Garra rufa (doctor fish): 141299127
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Entry
141299127 CDS
T11039
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
141299127 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141299127 (dcp2)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
141299127 (dcp2)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141299127 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
141299127 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
141299127
NCBI-ProteinID:
XP_073685512
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All DBs
Position
23:33311900..33323126
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AA seq
394 aa
AA seq
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METKRGEIPNGLLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNSPGLPQC
GIRDFAKAVFNHCPFLLPHGEDVQKVLEQWKEYKMGVPTFGAIILDETLDNVLMVQGYLA
KSGWGFPKGKVNEDEAFHDCAVREVLEETGFDIRDRICQKTYIEQKISDQLVRLYIIPGV
PKDTKFNPKTRKEIRNIEWFPLDKLPCHRNDMTPKSKLGLAPNKFFMAIPFMRQLREWIA
KHKGESTSSDEDFASNGSTPCKPFRSKPRKSQMLLEASPESWSKQKQQKPFGQPSQSELV
DVLKPKNHVKGNSKKHQESPNLKKSANGVSQQQKDDKKLQPRRLQDNFDTDAAGEVFGCN
GQADLCYGEYIVSSRSFLSFKFDREAIMKSCFES
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggagacaaaaagaggggagattcccaacgggctgctggatgacctttgcagtcgcttt
attcttcacatccccagcgaggagagggacaatgccatcagagtttgcttccagattgag
cttgcccattggttttacctggacttctgcatgcaaaattcaccaggattacctcagtgt
gggataagagactttgccaaggctgtttttaatcactgtccattcctgctgccccacgga
gaggatgttcagaaggttttagagcagtggaaagagtataagatgggtgtgcctacgttt
ggtgccattattctcgatgaaacacttgacaatgtgttgatggtccagggttatctggcc
aagtctggctggggttttcctaaagggaaagtcaatgaagatgaggctttccatgactgc
gctgtgagagaagttttggaggagacaggctttgacatccgagatcgtatctgccagaaa
acatatattgaacagaaaatttcagatcagttggttcgattgtacatcataccaggagtt
cctaaagacaccaagtttaaccccaagaccagaaaagaaataaggaacattgaatggttc
ccactggataagctgccttgccacaggaacgatatgactccgaaatcaaagcttggactg
gctcccaacaagttttttatggctattccatttatgaggcagctcagagagtggatcgcc
aaacacaaaggagagtcaacgagcagcgacgaggattttgcgtccaatggcagcacacct
tgcaaaccattccgttctaagcccagaaagtctcagatgttgttggaagcatctcctgaa
agctggtcaaagcaaaaacaacagaaaccctttggacaaccctcccagagtgagttagta
gacgtgcttaaacccaagaatcatgtgaaaggcaacagcaagaaacaccaagagtctccg
aacctgaagaaaagtgctaatggtgtcagtcagcagcagaaagatgacaagaaacttcag
cccagaagactgcaggataactttgacacagatgcagctggtgaagtctttggctgtaac
ggacaggcagacttgtgttacggggaatacatcgtctcctcgcggtcttttctcagcttt
aaatttgaccgagaggccatcatgaaatcctgctttgagtcctga
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