Garra rufa (doctor fish): 141299037
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Entry
141299037 CDS
T11039
Symbol
erbin
Name
(RefSeq) erbin
KO
K12796
erbb2-interacting protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141299037 (erbin)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
PDZ
LRR_LRWD1
LRR_13
LRR_5
PDZ_2
PDZ_6
LRR_NXF1-5
DUF3889
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
141299037
NCBI-ProteinID:
XP_073685414
LinkDB
All DBs
Position
23:38935115..39066717
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AA seq
1239 aa
AA seq
DB search
MSSKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEE
LPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINLRELDVSKNSIQEFPENIKNCKVLAIV
EASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSM
HKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFLPGMIGALKQLCYLDVSKN
NLEIVDEQISGCENLQDLLLSNNALTQLPGSIGSLKRLTTLKVDDNQLMYLPDTIGGLTT
LDELDCSFNEIEALPSTIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLETL
PEEMGDMQKLKVVNLSDNKLKNLPYSFTKLNQMTAMWLSENQSKPLIPLQKEEDPETHKT
VLTNYMFPQQTRTEDCEYLVMQNLQLSRPPDSEELSSEEEEMKIAEMRPPLIEISINQPK
VVALSKDKKDDGKDADSLLDETVANSNQNNSNCSSPSRMSDSVSLTTDSSQDNSLCTPER
ESKMPLVPKNGQEDENLNQLKQMTPLLQNCNGSETSLQTILKNQQSYESKSDPMADYSLS
MEERLALIEKGINNGVAEQYSKWDQINMNVAKFPPDNMVSYEDMGRTKSPSAKESMSSNN
NAMVSFENLENGNRIQKTHSGENFNGRTDQVPLRYESTRTVSTGVTALSDMSLSRSTEEL
SPEKKCPPAPVVKSQSIANMDGGGMKLYSIEGESPPYEVACATRTSVSGAQGQSIVRSKS
ASLLNDQPLQIYPGSSASSSDLLSGSKPPISTARYPTGPPPQYNIQYASSTVPKDNLWSQ
RTPVPPEQPYLPPQHSLANTNYSNRNNAPPYPQPQQRGPPKTPDMWAKERMLPTVSQRGT
LQRQGSGSSGTSMCMPDPRRMPGMEGEYMTYRDIHAAGRGPLQMSQALHRPLSARTYSMD
GPNAPRPQSARPPPHEVPERTMSVSDFNYQHGSPSKRPSMRVKSEHSLLDGPVSGGGRVP
ADWRDHVMRHIEAKKMEKSALSRSLATLTGSQSSLAFSAVDGWHIGAHGPSDDVFSPHGQ
QGYHIDTLRKVPLMNGQMCPPVRSPISCGQPPMARHPSREQLIDYLMLKVSQQPPGPPRV
PHETLQQELHVKIEKNPELGFSISGGVGGRGNPFRPDDNGIFVTRVQSEGPASKLLQPGD
KIIQANGYSFVNIDHGHAVSLLKTFPNTVDLIIVREMAA
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaagcggagtttgtttgtgcggctggtgccgtgccgctgcctgcggggcgag
gaggagaccgtcactacgctggactactctcactgcagcctggagcaggtccccaaagag
atcttcagcttcgagaagaccctagaggagctctacctcgacgccaaccagatcgaggag
ctgcccaaacaacttttcaactgccagttgctctaccgattgagtctaccggacaacgat
ctaacggtgttgccgccgggcatcgcaaacctcatcaatctcagggagctcgacgtcagc
aagaacagcatccaggagtttcctgaaaatatcaagaactgcaaagtcctggccatcgta
gaagcgagtgtgaacccaatatcaaaactcccagaaggcttcacgcagctcctcagcctg
tcccagctctacctgaacgacgccttcctagagtttctaccggccagctttggcagacta
accaaactgcagatcctggaactgcgggagaaccagttaaagatgttgccaaagagcatg
cataagctcacacagctggagcgcttggatctgggcagtaatgagttcactgaagtgcct
gaagtgttggagcagcttacaggaatcagagagctgtggatggatggaaataagctgacg
tttttaccggggatgatcggggccctgaagcagctctgctacctggacgtgtccaaaaac
aatttggagatagttgatgagcagatatctggctgtgaaaacctgcaggatctactgctg
tccaacaatgctttgacgcagctgccagggtctataggctcactgaaaagactgaccact
ctgaaggtggatgataaccagctcatgtacctacctgacacgataggaggactcacgact
ctggatgagctcgactgcagtttcaatgagattgaggcgctgccgtccaccattggccag
tgtgtgaacctgcgtacgtttgctgcagaccacaacctgctcgcacagatgcctccagag
atgggcagtttgaagaacgtcaccgttctcttcctgcactcgaacaagctggagacgctg
ccggaggagatgggcgacatgcagaaactcaaggtcgtcaatctcagtgacaacaagttg
aagaatcttccgtacagcttcactaaactcaaccagatgactgcgatgtggctgtctgaa
aaccagtcgaagcctctcattcccctgcagaaagaggaggatccagagacacacaagact
gtactcactaactacatgttccctcaacagacccgaacggaggactgtgagtatctagtc
atgcagaacctgcagctgtcgcgccctcctgactcagaggagctgtcatccgaggaggag
gaaatgaagatagcagagatgagacctccactcattgaaatttccattaaccagcctaaa
gtagtggccctcagcaaggacaaaaaagatgatgggaaggatgctgactctttgctggat
gagacagtggccaacagtaaccagaacaacagcaactgctcttcaccatcacgcatgtct
gattcagtgtccttgaccacagacagcagtcaggacaattccctctgcaccccagagaga
gagtcaaagatgcctctcgtccccaaaaacggacaagaggatgaaaacctcaatcagcta
aagcagatgacccctctactccagaactgtaatggctctgagacatccctacagaccatc
ctgaaaaaccagcagagctatgaaagcaagtcagacccaatggctgactacagtctctcc
atggaggagaggcttgccctcattgaaaagggcataaacaatggtgtggcagagcagtac
agcaagtgggatcagataaacatgaacgtggccaaatttccacctgacaacatggtttct
tatgaggacatgggcaggaccaaaagtccctcagccaaggagtccatgtcaagcaacaac
aatgccatggtgtcatttgagaaccttgagaatggcaatcggattcagaaaacccactct
ggggagaatttcaatggccggacagatcaagttcccttgaggtacgagtctacaagaacc
gtctcaacaggtgtaacagccttgagtgacatgagtctttctcgtagtacagaggaactc
tcgccagagaagaaatgtccaccggccccggtggtgaaatctcagagcatcgccaacatg
gatggcggagggatgaagctttactccattgagggagaaagccccccatacgaagtggca
tgtgcaaccagaacgtccgtaagcggcgctcaaggccagagcattgtccgctccaaatcc
gcctccttgctcaacgaccagccattgcagatctaccctggttcctctgcatcatcctct
gacctcttatctggctccaaacctccgattagcaccgcccgctaccccactggcccccct
ccgcagtacaacatccagtatgccagtagcactgtgcccaaagacaacttgtggagccaa
cgtactcccgtacctcccgagcagccctacctgccaccgcagcactcccttgccaacacc
aactattccaaccgtaacaacgcccccccatatccccagccccaacaacgtggcccaccc
aagaccccagacatgtgggccaaggaaaggatgctgccaactgttagccagcgtggcact
ttgcagagacaaggtagtggatcctctggtaccagcatgtgcatgccagacccacgtcgt
atgccaggaatggaaggagagtacatgacctaccgggacattcatgcagcaggccgtggg
cctctgcagatgagccaggctctccacagaccattgtcggcccgcacgtacagcatggac
ggacctaacgctccccggccacaaagtgcccggcccccacctcacgaggttccagaaagg
accatgtccgtcagcgacttcaactaccagcacggcagtcccagcaagagacccagcatg
agggtgaagtctgagcactcattgctggatgggccagtcagtggaggtggcagggtacca
gcagactggagagatcatgtcatgagacacatcgaagccaagaagatggagaagagcgct
ctctctcggtctttggccactctcactggcagtcagagctctctggcctttagtgctgta
gacggatggcacatcggagctcatgggcccagcgatgatgtcttcagtcctcatggacaa
cagggctaccatattgacactctaagaaaagtgcctttgatgaacggccagatgtgtcct
cctgtgagatctcccataagctgcggtcagcccccgatggcacgtcacccctcacgagag
cagctcatcgactatctgatgctcaaagtgtcccagcagcccccgggccctccgcgggtc
ccacacgagaccctgcagcaggagctccatgtgaagattgagaagaatcctgagctgggt
ttcagtatatcaggaggagttgggggtcgtgggaatcccttccgcccagacgacaatggc
atcttcgtgacgagggttcaatcagagggacctgcttcaaaactccttcaacctggagac
aagatcatccaggcaaacggatacagcttcgtcaacatcgatcacggccacgcagtatcc
ctcctgaagacgttccccaacaccgtcgacctgatcatcgttcgtgagatggccgcataa
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integrated database retrieval system
