Garra rufa (doctor fish): 141298865
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Entry
141298865 CDS
T11039
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141298865 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141298865 (pom121)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141298865 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
141298865
NCBI-ProteinID:
XP_073685286
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Position
23:13806489..13819940
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AA seq
1194 aa
AA seq
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MSPEDKRRLVVFSAAVFSLFLLLLVLSYIPAYLYILFICVVSCVVYFHKAEELQLFERLG
LNPRRGLSVPSALLRWLPGRTLSGVPAAGRNKIRKSDARNSFASPSDRHFAASYYRRDHT
LSDSVFSPRDILMGSYLAKAEESPSTAARPAGGSGAFMHPRNQLRERLARPNHAVHTPNR
RLSFGDPVGTASRFIITPQRHYPLQQTGTSPIGVMPPAKWDGIHRKNVLTQRNSPTVHSP
VTVKIARPDPTRSSFFNHLNSPEAVKSPGIGAQADPCSREAVLSVLRESRKREVDEEDRS
ASSGQKSKRRRHDSSGSSQSAFEPLLANGAPSQLVPKPGNLKRGMNSSLNEESIMKRSRT
SSISSVSGAPIPSGVPGSVRNPIRSSYSSSQGYPQRRAASSLSLSPFTSPGGSRCQTPER
AAKKAREEDATSPNSTSFVKLDKVATDPAPVSTKLTPKSEAPVVTSTSDSGGSSGKRKRK
IQLVTTNRGDQISLPPPPELGYTITVKDLDMEKKAALSQIQKVLEEPEPEIPPPAPEPTP
APALALSPSLSLFSQPAPTSSSGTAPAVSTAPSLSKPVSETTPATTTTPAPTIDLTITAA
SAASTAPLTFTSAPSITTTLAAPTAPTSSISNPLLESLKNMKNNPLLNAPSLLGTTTAAP
AVSMPTLSTPVAAATNLSSGIVKSESGPTVLQPSFSTLSSISTPVSKPATSMPSAFAQIL
AQPLQSSPSLSSLSGGSTMFSLIKPVATPASEPPKSTVTAPMATVASVNSISNPLSSGFK
PIFTSASTAEVKPTQPNFKPLFGAVSGISAFGQTATPTTSTPAAPVQKNSGMLFGGLTST
QPAKVPASSAAPTTQTPSQSLFGSWSTTTTSAPATNATFQFGGTSTTAAAPTLNTSTATA
SGTTSAFQFGAAKPAPAPAPQAQSTFTFGQLPANQNSTSTPFGGFGMTASTTTSSGTPTT
QTTFGSSTFTASSTFPASTQQTPAAPKPFTFGTGGGSAGGSSGAAPFMFGAAAPASTAAP
AFGTNSQPTFGGAGFSFGNTTTPSAAPTFGATTQTVAPLPAPAPTFNFGGASTATQIPAP
STPAPPASGGFNFGASLSAAPFGTQTPAAQTPGFSFGANNTDNKPAFGTSTPTFGQPSAG
MSMAFGSPGTPGFGAMGASPFGGASSAAFSIGTGSKTPGARRIQHPRRQHPRKK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgaagataaacggcggctagtcgttttctccgctgcggtgttctcgttattc
ctccttttactcgtgttgagctacataccagcttatttgtacatactttttatctgtgtc
gtgtcttgtgtcgtttattttcacaaagcggaggagttgcagctcttcgagagactaggc
ctcaatcctcgccgtggactgagcgtgccgtcggctctgctgcgctggttaccgggcagg
actttgagcggagtcccggccgccggcagaaacaagatacgtaaaagtgatgctagaaat
tccttcgcgtcacccagcgatagacactttgcggcctcgtattatagaagagaccacacg
ctcagcgactcggtgttcagccctcgggatatactcatgggaagttaccttgccaaggct
gaagaaagcccctccacagcggcgaggcccgctggaggctcgggggctttcatgcacccc
agaaatcagcttcgggagagactcgcccgacctaaccatgctgtgcacacccctaacaga
agactgtcattcggggaccctgtgggcactgcaagtcggttcatcatcaccccccaaaga
cattacccccttcaacagacggggacgtcccccattggagtaatgccacctgcaaaatgg
gatggaatccataggaagaatgtcctcacccaacgcaattcacctactgttcacagtcca
gtcacagtgaagatcgccagaccagaccccactcgatcatcattcttcaatcacctgaac
tcccctgaagcagtcaaatcgccaggtattggagctcaggcagacccctgctccagagag
gctgttctgagtgtgctcagagagagcaggaagagggaagtggatgaggaggacaggagt
gcttcctctggacagaagagcaaaaggaggcgacatgacagcagtggaagttctcagtca
gcatttgagccacttcttgcaaatggagctccctctcagcttgtgccaaaacctggcaat
ctaaagagagggatgaactcctctctcaacgaagaatccattatgaagcggtctcgcacc
tcctccattagctctgtaagtggtgctcctattcccagtggggtgccaggatctgtccga
aatcccattcgcagttcctacagctcttcacagggttatccacagagaagagcagcatcc
agtctcagtctttctcctttcacaagcccaggaggatctcggtgtcagactccagagcga
gctgccaagaaagcaagggaggaagatgctacctcaccaaattctacatcctttgtgaag
ttggataaggtggcaactgacccggcccctgtttcaactaaacttactcccaaatcagag
gcacctgttgtaacatcgacatctgactctggaggcagcagtggcaaacgtaagcgcaaa
atccagctggtcacaacaaacagaggagatcaaatttctttgccaccacctcctgaactt
ggctatacgatcacagtgaaagatctagatatggagaagaaagcagctctcagccagata
cagaaggtcctggaagagcctgagccagagatccctcctccagctcctgaacccacccca
gctccagctctggctctgtctccctctttatccctgttctctcagccagctccaacttct
tcatctgggactgcacctgccgtgagcactgcgccttctctctccaaacctgtgtctgag
accacaccagccactactacaactcctgctccaactatcgatctcaccatcactgcagcc
agtgcggctagtactgcacccctgacattcacctcagccccctccatcacaaccacccta
gctgctccaactgctccaacttcaagcatctcaaaccctctcttggagtccctgaaaaac
atgaagaataacccacttctcaatgctccctctctattgggcactaccactgcagctcca
gcggtgtctatgcccactctttctacacctgttgctgctgccacaaacctgagcagcggc
attgtcaaatctgagtcgggtcctaccgttctgcagccctcattctctaccctatcctcc
atatcaacacctgtctccaagccagccacctctatgccctctgcctttgctcagatcctg
gcccaacctcttcagtcctcaccaagcctatcatccctgagcggaggcagcaccatgttc
agtttgattaaacctgtggccactcctgcatctgagcctcctaaatctacagtcaccgca
cctatggccacggtcgcatcagtcaatagcattagcaaccccctgtcgtctgggtttaag
cccatttttacctctgcttccacagcagaggtaaaacccacccaacccaacttcaagcct
ttatttggcgcagtaagtggcattagtgccttcgggcaaacagccacacctacgacatca
acccctgctgctccagttcaaaaaaacagtgggatgttatttggcggactaaccagtacc
cagccagcaaaggtgcctgcctcatctgccgccccaaccacgcaaactccttcccagtct
ctgttcggaagctggagcacaacaaccacatccgctcctgccacaaacgccacgttccag
tttggaggcacatcgaccacagcggccgctcctacactgaacaccagcaccgctactgct
agcggcaccacctctgcttttcagttcggggcagcaaagcctgcacctgcacccgcccca
caggcccaaagcacattcacttttggccaactgccggcaaaccaaaactccacatccact
ccatttggtgggttcggcatgaccgccagtaccacaacgtcttcggggacacccacaacg
caaaccactttcgggagttcaactttcacagcatcatcaaccttcccagcatccacacag
cagacccctgcggctccaaagccttttacatttgggaccggcggtggaagtgccggtgga
agtagcggcgcagcaccattcatgtttggagcagctgctcctgccagcacagcagcgcct
gcgtttgggactaacagtcagcccacgtttggtggagctggcttttctttcggaaacacc
accaccccctctgcggctcccacctttggggctaccacacagactgtggctcctctccct
gccccggctcctacattcaactttggaggggcatcaacagccactcaaatccctgctcca
agtactccggcgcctcctgcctctggagggttcaactttggggcttcgctctcagcagca
ccgtttgggacccagacgcctgcagctcagacgccagggttttcctttggagccaacaac
actgataacaagcctgcatttggaacatcaactcctacttttggccagccatctgcagga
atgtcaatggcatttggcagtcctggaaccccaggatttggagcaatgggcgcctcacca
tttggtggcgcatcatcagccgccttctctatcggaacgggctccaagacccctggggcc
cgtcgaatacagcatccacgcagacagcacccaaggaagaagtaa
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