Garra rufa (doctor fish): 141297870
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Entry
141297870 CDS
T11039
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141297870 (zeb1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
141297870 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
DUF6801
zf-C2H2_15
zf-met
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
141297870
NCBI-ProteinID:
XP_073684434
LinkDB
All DBs
Position
22:complement(24618312..24705450)
Genome browser
AA seq
1072 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGTADPDGRWDDVKEECVSDEDERSRDALVEEMLQQGDTAVIFPEAPEDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRTSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGIFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNVLKVAVDGNVIRQVLEKGQQAGTGIVGAGGVGIAQAPQQV
IQAISLPILDQDGNAKIFINYSLDPSQAQAVLQSPKKEQLNTEACKAQKLPEDLTVKTIR
DKTTNTVDEKSILHNDTTLKHCGKDGHRVNGKNLEGKIDLEEGLCPGQPPLKNLLSLLKA
YFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISVDPSSPLAEDEQTTPGDSDG
TTEVSESDKQMNSEVQGERECCSPAEGIAAGENGIESVPTSPSPLNLSADGPVPARTLEE
GEGPLDLSLPKSAATAATASGHVNTVYSAQEEPLNLTCTKKELLSNASTNAAIFASQPSA
NPINIVTTQLPTLVAITDQGQAQCLRALTTTKQTILIPQLTYSYTTTSSSPAGNDTPQKN
IIHVNGIKEEKQEMGSEVTSALEEQTDSDSGPTRKKMKRTESGLYACDLCDKIFQKSSSL
LRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHSGSYSQHM
NHRYSYCKKEAQGQGLGQGVEEEDNPGEEQPRTGSTATSPPSHLDSDERGSSTREDESEE
DEEMGSGSLVDEDEIQVVKIGEEGDGDEDEGERMAEDGDEEGESEENEGQTLKVVVMQDE
CEDDNGEDERTAEEAMDTETLEHMKDTTERENPADDTIENEENTADMNGDVK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactacagtcatgtgctggagggccagtcagactcagatgatgaagataagcttcac
atcgtggaggaggaagggagtctcctggacggggctgactgtgacagtgtggcccctgac
gatgaccctaacgggaccgctgaccccgacggcagatgggacgatgtgaaagaggagtgc
gtgtcagacgaggatgagaggagcagagatgctttggttgaggagatgctccagcaagga
gacacggccgtcatcttcccagaggctccggaagacgaaccacgacagggcacaccagaa
accagcggacatgatgaaaatggcacgccagactcattttctcagctcctcacctgtccc
tattgctctcgtggctacaagcgttacacctcactgaaggaacacattaaatacagacac
gagaagagcgaggacaacttcagctgctctctctgcagctacacctttgcctaccgaaca
cagctagacagacacatgactgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttacgagtgctcc
aactgcaagaagcgtttttctcattccggctcatacagttcccacatcagcagtaagaag
tgcatcggcctcatctcggtaaatgggcggccgcgaacttctcccgccaccggagctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccccacggcacgtgtccaa
gtccgagacaaactggacaatagcaaaccccttcaggaacagcttcccttgacacagatc
aagtccgagccactggactacgagtacaagcctgtggtggtggccccttctgctagaggt
gtaaatggcatattccagggtggggcagcagcccctcttcagggtgctgtacaggctgtt
gtgctcccaacagtgggtctggtatcgccaatcagcatcaacctgggggacttacagaac
gtgctaaaggtggcagtggatgggaacgtcatcaggcaagtgctggaaaagggccagcaa
gcagggacaggaattgttggagcaggaggggtgggaattgcccaagcaccccagcaagtc
atacaggccattagtcttcccatcttggatcaggatggtaatgctaagatcttcatcaat
tacagtctagacccttcacaggcccaagcagtccttcaaagtccgaagaaggaacagttg
aacacagaagcctgcaaggctcagaagctgcccgaggacttgactgtcaagacgattagg
gacaaaaccaccaacactgtggatgagaagagtattttacacaatgacacaacacttaag
cactgtggtaaagatggacatagggtaaacgggaaaaaccttgaggggaagatcgacttg
gaggaaggactgtgtcctggccagcctccgctgaagaaccttctctccttgctcaaggct
tactttgccttaaacaacgagcccactaaggaggagttggcaaagatatccgaatccgtc
agtcttccggcggaggtggtgaagaagtggtttgagaagatgcagttgggacagatctct
gtagatccctcctcacccctggcagaggatgagcagaccactcctggggattcggatggg
actacagaggtatcagagtcggataagcaaatgaactcagaggtgcaaggagagagggaa
tgctgtagcccagccgagggcatagcagctggggagaacgggatcgagagtgttcctaca
tccccttcaccactaaacctatcggctgacggtcctgtcccagccaggactctcgaggaa
ggcgagggacctctcgatctgtcgctaccaaaatctgctgctacagctgctacggctagc
ggtcacgtaaacactgtttactcggctcaagaggagccgctgaatttgacttgcacaaag
aaggaactgctcagcaatgcaagcaccaatgctgccatatttgccagccaaccaagtgcc
aatcccataaacatcgtgaccactcaactgcccaccctagtggctatcactgaccaggga
caagcgcaatgtcttcgtgcacttaccaccaccaaacagaccatcctgatcccgcagctg
acttacagttacaccactacgtcctccagcccagcagggaacgacacaccgcagaagaac
attatacacgtcaatggcatcaaggaggagaaacaggagatgggatcagaggtcacctca
gcattggaagaacagacagactcagactcagggccgacgagaaaaaagatgaaaaggacg
gagagtgggttgtacgcctgtgacctgtgtgacaaaatcttccagaagagcagttcgctg
ctccgccataaatacgaacacacaggaaagaggcctcatgaatgtgggatctgcagcaag
gccttcaaacacaagcaccacctaatagagcacctgcgcctgcactccggagaaaagccg
taccagtgcgacaagtgcggcaagcgcttctcccactctggctcctactcgcaacacatg
aaccaccgatactcctactgtaagaaagaggctcaaggccaagggctaggccagggagtc
gaggaagaggacaatcctggcgaggagcagcctcgaacaggcagcacagcgacctcgccc
ccttcccacttggactcggacgagcgagggagtagtaccagagaagacgagagcgaggag
gacgaggagatgggctcagggagcttagtagacgaggatgagattcaggtggtcaagatt
ggagaggagggagatggcgatgaagacgaaggagagcggatggcggaagacggtgacgag
gaaggcgaaagtgaggaaaatgaaggacagacgctgaaagtcgtagtgatgcaggatgaa
tgtgaagacgataacggagaggacgagcgaacggcggaggaggccatggacacggaaact
cttgaacacatgaaggacacgacagaaagagaaaacccggcggacgatacgattgaaaat
gaagaaaacacagccgatatgaatggagacgtcaagtga
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integrated database retrieval system
