Garra rufa (doctor fish): 141299364
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Entry
141299364 CDS
T11039
Symbol
thsd1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141299364 (thsd1)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
141299364 (thsd1)
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Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
141299364
NCBI-ProteinID:
XP_073685820
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All DBs
Position
23:complement(21008690..21018665)
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AA seq
871 aa
AA seq
DB search
MTQGFPTATPFVLLFLMGFAMAGIDLWPSMHIALSNASVFVDYSTESNFTDHRITVSLID
IDRNVTVLFRSLPSNQSEGSLEFNCSCFLYAGNFRFRLEQKHNLGVSNRSAIWWWSPVLH
VHWPTFHLAVDRGSNNRSSNDFRIGVYTNDNFHPCSSSKASTVFLDVSYLERVQIGRNTF
EKVQNRIRHNIKVVRSQHVEMPCASPLTEHGFIQISLKSPHIEQDIKSSDPLYLSSIFSY
KLLVDNIYKSGCEGSVSVRRLAPPCTVTSGKVLLYKEESNDMAVPTQLAFNFLTQGENET
EFNCSIFDPGRNKYCFHFTLVYSMAPSLAHTCVIVQRHTRMWGPWQPWSGCSVTCGEGVR
ERVRECLLPSSGGMQCTGMVREQSHCSLEDCTEELPPPPLTPPPAVNSPLTGNLVVVAGI
FLCLAVILATIFITVWRKLCRAPKCSSMRRGSLHSPSGRKNSDEASICGHSLQRPSFSES
LQTVPLQKGLTLPTKQGPSDRGVLARQQSMTLPLPLSQDPERMSPSGQKILPPIFGYRLA
QQQLKEMKKKGLREATQVYHVSQSPVDDTMLEAMTSTPTGLTPVPQELDSPEESSSSHFR
IRSAFTEPTWPPKNNTLSDRQKVDLLLSPPKSSFSANSQRLERTADWVEMVERSRAPYSK
NPNFRRTSSFHENNQQQLPLSRPFRERSMTQVTPRQLPEGSCRSRPWEHTLPELEVWSCS
SPRITNSSVDHRRRPWIDTPPSQSTSKDSVPVTPTKEPLVDRHHVARSPSSGLDRAERAE
QNWSRRGPSPIQRNILARKLKEANSSTCQRQRSSTFSTSEQRRGRCRSLPLSADYSNSPY
ILTESEQHMMDISGYLGEDDGVEVLTIHKLT
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacagggtttcccaacagcgaccccatttgtgctgctcttcctgatgggatttgca
atggctggtattgatctctggccatcaatgcacatcgccttgagcaatgccagtgtgttt
gtggattacagcactgaaagcaacttcaccgaccacaggataacagtatcattgattgac
atcgacaggaatgttacagtactcttcaggtcgcttccctccaaccaatcagaagggtca
ctggagttcaactgctcttgcttcctgtatgcaggtaatttcagattcagactggagcag
aaacacaaccttggcgtgtctaacaggagcgccatctggtggtggagtccagttctgcat
gtgcactggcccacctttcacctggctgtggatcgtggcagcaacaaccggagctctaat
gactttaggattggagtgtacactaacgacaacttccatccttgttctagcagcaaagct
tcaactgtcttccttgatgtcagctacctggaacgagtccagatagggaggaacaccttt
gagaaggtgcagaaccggataagacacaatattaaagtagttaggtcacaacatgtggag
atgccatgtgcgtcccctctgacagagcatggcttcatccagatttccctaaaatcccct
cacatcgagcaagacatcaaatcctctgatcctctttacctgtccagcatcttctcctac
aagcttcttgtggataacatttacaaaagcggctgtgagggatccgtgtctgtccggcgt
ctcgctcctccctgtacagttacaagtggaaaagttctgctttataaggaagagagtaat
gacatggctgttcccactcaactagccttcaattttctcacacaaggggagaatgagact
gagtttaactgctccatctttgaccctggaaggaataagtactgcttccatttcacactc
gtctacagcatggctcccagtttagcacacacctgtgtgattgtgcaaagacatacaaga
atgtggggaccttggcagccatggagtggttgtagtgtgacgtgtggggaaggggtgaga
gaacgtgttcgtgaatgtctgctgccctctagtggtgggatgcaatgcactggcatggtt
agagagcagtcacactgttcactagaagattgcactgaggagcttccgcctccacccctc
acccctccgccagctgtgaactcgcccctaactgggaatctagtggtagtggctgggatc
ttcctgtgcctggctgtgatcctggccactatctttatcacagtatggcgaaaactctgc
cgtgcaccaaagtgcagctccatgcgccgtggctctttgcactctcccagtggtcggaag
aactctgatgaggcttctatctgtggtcacagcttacagagacccagtttctcagaaagc
ctccagacagttcctctacagaaaggacttaccttgcctacaaagcagggaccttcagac
cgaggtgtgttggctcgtcaacagagcatgacccttcctcttccactatctcaagaccca
gagaggatgtccccttctggccaaaagatccttccacctatttttggctaccgcttggct
caacagcagctcaaggagatgaagaagaagggtttaagagaggccactcaagtctaccat
gtctcccagagtccagtcgatgacaccatgctagaggcaatgacttcaacccctactggt
ctaactccggtgccccaagagcttgacagcccagaggagtcaagcagcagccatttccgc
ataaggtctgcctttacagaacccacgtggcctcccaaaaacaacactttatcagacaga
caaaaggtggacttgttgctgagtcccccgaagtcttcattcagtgccaactcacaacgt
cttgagcgcacggcagactgggtggagatggtagagcgcagtagagcgccatactccaag
aatcccaacttcaggagaacttcaagcttccacgagaacaaccaacagcagctgcccctg
tcccgacccttcagagaaagaagcatgacccaagttactcctcgccagctaccagagggg
agctgtagaagcagaccctgggagcatacacttcctgaacttgaggtctggtcttgttcc
agtcctagaataactaatagctcagtggaccacaggagaagaccgtggattgacactccc
ccatctcagtcaacctcgaaagattcagttccagtaacaccaacaaaagaacccttggtg
gatcgtcatcacgtggctcgaagcccatcttctggactagaccgagctgaacgggcagaa
cagaactggagcagaagaggcccctctcccatccagaggaacatactagccaggaagctc
aaagaggctaattcatctacctgccaaaggcaacgcagttccacattttctacctcagag
cagcgcagggggcgctgtcgcagccttcctctctctgcggactacagcaactccccatat
attctcacagagtcagaacagcacatgatggacatttctggatacttgggtgaagatgac
ggagtggaggttctgactattcataaactcacctga
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