Garra rufa (doctor fish): 141299391
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Entry
141299391 CDS
T11039
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141299391 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141299391 (rsf1b.1)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
141299391 (rsf1b.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
DDT
WSD
Motif
Other DBs
NCBI-GeneID:
141299391
NCBI-ProteinID:
XP_073685853
LinkDB
All DBs
Position
23:complement(11518849..11534810)
Genome browser
AA seq
1656 aa
AA seq
DB search
MSASEAADGSSPELCPSFAVICSFLERYGALLDLPEVSFPELERSLQESSAVPKLLVDLH
VKLLRKIGKSVSADRWEKNLIKICQEFNTTWAWELEKKGYREMTVECKTGILKYLCECQF
DENVKFKTAINEEDPDKMRLQPIGRDKDGLMYWFQLDQDHNVRIYVEEQDDLDGSSWKCI
VRNRDDFAQILGLLKTQIDPELLVKKDQEEGSSSNSPNPDNEENKKKEGAEYEKSQNDLS
ASENKENILEKNNAKQKDTETTDGLSEKGLKVKEELQKHSETENGTGVITVSIKEERQDE
EEKAKSLSTPSQNAEQTEDVKRKTLEETQRALKNDHQAKIPLKKREMKLSEDFDSNSTGV
RNAPVAPVKESQTCFDDSRSSAEKINGHVPHLTSSESESQKGSESLQKESTKESKSENLP
LDLDKSKERKKEKKDDQAEEKMDTNETRSCADEQMEVEKPEQSCAEENKEKSATSQFHKK
TSGKEDPSSVSKQSEKTPGSEEVTDNKKSPSADNMDATEVNTSTLPEESKKEESMKGLAN
KESTKDVSKEATKDLPDKESSKELARDESVKHLSEEEKSIEKSTKDASEKAMKESPKESI
KDLSKGEAAKEESIEDLSKEETSERQSKKDLTEKGQQSPKDSNEDHEKPDPTASTPMETE
PFQSSKKEKSSSREVIKPHSGTEKSENAEKTKPQNSSGDTITEKEPTAIVSKSEGDKVST
NGKSESIASKPSEDSDGPQDKAQKQSASPKFASSDLEKSSVSDSTNKPSTPKTTEKGDSE
EKCDTAETDKNENLETSKDKDEKGEAANSSEESGAKKSKEVKATEQPSKSKRSKKHEKEP
DSEEGNKEKPMEVDSEISKADKIQSETTTTSKKETDVPLDQNTTSSKQSKQDATSEERKA
SGDVREKSNAAVKSSKRPGRPPKKAQESQDEEKTGEEQEEKPRQEGIRMKIKIPAHGRKA
ELQREEPRGDSESEMTDSRCLRRSPRICRPTAKAVEIQDRRAERKQATPVSEKEKDDKED
KEEEDSVQKRPRKAEPDGQTKPKQVGRRRKRQPWSRMRRKKKCSDDDDDEEEESESEEEE
TEEDDSDEDYKVEKTRKRRRNRNRERNSSDSSTSSSENDEPNDDPCKHCGLPNHPELILL
CDSCDNGYHTACLRPPLMIIPDGEWFCPPCQHKQLCDRLEEQLQNLDAVLKKKERAERRK
ERLVYVGISVENIITPSVEVEEEKEELVKEKKDVKKSKSWGRRSTRAKKCISYRFDEFDE
AIEEAIEEDIKEAEGGGAGRGKDMANITGHREKDMSTILQEDGKENGRPRRTSAAQKKKR
RRLNDLDSDSTVDEDESEDEFRLSDSSEDEEFAASDNAESEAEVPSYEDSDFGSDVDRPR
RRQPPRKRRKPKGYSDEEELETDEEEEEEEMATEGSSEFSDSDLDVRCRRSYRSRKQEVN
YCESSDSDGSQASTNKDKKKKRRRLSSSDSEVSFQSGESEEEERKPKKIRADSSEEESRK
RRRRLSLKRRRESEDDDDDDDSDESEEEERPVRKRVNRIDSDDSESEEEVKKSPSEKEKE
KKEEKEKETEETVAKGPSPLDYNLAELPPTNGQSPVKGLEGLIPRPAAGVTPKNGNAPSA
VSIAPNGMEIPAQDEDEDDLLGVTDLVDYVCNSEQL
NT seq
4971 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcctcggaggcagcggacggttcttccccggaattatgcccgagctttgccgtg
atctgctcgtttctggagcggtatggagctctgctggacctgccggaggtgtcgttcccg
gagctggagcgcagtctgcaggagagcagcgcggtacccaaactcctcgtggacctccac
gtgaagttactgaggaaaattggcaagtctgtatctgcagacagatgggagaagaatctc
attaagatctgtcaggagtttaacaccacatgggcatgggagctggaaaaaaagggttat
cgggagatgacagtggagtgtaagacaggaatattgaagtacttgtgtgaatgccagttt
gatgaaaatgtcaagtttaaaaccgctatcaatgaagaggacccggataaaatgcgtctt
cagcccatcggcagagacaaagacggccttatgtactggttccagctagatcaagatcat
aatgtgaggatctacgtagaagaacaggatgatctggatgggtcatcttggaagtgtata
gtaaggaatagagacgactttgctcaaatccttggattgttgaaaactcagattgatcca
gagcttttggtaaaaaaggatcaggaggagggctcatctagtaacagtccgaacccagac
aatgaagagaacaagaaaaaagagggagctgaatatgagaagtcacaaaatgatttgtct
gcatctgaaaataaggaaaacatcttggagaagaacaatgcaaagcaaaaagatacagag
acaacagatggtttgtcggaaaaaggcttaaaggtgaaagaagagctgcagaaacattca
gagacggagaatggcactggcgttattactgtatcgatcaaagaagagcgacaggatgag
gaggagaaagccaagagcttgtcaacaccttcacagaatgcagaacagacagaggacgtg
aaaagaaaaactttagaagagactcagagagctttgaaaaatgaccatcaagctaaaatt
cccctgaaaaagcgggaaatgaaactaagtgaagactttgacagcaacagcactggagta
cgaaatgctcctgtcgctccagtgaaagaatcacagacatgtttcgacgacagcagatcg
agtgctgaaaagatcaacggccacgttcctcaccttacatcatctgagagtgaatcgcaa
aaagggtcagagagtcttcaaaaagaaagcacaaaggagagcaagtcagaaaatctccct
cttgatttagataaatccaaagagagaaaaaaggagaaaaaggatgaccaggcagaggag
aagatggacacgaatgaaaccagatcgtgtgctgacgagcaaatggaagtggagaagcct
gaacaatcctgtgctgaggagaacaaggaaaaatctgcaacttctcaatttcacaaaaag
acctctggaaaagaagacccctcatcagtaagtaaacaatcagaaaagacacctggttct
gaagaagtaactgacaataaaaaatctcctagtgctgacaatatggatgctacagaagta
aacacatcaacacttcctgaagagtcaaaaaaagaagaatcaatgaaaggtcttgcaaac
aaggagtcaacgaaggatgtctcaaaagaagccacgaaagatctcccagacaaagaatca
tcaaaagaacttgcaagagatgagtcagtgaaacatctctcagaagaagagaaatcaatt
gaaaagtcaacgaaagatgcctcagagaaagcaatgaaagagtcaccaaaagagtcaata
aaagatctttcaaaaggtgaagcagcaaaagaagagtcaattgaagatctctcgaaagaa
gagacatccgagaggcaatccaagaaagatctcacagaaaaaggtcagcaatctcccaaa
gactccaatgaagaccatgaaaaaccagatccaactgcttccacgccaatggaaactgaa
ccattccagtcatctaaaaaagaaaaatcctcttcccgtgaggtaatcaaaccacattct
ggcacagaaaagtcagagaacgctgaaaaaacaaaacctcaaaacagctctggagacacc
atcacagaaaaagagccaactgccattgtctcaaaaagtgaaggtgacaaagtctcaacc
aatggaaaaagtgagtccattgcctctaaaccttcagaagattcagatggccctcaagat
aaagcgcaaaagcagtctgcctcccctaagtttgcatcaagtgatcttgaaaaatcatct
gtttctgattcaacgaataagccaagcacaccaaaaaccacagagaaaggagacagtgag
gaaaaatgtgatacagctgaaactgataaaaatgagaatctggaaacgtcaaaagacaag
gatgaaaagggtgaagctgcaaacagctctgaagaatctggtgcgaaaaaatcgaaagaa
gttaaagctacagaacaacccagtaaatccaagaggtcgaagaaacatgaaaaggaaccc
gattccgaggaagggaacaaagagaagccaatggaagttgattcagagatcagtaaagct
gataaaattcagtctgagactacaacaacaagtaaaaaggaaactgatgttcctctggat
caaaacaccacctcaagcaaacaatctaagcaagacgcaacttctgaagaacgcaaagct
tccggggatgttcgagaaaaaagcaacgctgctgtgaaaagcagtaagagaccaggccgg
cctccaaagaaagctcaggagagtcaggatgaggagaaaacaggcgaagaacaagaagaa
aagccacggcaggaaggaattcgcatgaagatcaaaattccagctcacgggcggaaggca
gaacttcagagagaagagccgaggggagattcagagtctgagatgactgacagcagatgc
ttgaggagatctccgagaatctgcagacccactgctaaagctgtggagatccaggacagg
agggcagaacggaagcaggccactccggtgtcggagaaagaaaaggatgacaaggaagac
aaagaggaggaagattctgtacagaagagaccgaggaaagctgagccagatggccaaaca
aaaccaaagcaggtggggagacgtcgaaaacgacaaccatggtctcgcatgagacgtaaa
aagaaatgttctgacgacgatgatgatgaggaggaggagagcgagagtgaggaagaggag
acggaggaggatgacagcgatgaagactacaaggtggagaagaccagaaaaagaaggaga
aaccgaaacagagagcggaacagctctgactcctctacctcttcatcagaaaatgatgaa
cccaatgacgacccctgcaaacactgtggccttcccaaccatcccgagctgatactcctg
tgtgattcctgtgacaacggctaccacactgcctgtctgcggcctccgctcatgatcatt
ccagatggggaatggttttgccccccatgccagcataagcaactttgcgacagactcgaa
gagcaactgcagaatttggatgccgtcctcaaaaagaaagaacgtgcagagcgaaggaaa
gagcgattggtgtatgttggcatcagtgtagaaaacatcatcacaccttccgtggaagtg
gaggaagaaaaggaagagctggtaaaagagaagaaagatgtaaagaaaagcaaaagttgg
ggacggagatcaaccagggcgaagaaatgcataagctacagatttgatgagtttgatgaa
gcgattgaagaggcaatcgaggaagacattaaagaggcagagggtggaggagctggccgg
gggaaggacatggcgaacatcacaggccacagagagaaggacatgtccaccattctacag
gaggacgggaaggagaacgggcggccgcggcgaaccagcgcagctcagaagaagaagcgg
cggcgtcttaacgatctagacagcgacagcactgtggatgaggatgagagcgaagacgag
ttccgtctcagtgacagttcagaggatgaggagtttgcggcctctgataatgcagagagc
gaagcggaagtcccgtcctatgaggacagtgacttcgggagcgacgttgaccgcccacgg
aggagacagccaccacgcaagagacgcaaacccaaaggatactctgatgaggaagagttg
gaaactgacgaagaggaggaagaggaggagatggcgacggaaggctctagtgaattcagc
gacagcgatctggacgtccgctgtcggcggtcctatcggagtcgtaagcaagaggtaaac
tactgtgaaagctcagattctgatggctcacaggccagcaccaacaaagacaaaaagaag
aaacgcagacgtctttccagctctgacagcgaagttagtttccaatcaggtgaatctgaa
gaagaagagcggaagcccaagaagataagagcagattcatctgaggaagaatccaggaaa
cgacgcagacgcctgtccctcaagcgccggagagagtcggaagacgacgatgatgatgac
gattcagacgaatccgaggaagaggagcggcccgtccggaagcgtgtgaaccgcatcgac
tctgacgacagcgagagcgaagaagaggtgaagaagagcccgtcagaaaaagaaaaagag
aagaaggaggagaaggagaaagagacagaggagaccgttgccaaagggcccagtccacta
gactacaatttggcggagcttcctccaactaacggacagagcccagtgaagggtttggag
ggtctaatcccacgacccgcggccggagttacgcctaaaaacggcaacgccccatcagct
gtatcaatagcgccgaatggcatggagattcccgcacaggacgaagacgaagatgacctt
ttgggcgtcacagacctcgtagactatgtatgcaacagtgaacagttataa
DBGET
integrated database retrieval system