Garra rufa (doctor fish): 141297666
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Entry
141297666 CDS
T11039
Name
(RefSeq) serine/arginine-rich splicing factor 2-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141297666
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141297666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141297666
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141297666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
RRM_8
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
141297666
NCBI-ProteinID:
XP_073684202
LinkDB
All DBs
Position
22:28786609..28790456
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AA seq
224 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGAPPRRYGGHGRRSRSR
SPRRRRHSRSRSRSRSRSRSRSRSRYTRSRSRSYSRSRSRSRSRSKTRTPRRSKSKSASR
SRSRSKSKSRSRSRTPRSNKGSKSRSRSRSRPKSPEDAGATAES
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcagacctccgcccgacgtcgagggcatgacatctttaaaagtcgacaat
ctgacgtaccgcacgtctcccgaaacgctgcggcgggttttcgaaaagtacggccgggtc
ggggacgtctacatcccgagagaccggtacacaaaagagagccgcgggtttgcattcgtc
cgttttcatgataagcgggacgcggaggatgcaatggacgccatggacggcgcgctgctg
gacgggcgcgaactgcgtgtgcaaatggcgcgatacgggcgccctccagattcgcattac
ggccgtcgcggagccccgccaaggaggtacggaggacatggacggagaagccgaagccgt
agtcctcggcgcaggaggcacagcaggtctaggtccaggagcaggagcaggtcccgttcc
cgtagcagatcccgctacacccgctcaagatccaggtcctactcccgttcccggtctagg
tcccgttcccgctccaaaactcgcacacctcgcagaagcaagtccaagtcggcttccagg
tcccggtcaaggtctaagtccaagtctcgctccaggagccgcactccgagatcaaacaaa
ggatccaaatcacgatccagatcgagaagcagacccaaatctccagaggatgccggagcc
accgctgaatcgtga
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