Garra rufa (doctor fish): 141299631
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Entry
141299631 CDS
T11039
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141299631 (rfx3)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Other basic domains
RF-X
141299631 (rfx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
ThermoDBP-RP_arch
Motif
Other DBs
NCBI-GeneID:
141299631
NCBI-ProteinID:
XP_073686103
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Position
23:1522692..1561984
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AA seq
768 aa
AA seq
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MQTPEAGADSTSNVPLQTSVPVQPAVSAQQVASQVPVQQQVSPYAQTVQQVQHVYQAQVQ
YVQEENNGVYTNGTIRTYSYSEPQLYNQNSSGNYFDTQGSSAQVSTVVSTHSMANNGNGN
GALAMGLSGGQIISSSGAYLIGGNSMDGSAPHTAAQTTRASPATIEMAIETLQKSEGLSS
QRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFM
GLRTRRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKMDGV
SGENFSAGGQHTPNAAEQTFIAQSQHHQQFLDGSRALPEFVELDLGEPVEGVGPEDVKAL
QTLYREHCEAILDVVVNLQFNLIENLWQTFWRYSPSSSVEGVTITENSGMSEIEGRLPRT
RLILLCRNEGVLKWMNTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNA
MSSIPQRMIQTKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFAN
VQEQASWVCQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQILKPYEDKPTLPKA
ARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIGV
MGEFQDLNTMSPANLDKDEVSEMDSDLDDDMEDSDEPLAKREKAETEVIQVLQVGAMEDG
SSAVVGVVQPSMLSSLPPTTGNHTEHILSSGTSTIRHCGSVGNTYASV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccccagaggcaggcgctgactccacgtccaacgtgcccctccagaccagcgtg
cctgtgcagcctgcggtcagtgcccagcaggtggcgtctcaggtgcccgtccagcaacag
gtgagcccatatgcgcagactgttcaacaggtccagcatgtgtatcaagcacaggtgcag
tacgttcaggaggaaaacaacggcgtttacaccaatggaaccatacggacgtattcatac
tcagaaccgcaactgtacaaccagaacagcagcgggaactacttcgatacgcagggcagc
tcggctcaggtgagcacggtggtcagcactcacagtatggccaacaacggcaacgggaac
ggagctctggcaatggggctgtcgggaggccagatcatcagcagctcaggagcgtatctg
attggaggaaactccatggacggctccgcccctcacaccgcggctcagaccaccagagcc
tcccccgccacgattgaaatggcgattgagacgctccaaaagtctgaaggtttgtccagt
cagagaagttcgctgctcaacagccatctacaatggttactggataattacgagacggcg
gagggagtgagtctgccccgttccaccctctacaatcactacctgcgccactgtcaggag
cagaagctggaccctgtcaatgctgcgtctttcgggaagctcatccgctccatcttcatg
gggctgcgcactcgccgcttgggaacccgagggaactctaagtatcactattacgggatt
cgcgtgaagccggactctcctctgaaccggttgcaggaggacatgcagtacatggcgttg
agacagcagcccgtccaacagaagcagagattcaagccagtacagaagatggacggcgtt
tcaggcgagaacttctcggccggtgggcagcacacgcccaatgctgcagagcagacgttc
atcgctcaaagccaacaccatcagcagttcctggatggatccagagctcttccggagttt
gttgaacttgatctcggagagccggtggaaggcgtcggcccagaggatgtcaaagccctt
cagacgctctacagagaacattgcgaggccattttggacgtggtggtgaaccttcagttc
aatctaatcgagaacttgtggcagactttctggcgctactctccatccagctccgtagag
ggcgtcaccatcacagaaaacagtggtatgagcgagatcgagggccgcttgccgcggacc
agactgattctcctctgccgaaacgagggagtgctcaagtggatgaacacctgtgatcac
ctgatgtatcaggccctcgtggagatcctcatccctgatgttctgagacccattcctagt
gccttgactcaagccatccgtaattttgccaaaagccttgagggctggctcaccaacgcc
atgagcagcattccccagaggatgatccagaccaaggtttccgctgttagtgcctttgct
cagaccctccgcagatacacgtctctgaatcatctggcgcaggcggcccgcgcggtcctg
cagaacacctcccagatcaaccagatgctcagcgatctcaaccgtgttgactttgccaat
gtgcaggaacaggcctcgtgggtgtgccagtgtgaagagggcgtagttcaacgccttgag
caggatttcaaggccacccttcagcagcagagctccttggaacagtgggccgcttggctg
gacaacgtggtcactcaaatactcaagccgtacgaggataaacccaccctccccaaagct
gcacgccagttcctgctcaagtggtccttctacagctctatggtcatcagagatctgacc
cttcgcagcgcggcgagtttcggctctttccacttgatccgactgctgtatgacgagtac
atgttctatctggtggaacaccgtgtggcacaagcgacgggcgagacgcccatcggagtt
atgggagagtttcaggacctgaataccatgtcacctgccaacctcgacaaagatgaggtg
agcgagatggacagcgatttggacgatgatatggaggattccgacgagcctctggccaag
cgtgagaaagcggagacggaggtcatccaggtgctgcaggtgggagccatggaggacggc
agcagcgcggtggtgggcgtcgttcaacccagcatgctcagctctttgcccccgaccacc
ggcaatcacaccgagcacatcctcagctccggaaccagcaccatccgccactgcggcagc
gtgggaaacacatacgcctcggtctga
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