Garra rufa (doctor fish): 141297934
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Entry
141297934 CDS
T11039
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
grf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141297934 (chad)
04518 Integrin signaling
141297934 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141297934 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
grf00535
]
141297934 (chad)
Proteoglycans [BR:
grf00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
141297934 (chad)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRRNT
LRR_9
LRR_14
A-2_8-polyST
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
141297934
NCBI-ProteinID:
XP_073684505
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Position
22:24438480..24448991
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AA seq
363 aa
AA seq
DB search
MYSFNFLLVLLCLQVCVPFVFGAPTQCPSQCHCHGDLQHVICDSVGLKKIPRISEATRLL
NMQRNNLGNLPTGGFSEMKGLISLHLQHCQIREVASQAFKGLKKLIYLYLSNNEISTIKP
GAFDDLTELTYLYLDGNQITSLSKGMLSPMINLFILQLDNNKLRELQPGTFTGASDLRWL
YLSGNELSSIQPGSLDEVENLAILTLDRNKLSTYPLLAMSKLRVVEELNLSKNPLTLIPD
HAFRSFGRYMEKLHLNNMSLEKFSSAAFEGVTALKSLHLENNKLKSLPSSLEFGTLQNIT
LFNNPWTCNCQLANLRKWMDTSRHRPDAVCASPGSQKGKQIRDSTAFSRCKAKIKRARKG
ARL
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtacagtttcaacttcctactggtgctactgtgtctgcaggtctgcgtcccctttgtg
tttggtgcaccaactcagtgcccaagccagtgccactgtcatggggacctgcaacatgtt
atctgcgatagcgtcgggctgaagaagatcccccgcatatccgaggccactcgtctcctg
aacatgcaacgcaacaacctgggaaatctcccaaccggaggcttcagcgaaatgaagggg
ctcatttctctgcacctacagcactgtcaaatccgagaggtcgctagtcaggctttcaaa
gggctaaagaagctcatctacctctacttgtctaacaatgagatcagcaccatcaaacca
ggcgcttttgatgacctgaccgaactgacttatctctacttggacgggaaccaaattaca
agtctttcgaagggcatgctttctccaatgatcaacctgtttatcctgcagcttgataac
aacaagcttcgagagctgcagcctggtactttcaccggtgctagtgatctccgatggctt
tatctgagtggcaatgagttgagctccatacagccaggttccttggatgaagtggagaac
ctggctattctaactctggaccgtaacaagctgtccacctaccctctcctggctatgagc
aagctgcgagtcgtggaggaactcaacctgtccaaaaaccctctcaccctcatccctgac
catgctttccggagctttgggcgctacatggagaagctgcatctaaataacatgagcctg
gagaagttctccagtgctgcctttgagggagtgacggctcttaaatctctgcacctcgag
aacaacaagctaaaatcactgccgagcagccttgagttcgggaccctccagaacatcact
ctttttaacaacccctggacctgcaactgccagttagcaaacctcagaaaatggatggac
actagccgccatcgccctgatgcagtttgtgcttctcctggaagccagaaaggaaagcaa
ataagagacagcactgctttcagccgctgcaaggcaaagataaagagggccaggaaggga
gcacggctttga
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integrated database retrieval system