Garra rufa (doctor fish): 141299515
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Entry
141299515 CDS
T11039
Symbol
gbe1a
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00500
Starch and sucrose metabolism
grf01100
Metabolic pathways
Module
grf_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
141299515 (gbe1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141299515 (gbe1a)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
141299515 (gbe1a)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141299515 (gbe1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
CBM_48
DUF5696
AMPK1_CBM
hDGE_amylase
Motif
Other DBs
NCBI-GeneID:
141299515
NCBI-ProteinID:
XP_073685982
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Position
23:complement(21388852..21597769)
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AA seq
689 aa
AA seq
DB search
MSDSNTDETLPNLNAFLQTDPYIRNYEGELRKRYKRFAERLAQLEEAEGTFDCFTLSYRS
FGIQRQPDSGLVLREWAPGAEAVLLTGDFNSWEKQSHPFTQKEYGKWELCLSPKVDKSPA
IKHLTKLKLVVLTKTGEYLFRISPWAKYVTKTLDSVTYDWTHWDPPQPYQFQHPRPPRPS
SLRIYEAHVGISSPEEKIASYKNFTRDVLPRIKDLGYNCVQLMAVMEHAYYASFGYQVTN
FFAASSRFGTPDDLKQLIDTAHSMGITVLLDVVHSHASSNTEDGLNYFDGTDSCFFHEGS
RGNHSLWGSRLFNYSSWEVVRFLLSNLRWWMEEYHFDGFRFDAVTSMLYHHHGIGMSFSG
NYNEYFGMHVDEDALIYLMLANHILHKLYPQCITVAEDVSGMPGLCRSIEEGGLGFDYRL
TMAVPDKWIQVLKEVRDEDWDLENIVHTLTNRRRGEASITYAESHDQALVGDKSLAFWLM
DKEMYTNMSALNAMTPVIDRGIQLHKLIRLLTHSLGGEGYLNFMGNEFGHPEWLDFPRKG
NDESYYYARRQFNLVDIEHLRYRQLYAFDRDMNLTEDKYGWLAAGQAAVTTLNQADKVIV
FERANLLFIFNFHPCNSYNDYRVAVEHAGKYKIKLNSDELQYGGHGRLVQDTEFFTEPAP
FSGQAQSFLIYIPCRTALILANEDIDFRH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattcaaacactgatgagactttaccaaacctcaacgcgtttctacaaacggat
ccgtatatacgaaactatgagggagagctgcgcaaaagatacaagcggtttgctgagcgt
ctggcacagctggaggaggcggaagggacctttgattgcttcacactgagctaccggtcc
tttggaattcagcggcaacccgacagcggtctagtccttagggaatgggcgccgggagcg
gaggccgtcctcctgactggggatttcaattcctgggaaaaacagtctcatcctttcacg
cagaaagaatatgggaaatgggaactatgcctctctccaaaagtggacaaatctcctgcc
atcaagcacctgaccaaactcaagctggtggtcctgactaaaacaggtgaatatctgttt
aggatctctccctgggccaaatatgtcacaaaaacactggattccgtcacatacgactgg
actcattgggaccctccgcaaccataccagttccagcaccccagacccccacggcccagc
agtcttcgtatctatgaggcccatgtgggcatcagttcgcctgaggaaaagattgcctcg
tacaaaaacttcaccagagatgtgcttcctcgcattaaggatcttggatacaactgtgtt
cagctcatggcagtcatggaacatgcctactatgcaagcttcggctatcaagtcactaac
ttctttgcagcttccagccgctttggcactcctgatgatctgaagcaactgattgatacc
gcacactccatgggcatcacggttcttctggacgtggtccacagtcacgcctccagcaac
acagaagacgggctgaactacttcgacgggacagactcctgcttctttcacgaaggctcc
agaggaaaccactcgctctggggcagccgactcttcaattactccagctgggaggtggtt
cggttcctgctctccaacctgcgctggtggatggaggagtatcactttgacggcttcagg
tttgatgctgtgacttcaatgctgtaccaccaccatggcatcggcatgtcgttttcgggg
aactacaatgagtacttcgggatgcatgtggatgaagacgcacttatatatctaatgctg
gccaatcacattctccacaagctctacccacaatgcatcactgtagcagaggatgtatca
gggatgccaggcctgtgcaggtccattgaagagggaggactgggctttgattatcgtctg
accatggccgtgccagacaaatggatccaggtcctgaaggaagttcgggatgaagactgg
gatttagagaacattgttcacaccctgaccaacagaaggagaggtgaagcatctatcacc
tatgctgagagccatgaccaggcgttggttggggacaagtcgctggcgttttggctgatg
gacaaggagatgtacaccaacatgagcgctcttaatgcaatgacgcctgttatagaccgt
ggcatccagctgcataaactcatccgtctcctcactcacagtctaggaggggagggctac
ctcaacttcatgggtaacgagttcggccatccggaatggcttgactttcccaggaaagga
aacgacgagagctactattatgctcgtcgccagttcaaccttgtggacattgagcatctg
cgataccgacaactatacgctttcgaccgtgacatgaatcttacagaagacaaatacggc
tggctggctgccggtcaggcagcagtcacgactctgaatcaagccgacaaggtgatcgtg
tttgagcgcgcaaacctgctgttcatattcaacttccatccttgcaacagctacaacgac
tacagggtggcagtggagcatgctgggaaatataagatcaaattgaactcggacgagctt
cagtacgggggtcacgggaggcttgtgcaggacactgagttcttcacagagcctgcgcct
ttcagtggtcaagcacaatcatttctgatctacattccttgcagaaccgctctgatcctg
gcaaatgaggacattgatttcagacattga
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