Garra rufa (doctor fish): 141298136
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Entry
141298136 CDS
T11039
Symbol
rhobtb1
Name
(RefSeq) rho-related BTB domain-containing protein 1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141298136 (rhobtb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141298136 (rhobtb1)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
grf04031
]
141298136 (rhobtb1)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
141298136 (rhobtb1)
GTP-binding proteins [BR:
grf04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
141298136 (rhobtb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
TAF1C_beta-prop
Motif
Other DBs
NCBI-GeneID:
141298136
NCBI-ProteinID:
XP_073684747
LinkDB
All DBs
Position
22:9524080..9548185
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AA seq
687 aa
AA seq
DB search
MDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQE
VLERSRDVVDDVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYL
EIKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLSRPIKPGDILPPESGREVAKELGIP
YYETSVFDQFGIKDIFDNAIRAALISRRHLQFWKSHLRKVQKPLLQAPFLPPKAPPPLIK
IPECPAKNRDGPRQLLESPLCADVMFVIQEHIHLFAHRIYLSTSSSKFFDLFHMDFSDES
QCLVVTERHGRDQLMRTLSLDTEEDVTVLPNLSPCSLRASKSDGTLKMMSFSGMHRRTKL
SLASWSKAFHSIHKENVINPVTGSPALMTVVKMDHSIHHGPFSAVLRFLYTGELDEKEKD
LMKIAQIAEILEVFDLRMMVENIMNNEGFMNQEITKAFHVRKANRIKECLAKNNFTDVVF
RLDDGTINAHKPLLISSCDWMAALFGGSFMESANDDVSFPNTSRVCMQAVLEYLYTNQLS
PMADLDPMELIALANRLCLPRLIALTEQYAVSELVKASKDGQDIDGEVLTYLELAQFHNA
NQLAAWCLHHICTHYNRICANYRKEIKSKSTENQEYFEKHRWPPVWYLKEEDHYQRVKKE
REKEDVVLNKHHSRWRWCFWSTSPAVA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggactacgaaagacccaacgtagagaccatcaagtgtgttgttgttggagacaatgct
gtggggaagactcgccttatttgtgcccgggcctgcaacactaccctaacccagtaccaa
ctgttggccacccatgtacccaccgtctgggccattgaccagtacagagtctgtcaagag
gtcttagaacgttccagagacgttgtggatgacgtaagcgtgtccctccggctatgggac
acctttggagaccatcacaaagacagacgcttcgcctatgggaggtctgacgtcgtggtt
ctctgcttttccatcgccaatcccaactccctacaccatgttaaaacaatgtggtacctc
gagatcaagcacttctgtccacgcacacctgtcatcctggtcggctgccagctggacttg
cgctacgctgacctggaggcagtcaatcgagctaggcgaccattatcaaggcccattaaa
cctggagatattttgcctccagagagtggaagagaggtcgccaaagagctcggcatccca
tactacgagacaagcgttttcgatcagtttggcatcaaggatatatttgataatgccatc
cgagctgccctcatctctaggcgccacctacaattctggaagtcccacctgaggaaggtc
caaaagccactgttgcaggcaccatttttgccacccaaagctcctccgccacttattaag
atcccagagtgccctgccaaaaaccgtgatggcccgaggcagcttcttgagagccccttg
tgcgctgatgttatgttcgtcattcaggaacacatccacttgtttgcccacaggatctac
ctgtctacctcatcctccaaattctttgacctctttcatatggacttctcagacgagtcc
cagtgcttggtggtaactgagcgtcacggccgggatcaactgatgcgcacgttaagcctg
gacacggaagaggacgtcaccgttctccctaatctttctccttgctcgctcagggcttcc
aagagtgacggaaccctcaagatgatgagcttcagtgggatgcaccggcgcaccaagctg
tccctggcctcttggagcaaggccttccacagcatccacaaagagaacgtgatcaatccg
gtcacgggttcgccagctcttatgactgtcgtcaagatggatcattccatccaccatgga
ccgttcagcgctgtcctacgcttcctctacactggtgagttggatgagaaggagaaggac
ctgatgaagatcgcccagatcgcagagatcttagaagtgtttgatcttaggatgatggtg
gagaacatcatgaacaatgagggcttcatgaatcaagaaatcacaaaagcgttccatgtg
agaaaggccaaccgaatcaaagagtgtcttgctaagaataacttcacagatgtggtgttc
aggttggatgacggcaccattaatgcccacaaaccactgctgatctctagctgtgactgg
atggctgccttatttgggggatcgttcatggagagtgcaaatgacgacgtctcattcccc
aacaccagcagggtatgtatgcaggcagtgctggagtatctctacaccaatcagctgtcg
cccatggcagaccttgacccaatggagctaatcgccctggccaacagactgtgccttcca
cggctcatcgccctgacagagcaatacgctgtgagcgagttagtaaaagcatctaaagat
ggacaggatatcgatggagaggtactcacctatctagagcttgctcagttccataatgct
aatcaacttgctgcctggtgtttacaccacatctgcacccattacaacaggatatgtgcc
aattaccggaaagagatcaagtcgaaatcaacagaaaaccaggaatattttgagaagcac
cgctggcctccggtctggtatctgaaagaggaagatcactatcagcgggtgaagaaggag
agagagaaggaggatgtggtgttgaataaacatcactcgcgatggcgctggtgtttctgg
agcacgtcccctgctgttgcttga
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