Garra rufa (doctor fish): 141298260
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Entry
141298260 CDS
T11039
Symbol
trub1
Name
(RefSeq) pseudouridylate synthase TRUB1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141298260 (trub1)
Enzymes [BR:
grf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
141298260 (trub1)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141298260 (trub1)
Prokaryotic type
141298260 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
141298260
NCBI-ProteinID:
XP_073684871
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All DBs
Position
22:complement(27219518..27224993)
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AA seq
286 aa
AA seq
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MAVQNSSLSKLQSLNGIFAIYKKQGPTSADVLNTLKKALLKEAGVANPNPRKRKKQPLKI
GHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGKGTDTLDATGNVVEEKSY
DHITKEAFEEKLKQFTGEIMQVPPLYSALKKDGKRMSVLLKQGHEVEAKPARPVTVYNLS
LQDFSPPHFTLDVECGGGFYVRSLVDDLGKALSSCAHIKELTRTKQGQFTLEEHVLKEDR
WTLTDISQALQPCPMPSQQEKNDKNAKSKHKKTPSESEGDDKDQNE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacagaacagttcactatccaaattgcagtctctgaatggtatatttgccatt
tataagaagcagggtcctacttccgcagatgtgttaaacacactgaagaaggcgctttta
aaagaggcaggtgttgcaaatcccaatcctcgcaaaaggaagaagcaacctttaaaaatt
ggtcacggcggcaccctggacagcaatgcttctggtgtacttgtggttggaattggtgaa
ggaacaaagatgctcaccacaatgcttgcaggatcaaaaaaatacagagctgttggagaa
ttaggcaaaggaactgatactcttgacgccacaggaaatgttgttgaagagaagagttat
gatcacatcacaaaagaggcttttgaagagaagctgaagcagtttacgggtgaaattatg
caggttccacctctatattcagcattgaagaaggatggcaagcgcatgtctgtcctgctc
aagcaaggtcatgaggttgaggctaaacctgcacgtcctgtcacagtgtacaacctctct
ttacaagacttcagcccgccacatttcaccttagatgttgagtgtggaggtgggttttat
gtcagaagcttggttgatgatcttggaaaagctctatcatcctgtgctcacatcaaggag
ctcactcggaccaagcagggtcagttcacactggaagagcacgtattgaaggaggaccgc
tggacgttgacagacatctcacaggctctgcagccctgcccaatgccatcacagcaagag
aagaatgacaagaacgcaaaatcaaagcataagaaaaccccatctgaaagtgagggtgac
gataaggatcaaaatgaataa
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