Garra rufa (doctor fish): 141297778
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Entry
141297778 CDS
T11039
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
KO
K12188
ESCRT-II complex subunit VPS22
Organism
grf Garra rufa (doctor fish)
Pathway
grf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141297778 (snf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141297778 (snf8)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141297778 (snf8)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
141297778 (snf8)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141297778 (snf8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
CDK5RAP3
Sigma70_r1_1
AbiEi_4
Activator-TraM
DUF4896
Motif
Other DBs
NCBI-GeneID:
141297778
NCBI-ProteinID:
XP_073684332
LinkDB
All DBs
Position
22:complement(19974002..19977072)
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AA seq
258 aa
AA seq
DB search
MHRRGVGAGAIAKKKLAEAKYKERGNVLAEDQIAQMSKQLETFKTHLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKAMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVTVSEIRDSLKWEKERACHVLDHLLKEGLAWLDSQAAGEPQYWLPALF
SELLSRDVTPEEANQMTP
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaagaggagtcggagcgggagcgatcgccaaaaagaaacttgcagaggcaaag
tataaagagagaggcaatgtccttgctgaggatcagatcgcacagatgtcaaaacaactg
gaaacttttaagacccatttggaagagtttgccagcaaacacaaacaagaaatccgtaag
agctctcagttcagggtgcagttccaagagatgtgtgccaccataggggttgatccactg
gcatctggaaaaggattttggtctgagatgcttggagttggggatttttactatgagctt
ggtgtacagatcattgaagtctgtttagctctaaaacacagaaatggtggactcatcaca
ctggatgaacttcaccaccgtgtcttgaaaggaagaggaaagtttgcacaagatgtgagc
caggatgacttggtgcgggccatcaagaagctcaaggctatgggaaacggctttgggatg
attcccgttggaggctcttatctagtccagtcagtcccagcagagctcaacatggatcac
actgtcgtccttcagctagcagagaaaaagggctacgtgacagtgagcgaaatcagagac
agcctcaagtgggaaaaagagcgggcctgtcacgttcttgatcacctgctgaaagaaggc
ttagcatggctggactcccaagctgcgggggagccacagtattggctgcctgcactgttc
tctgagctgttatctcgagacgtcacgcctgaggaggccaaccaaatgacaccttga
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