Garra rufa (doctor fish): 141298365
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Entry
141298365 CDS
T11039
Symbol
tcf7l2
Name
(RefSeq) transcription factor 7-like 2 isoform X1
KO
K04491
transcription factor 7-like 2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04310
Wnt signaling pathway
grf04520
Adherens junction
grf04916
Melanogenesis
grf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141298365 (tcf7l2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
141298365 (tcf7l2)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
141298365 (tcf7l2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141298365 (tcf7l2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141298365 (tcf7l2)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
141298365 (tcf7l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141298365
NCBI-ProteinID:
XP_073684960
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Position
22:complement(28025562..28119169)
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AA seq
635 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMISFKDEGEQEEKISENSSAERDLADVKSSLVNESETNQNSSS
DSEAERRPPPRSESFRDKTRESLEEAAKRQDGGLFKSPPYPGYPFIMIPDLTSPYLPNGS
LSPTARTYLQMKWPLLDVQAGSLQSRQALKDARSPSPAHIVGPFCLEFPGQTDLSLHQFQ
LSNKVPVVQHPHHVHPLTPLITYSNEHFTPGNPPPHLQADVDPKTGIPRPPHPSDISPYY
PLSPGTVGQIPHPLGWLVPQQGQPVYPITTGGFRHPYPTALTVNASMSSLLSSRFPHHMV
PPHHSLHTTGIPHPAIVTPNVKQESSHSDIGSLNSSKHQDAKKEEEKKKQPHIKKPLNAF
MLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGW
SARDNYAGNYQGKKKKRKREKQAGEGNEHREYFPNPCLSLPPITDLSAPKKCRARFGLDQ
QNNWCGPCRRKKKCIRYIQGEGSCASPPSSDGSLLESPPSSPSMVSPSPSSKESKSQTEQ
MQPLSLTMKPPPLLSSSQHQHLSMAPPPPLSLLDNSGAGKTSGSAHNGSLDPSDVSSSRP
TGSASSRPTSACHSHSLLPSSATTQPLSLVTKSID
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctgaacggcggtggaggggacgatctgggtgcgaacgatgaaatgatttcc
ttcaaagacgaaggcgagcaggaggaaaagatttcggagaactcctcagcagaaagggat
ttagcagatgtcaagtcttctctcgtaaacgagtcggaaacgaatcaaaacagctcttcg
gattccgaggcggaaagacggcctccgcctagatctgaaagtttcagagacaaaacaaga
gaaagtttagaggaggctgcgaaaaggcaagatggagggctgttcaagagcccaccgtac
ccgggctatccatttataatgattcccgacctcacgagcccgtacctcccgaacggatcg
ctctcaccgaccgcacgcacatatcttcagatgaaatggcccctgctagatgttcaagca
ggaagtcttcagagtagacaagcacttaaagatgccaggtcaccttctccagcacacatc
gttgggcccttctgcttggaattccccggacagaccgatctgagtcttcaccaatttcag
ttgtctaataaggtccccgtggtacagcaccctcaccatgtgcacccgctcacacctctg
atcacctacagcaatgagcacttcacgcctgggaacccccctccacatctacaggcagac
gtggaccccaaaacaggaatcccaaggcctccacatccttcagatatatccccctactac
cccctgtcacctggcactgtaggccagattccccatccgttaggatggttagtaccacag
caaggtcaaccagtttacccaatcacgacgggaggtttcagacacccctacccgactgcc
ctcactgtcaatgcgtccatgtcaagtcttctctcctccaggttccctcatcacatggtg
cccccccaccacagtttgcacaccacaggaatcccccacccagccatcgtcacgcccaac
gtcaagcaggagtcttctcacagtgacatcggctccctcaacagctcgaaacatcaggat
gcgaaaaaagaagaggaaaagaagaagcagccacacataaagaaacctctgaacgcgttc
atgctttacatgaaggaaatgagagccaaagtggtggcagaatgcacactgaaagagagc
gcagctatcaaccagatcctaggccgaaggtggcatgctctgtctcgagaggagcaggcc
aaatactacgagctagccaggaaagaacgacagcttcacatgcagctgtaccccggctgg
tcggcacgagacaactatgcgggtaactatcaggggaaaaagaagaagagaaaaagggaa
aagcaggcaggagagggcaatgaacacagagaatattttccaaacccttgcctttcactc
cctccgattacagatctgagcgccccaaagaagtgtcgcgcacgcttcgggctcgaccag
cagaataactggtgtgggccatgcaggagaaaaaagaagtgcattcgctacattcaaggt
gaaggcagctgtgccagtcctccttcttcggacggaagcttactagagtcccccccatcc
tctccctccatggtctctccctccccgtcctcgaaagagtccaaatcacagactgaacaa
atgcaacctctctcactgactatgaaaccaccccccctgctctcgtcgtcccaacaccaa
cacctctccatggctccgcctccacccttatctctgttggacaactccggggcgggcaaa
acgtccggctcggcacacaacggctccttggacccctcagacgtgtcgtcgtcccgaccc
acaggctccgcctcctccaggcccacatcggcgtgtcattcccactctctgctgcccagc
tccgccacgacgcaacccctttcgctcgtaaccaagtcgatagactag
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