Garra rufa (doctor fish): 141298362
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Entry
141298362 CDS
T11039
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141298362
Membrane trafficking [BR:
grf04131
]
Protein recycling
Others
Retriever complex
141298362
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
141298362
NCBI-ProteinID:
XP_073684958
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Position
22:11863075..11879194
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AA seq
822 aa
AA seq
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MKLLSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNLSQQDYVNRIEELNQSLKEAWS
TDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGGLVYDRIWSMCADPQPLP
ESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAALLKCNRFLTKSGIQETLQRLTA
MIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFDLLASFRQIHGESVQNQLVLQR
VEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKKLGNNALLLNSVMWAFRAEFVA
TRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPESERLSILNEAWKVITKVRSPRD
YINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFEDAYPQLQSVIKKILTYFNDFS
VLFSMEKFLPFMDMFQKDSVRVEVCKSIMEVFIKHQQEPTRDPVILNALLHICKTMHDSV
NALTLDDEKRALSLLINGFIRMVSFGRDFEQQLSFCVEARATFCNLEPVIIHLIHTVNQL
AMETSRVMKGNHSRKTAAFVRACAAYSFITIPSLTSIFSRLNLYLLSGQVALANQCLSQA
DAFLKAAVSLLPEVPRTISIEGKQRSSEPFLLDFINNFLSTLLVVPDHPEQGVLYLVRGL
LNMVQDYTWEDNSDAKIRVYVSALPLLAAMSQESYLYTISKVDSNETLYGGDPKFIAEIN
KLCETLIGQVLDHLKGLGRDEGVRRQGSLAFSLFGCLLAHGDLRNNKLNQLTVNLWNLSH
KHGFCDTRTSVRTLEYIKHQAQQADMSHLSDMTARLSLQSRA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaaactactaagtaaagcatccagtcctagctcagcagtgtcagagaaggtgcgcact
cgtctggaggaactggatgacctggaggagggctcacagagggagctgttgaacctgtcc
cagcaagactatgtcaaccgcattgaagagctcaaccagtctctaaaggaggcctggagt
acagaccagaaagtcaaagccctgaaaatcgtcatccagtgttccaagctgctctctgat
acgtcagtaattcagttctaccccagcaagtttgttctcattacagatatcctggacacc
ttcggtggtctggtgtatgacaggatctggtccatgtgtgctgaccctcaacctctacca
gaatcgttctccgctgatgatgtgaatgacacagccaaagagacctgcctcaactggttc
tttaaaatcgcctcaatcagagagcttgttcctcgattatatgttgaagctgctcttttg
aaatgcaaccgcttcttaacaaagtctgggattcaggagacgctgcagaggctgacagcg
atgatcagaggaataggagacccgttggtggctgtatacgcacgggcgtatttatgcagg
gtgggaatggaggtggcgccacatctgaaggacagtcttaataagaatttcttcgacctg
ctggcctcgtttcgtcagattcatggtgaaagtgtgcagaatcagctagtgctgcagcga
gtggagattcccatctatctgaccctctattctcctgctatacactggatcctgcagtgt
gtagcatacagagcaccagaggttctgctaacagagatgatggacagatgcaagaagctg
ggcaacaatgctctcctgctgaactctgtcatgtgggcattccgggcagaatttgttgca
acgagagcaacagactttattggcatgatcaaagactgtgatgaagctggatttcccaag
cacctgttgtttgcctctctgggtcgcagtctgtcctgtgctgaccccccagagagtgag
agactctccatactcaacgaagcctggaaggtcattactaaagtgcgaagtccaagggat
tacatcaactgtgctgagatttgggtggagttcacctgccgtcactttactaaacgggag
gtgaacacggttcttgcagacatcattaaacacatgactccagacagagcttttgaggat
gcatatccacagttgcagtcagtgataaagaagatcctcacctacttcaatgacttctca
gtgctcttctcaatggagaagttcttgccctttatggacatgttccagaaagacagtgtg
agggtggaagtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaaccaacg
agagatcctgtcattctcaatgcgctgctgcacatctgtaagaccatgcatgactctgtc
aatgctctaactttagatgatgagaaaagagctttgtctttgctgatcaatggatttatt
cgtatggtgtcatttgggagggactttgagcagcagttgagtttctgtgtggaggccaga
gcgactttctgtaacctagagcccgtcatcatccacttgatacatacagtgaatcagtta
gcaatggagaccagccgcgtaatgaaaggcaatcactctcgcaaaacggctgcttttgtc
agggcatgtgctgcctacagtttcatcaccattccatccctcaccagtatcttcagccgt
ctcaacctctatctgctttctggacaggtagcgttggccaaccagtgtctatcccaagct
gatgcatttctaaaagcagcagtcagtcttttgccagaagtcccacgaaccatcagcatt
gagggtaaacagcgatcatctgagcccttcctcctcgacttcattaacaacttcctctcc
acactgctcgtagtaccggatcatccggagcagggtgtgctgtatctggtgcgagggctg
ttgaatatggtgcaggactacacctgggaggacaacagtgacgctaagatccgcgtctac
gtcagcgctttaccattactagcagcaatgagccaagaaagctatctctacactatttct
aaagtggattccaatgaaaccctctatggaggagatcccaagttcatcgcagagatcaac
aagttgtgtgagactctgattggacaggttctggatcatttgaaggggctgggccgagat
gagggagtgcgcagacagggcagtctggctttctctctgtttggctgtctgttggctcac
ggtgatctacgtaacaacaaactcaatcagctgactgtcaacctgtggaacctcagccac
aaacacggcttctgcgacacgcgcacatcggttcggactctagagtacatcaaacatcaa
gcgcagcaggcagacatgagccatctctctgacatgacggcacgtctgtcattgcagtcc
agagcttga
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