Garra rufa (doctor fish): 141298007
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Entry
141298007 CDS
T11039
Symbol
lrit1b
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1b
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141298007 (lrit1b)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
141298007 (lrit1b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
fn3
Ig_2
LRR_14
LRRNT
Motif
Other DBs
NCBI-GeneID:
141298007
NCBI-ProteinID:
XP_073684609
LinkDB
All DBs
Position
22:complement(38797366..38800844)
Genome browser
AA seq
663 aa
AA seq
DB search
MCVLGFWAFACGRVFWAFGLVLCCLPLLCGTCPAQCNCFYHKLSDGSKSRSVLCNDPDLT
IIPNNFPSDTSKLRIEKTAISRVASESFHYLSSLEYLWISFNSLSSLSVDGFRGLYALDE
LRIDGNVLTSFPWECLMDMPNLRLLDLHNNKISSIPAEATIYIKNLTYLDLSSNSLATVP
AEVLTSWFSPKPPQDIENSKMILGLHDNPWQCDCRLFDLVQFQKYPSSSVAFIDTGLRCA
EPESLSGVLFSDTELRKCQVPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSWYRADGK
PMNGTVQQEVSKEGIIWSILSVPAVSYRDSGKYVCRATNFVGSADAIISLVISDTWQIDE
AVAKRSHGKKNGGFGRAAYQEKLIARYVPPATSAAVPIIEPLNRPKVTSSIQIESYSISD
NVSKAKTTAPPPAATETDSGIGELQKDVLSNLEANASSLQQGPERRVVRSVKVIGDTDHT
VSLNWRAPTATNTTSFSVLYAVFGERDMRRINVGPGQNRVTIEGLVPKTKYIACVCVKGL
IPKKEQCVIFSTDEAASASGTQKLINVVVITVACVIAVPLTLIVCCGALKRRLQKLMGRK
SKDMQDSYVTFETLSPGTKAKGLEGEYLTRLNPDESNRLLSARSSVDSEATARTEGQPNE
YFC
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttttgggcttttgggcttttgcgtgtggccgtgtgttttgggcttttgggctg
gtgctgtgctgccttccgttgctttgcggcacctgtcctgctcaatgcaactgcttctac
cacaaactgagcgacggctccaagtcgaggagcgtcctgtgtaacgacccagacctcacc
atcatcccaaacaactttccgtctgacacttccaaactccgcatcgagaaaaccgccatc
agccgcgtcgccagcgaatcctttcattacctcagtagcctggagtacctctggatatcc
ttcaactcgctttcctccctcagcgtggacggtttccgtggactttacgccttggatgaa
ttacggatagatgggaacgttctcacttcctttccgtgggaatgtttgatggacatgcct
aaccttcggcttctggatttgcacaacaataaaatcagcagcatcccagctgaagcaacc
atttacatcaaaaacctcacctatctggatctgtccagcaacagtctggccaccgttcca
gcggaggttcttacttcatggttctctccgaaacctcctcaggatatagagaattccaaa
atgatattgggtctccatgacaatccctggcagtgtgactgtcgcctctttgatttggtg
cagttccagaaatacccttcttcctctgtggcgttcatcgatacgggtctgcgctgtgcc
gaaccggagagtctgtcgggagtcctcttctctgatacggaactccgcaagtgtcaggtt
ccccgggttcacacggccgtcgcgagggtccgcagctccatcggcaacaacgtccttctg
cgctgcgggaccatcggagtgcccatcccggagctgtcctggtaccgagccgacggcaag
cccatgaacggcacagttcaacaggaagtctctaaagagggcatcatctggtccattctc
agtgttcctgctgtttcgtacagagattctggaaaatacgtttgcagagccacgaacttc
gtcgggagtgccgatgccattatttcacttgtcatttctgatacgtggcaaatcgacgaa
gcggtcgccaagagaagtcacggaaagaagaacggtggattcggtcgagcggcgtatcaa
gagaaactcatcgccagatacgtgccgcccgccacgtcagccgccgtgcccattatcgag
cccctaaaccgacccaaagtcacgtcgtccatccagatcgaaagctacagcatttctgat
aatgtttcaaaagcaaaaaccacagcgccacctccagccgccacagaaacggacagcggc
atcggggagcttcagaaagacgtcttgagtaacctcgaggctaacgcgtcgtctctacag
cagggcccagagcgcagagtggttcggtcggtcaaagtgatcggtgacacggaccacacg
gtatcgctgaactggcgcgcgcccaccgccaccaacaccacgtccttcagcgttctgtac
gccgtcttcggggagcgggacatgcgtcgcattaacgtaggcccgggccagaaccgcgtc
acgatcgagggcctcgtgcccaaaaccaagtacatagcgtgtgtctgtgtgaaaggactc
atccccaagaaagagcagtgtgtgattttctccacggatgaggcggccagcgccagcggc
acacagaagctcatcaacgtggtggtgatcacggtcgcctgcgtcattgcggttcctctg
actctcatcgtctgctgcggggcgctaaagaggaggctgcagaaactgatgggcaggaag
tccaaagacatgcaagattcgtacgtgacgtttgaaactctgtccccaggcaccaaagcc
aaagggttggagggggaatatctcaccagactcaacccggatgagtccaaccgcctgctg
tcggcccgctctagcgtggactcagaggccacggccagaaccgagggccaacccaacgag
tacttctgctga
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