttgatggagggaagtacacatgcaaagccatcaatgacctg
ggagaggatgaagtggagtgcaagctggaggttcgagtcataacagaaaaggaggcagag
aagaagtga
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