Garra rufa (doctor fish): 141299161
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Entry
141299161 CDS
T11039
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141299161 (paxbp1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141299161 (paxbp1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
DUF1604
Motif
Other DBs
NCBI-GeneID:
141299161
NCBI-ProteinID:
XP_073685556
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All DBs
Position
23:complement(21241664..21266797)
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AA seq
905 aa
AA seq
DB search
MFKKAKRCNFRRRNDSEDEEKEENQQSGGPAAEDLTKPSESTTITTITTGPAPATSMINN
HGNGFQPAAFKSNKEKKRKKENREEAKASLLSFQDDEDETEVFRVKKSNHSKKIVKQLKK
EYKEDLEKTGNVIQDQNTRIGGPAQILSIKEEPLEGSRASSEQGEEEMEVDSNEEQEVDG
EQKPAGGAFSQTLSALSSLRPGEIPDAAFIHAARKRRQMARELGGEAPLVENEVTNKRLT
HEDENGGSDDEDEQRIVFSGVKMKSQRQKIAEEIGIEGSDDEALDDGQDEEVSRWEQEQI
RKGISIPQVQTAQSEEPTMYYQGSYDAQPYGASYAMPFSYAAATVGADNSKPLKAEPSVP
YPIPSCDLTPITTDLVKKRLKDRLSFMRHGHDSNARRFEQIQEELEASKKTIQLLEGSSQ
EAADKYRFLQEMRGYVGDLLECFSEKVPVILELEVAMHQLLRQRASRLVQRRQDDIKDES
SEFSSLSSKAVMAPNLDSFGRDRTAYQELAKQRRIAEREARRTRRRQAREQNGKRAEHKE
GLSSDDEETSTDITSFFSEKDRILKESKKVFEDVMEDFHSLDNIKSHFETWRKLYFTCYR
DAYIGLCLPKLFNPLIRLQLISWSPLEVECPNFEYMLWFESLLFYGCGEQSALRKEEDVD
NSLLPAIVERVLLPKLAVLTDQVWDPLSNSQTSRLVSFMQRLIKAYPTVMHGDNRNTQEL
LRTIVMRIRRTLDDDIFLPLFPKNVMENKNSGPYLFSQRQFWSCVKLLGNILLWDGILSP
SVLKELAVDSTLNRYILSALQTTDVNEEHVEKSRRVVECFPVQWFSSLKGQQTLPQLENF
CRFLKHLASSLYRTCVAGSDVEKRNVRDHIKEVVRLLGRLNALDHVIAVASEHGIKDIKT
ILENK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaagccaagaggtgcaatttcagacggaggaatgactcggaagatgaggag
aaagaggagaaccagcagtccggcgggcccgcggctgaagatttgacgaagccgagtgag
tccaccaccatcaccaccatcaccaccggccccgctcctgcaacaagcatgataaacaat
cacggaaacggatttcagcccgctgctttcaagtccaacaaagagaagaagagaaagaag
gagaaccgagaggaagcgaaagcgagtctgctgagcttccaagatgatgaagatgagact
gaagtgttccgtgtgaaaaaatccaaccacagcaagaagattgtcaagcagctgaagaaa
gaatacaaggaggatttggaaaagaccggcaatgtcatacaggatcaaaacacacgcatt
ggtggacctgctcagattctgtcaattaaagaggagcccttagagggcagcagagccagc
agtgaacaaggagaagaagaaatggaggtggacagcaatgaggaacaggaggtggatggc
gagcaaaagcctgcgggtggagcgtttagccagactctgtctgctctcagctctcttaga
ccaggcgagatccccgatgcggccttcattcatgctgctcgtaaacgaaggcagatggct
cgagagctcgggggtgaagctccgctggtcgagaatgaggttacaaacaagcggctcact
catgaagatgagaacggcggcagtgatgatgaagacgagcaaagaatcgtcttcagtgga
gtcaagatgaagagtcaaaggcagaaaatagctgaggagatcggtattgaaggcagtgac
gatgaagctctggatgatgggcaggatgaggaagtgagtcgctgggagcaggagcagatt
agaaagggcattagcatcccacaggtccaaaccgcccaatccgaggaaccaaccatgtat
taccaaggcagttatgatgcacagccgtatggagcttcctacgccatgccctttagctac
gccgctgccacagttggagcagacaacagcaagcctttgaaagcagagccatcagttcct
tatcccattccctcttgtgacctgacccctataaccacagatctggtaaagaaacgcctc
aaagacaggctgagcttcatgcgtcatgggcacgattccaatgcccggcgctttgagcag
atccaggaggagctggaggcctccaaaaagaccatccagctcctggagggctcctcacag
gaggccgcagacaaatatagattcttgcaagaaatgcgagggtatgttggagacttgctt
gagtgtttcagtgaaaaggtgcctgttattctggagctagaggtcgccatgcaccagtta
cttcggcagcgggcgtcccgtctcgtccagagaagacaggatgatattaaagatgaatcg
tcggagttttccagcctttcaagtaaggctgttatggcccctaacttggattcattcggt
agagatcgcacagcctatcaggagctggccaagcagaggaggatagctgaaagagaagcc
agacgaactcgtcgcagacaagctcgagagcagaacggcaagagagccgagcataaggag
ggactgtccagtgatgatgaagagacgtccactgacataacaagcttcttctcagaaaaa
gatcgcattttaaaagagtcaaagaaggtttttgaagacgtgatggaggatttccactca
ctggacaacataaagtctcactttgagacctggagaaagctgtatttcacttgctataga
gacgcctacatcggactgtgtctgcctaaactcttcaacccccttattcgactacagctc
atctcatggtctccactggaggtggagtgtcccaactttgagtacatgctgtggtttgag
tctttgctcttctatgggtgtggggagcagagcgcgttgaggaaagaggaagacgtagat
aacagcctgcttcctgcaattgtggaaagagtactgcttcctaaattagcagtgctgacg
gatcaggtgtgggatccgctctccaacagtcagacgtccagattggtgtctttcatgcag
aggttgattaaagcctatcccactgtgatgcatggcgacaaccgcaacacacaggagctc
ctgaggaccatagtcatgcgaattcgacggactctcgatgatgacattttcctgcctctg
tttccaaaaaatgtaatggagaacaagaactctggtccttacctcttttcccagagacag
ttttggtcgtgtgtgaagttacttgggaatatcttattatgggatgggatcctgtctccg
tcagtgctgaaggagctcgccgtggacagcacactaaaccgctacatcctctcagccctc
cagaccacagacgtaaacgaggaacatgtggagaaatcccgcagggtggtggagtgtttt
cctgtgcagtggttcagcagtctaaaaggacagcagactcttcctcagctggagaacttc
tgcagatttttgaaacacctggccagcagtctttaccgcacctgcgtggctggatcagac
gtggagaagagaaacgtgagggatcacataaaggaggtggttaggcttttgggacggctc
aacgctttagaccacgtgatcgccgttgcgtcagaacacggcattaaagatataaagact
atccttgagaacaaatga
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