Garra rufa (doctor fish): 141298000
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Entry
141298000 CDS
T11039
Symbol
tut1
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141298000 (tut1)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
141298000 (tut1)
2.7.7.52 RNA uridylyltransferase
141298000 (tut1)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
141298000 (tut1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
RRM_1
RRM_PARP14_3
TUTase
RL
zf-met
RRM_3
Nup35_RRM_2
RRM_5
RRM_PARP14_1
DUF7066
Cu_amine_oxid
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
141298000
NCBI-ProteinID:
XP_073684592
LinkDB
All DBs
Position
22:10562603..10574778
Genome browser
AA seq
799 aa
AA seq
DB search
MEHDKDIQTTQRGFHCSLCIVNIPNKPSLEDHVKGKKHQHLVRLRAQRKAQEQNSVFVSG
FKPDTSQTDLKEYFAQFGPVSDVIMDKQKGVYAIVEFSEPQIAQEVLAQLEHQLDGLKLR
VKSRERKEFKLASRGKQDSKNTQINLDKLNNELCKATSVNEQMQKVVESFELKENEKKMR
DLLVQLLQEVFTEFFPDCQIVPFGSSVNTFGIHSCDLDLFLDLENTKVFQARAKTSEASG
ENQSEDCHSEDSILSDIDLSTATPAEVLELVAVILRKCVPGVHKVQSLSTARLPVVKFSH
KELNLHGDITINNRLAVRNTRFLQLCSGVDSRLRPLVYTIRLWAKQKQLAGNLSGPGPLL
NNYALTLMVIFYLQNRDPPVLPSVNQLKNMACEEEECVIEEWDCTFPSQPFIVPSSKNTE
DLSTLLFGFFTFYSKFDFPASVVSLRDGHVLPITDFLRNDEEVIDTAEASAPKPKRSSAP
KLGPMNVLDPFEQNHNVAGNLNERTQKNFKRECSEAEKYCRSLQYQRKSTKGKSWGLVRL
FAPPSEAGPRSQVETEKIMEVSIPFKAAVLPEPLRAQLALAGKRFRRLWFAKICSAVHTV
FHEILKCSRVEETQTKAATTSHKADTEGNEMEVNNNRSVEDSGSQAKGEAGKKRPLTVEE
DEGPSTSTVIEAKRHRLDADLEHPEPVHWIWTQRNRVWAGRRKVRRDLLKTSDETSKPEG
GCVDIESRVTQSIVEKEEKMQDLLEFKVDAEVVGGNESTMVVLRFHPSHDTTGVFQDFFH
FLESFLPKMAETILGRTGS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgataaagacatccagacaacgcaaagaggatttcactgcagcctctgcatc
gttaatatacctaacaagccaagcctggaagaccatgtcaaaggaaagaaacaccaacat
cttgtgcgtctcagagctcagcgtaaagctcaggagcagaacagcgtgtttgtgagcggc
tttaaaccagacacctctcagaccgatctgaaggagtatttcgcacagtttggaccggtg
tcagatgtgatcatggacaagcagaagggtgtctatgctatagttgagttctctgagcca
cagattgcacaagaggttttggcacaactagagcatcagcttgatggtctcaagctccgt
gtcaaatccagagaaaggaaagagttcaaactggccagcagggggaaacaagactccaaa
aacacccagatcaacctggacaaactcaacaatgagctctgcaaggctacatctgtcaat
gagcagatgcagaaggtggtggagagtttcgagttgaaagagaatgagaagaaaatgaga
gatcttctagttcagctgctacaggaggtcttcacagagttctttccagattgccagatt
gtgccttttggctcctctgtgaacacatttgggattcactcctgtgaccttgatctgttc
ctcgaccttgagaacaccaaagtatttcaagctcgtgccaagacttctgaagcgtcagga
gaaaatcagtctgaggattgccattctgaagactccattttgtccgacattgacctgtcc
actgccactcctgctgaagttttggagctggttgctgtcattttaaggaagtgtgttcca
ggcgtccacaaagtccagtcgctcagcactgcgcggcttcctgtggtcaagttcagtcac
aaagagctcaacctccatggagacatcaccatcaacaacagattggctgtaagaaacact
cggtttttgcagttgtgttcgggtgttgactccagactgcgacccttggtctacactatc
cgattatgggccaagcaaaaacagttagcaggcaacctctctggtcctggaccgttgttg
aacaactacgctcttacgctgatggtgatcttctaccttcaaaatagagaccctcctgtg
cttccttctgtgaaccagctcaaaaacatggcctgtgaggaagaagagtgtgttattgaa
gaatgggattgtacatttcctagtcaaccatttattgtaccatctagcaaaaacactgaa
gatctctccactttgctttttggattcttcaccttctactcaaagttcgatttccctgca
tcagtggtgtctctacgagatggccatgtattgcctatcacagacttcctccgaaatgac
gaggaagtgatagacaccgcagaggcctctgctcccaaacccaagcgctcctctgcccct
aaacttgggcctatgaatgtcctggatccatttgaacaaaaccacaacgtggccgggaac
cttaatgaacgaacgcaaaagaacttcaagcgagaatgctctgaggctgagaagtactgc
cgcagtttgcagtatcagcgcaaatcaaccaagggcaaatcctggggcctcgtgcggctc
tttgcaccaccgagtgaagccggaccacgttcacaggtcgagactgagaagattatggag
gtcagcattcctttcaaagcagccgttcttccagaacccttgcgtgcccaactggcattg
gctgggaagagatttagacgtctttggtttgcaaaaatctgctctgctgtacacacagtg
tttcatgaaattttaaaatgctcacgtgtagaggaaactcaaactaaagctgcaacaact
tcgcacaaagcagacacagaaggaaatgaaatggaggtgaataataaccggagtgtagaa
gattctggttctcaagccaaaggtgaagctggtaagaagaggcctcttacagtggaggag
gatgagggtccgtcaacttccaccgttatagaagctaaaagacacagactcgatgctgat
ctggagcacccagagccggtccactggatttggactcaaaggaaccgtgtttgggccggc
cgacggaaagtgcggagagatctcttgaagactagcgatgagacttccaaacctgaagga
ggatgcgttgacattgagagcagggtgacgcagagcatcgtggaaaaagaggagaaaatg
caagatttgctggaattcaaagtggatgctgaggttgtcggaggaaatgaaagcactatg
gttgtcctccggtttcatcccagccatgataccacaggtgtctttcaagacttctttcat
tttctggagtccttcctgcctaagatggcagaaacaattctagggaggacagggtcataa
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