Garra rufa (doctor fish): 141300027
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Entry
141300027 CDS
T11039
Name
(RefSeq) myosin-binding protein C, fast-type-like isoform X1
KO
K12558
myosin-binding protein C, fast-type
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141300027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141300027
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141300027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
V-set
FN3_DSCAM-DSCAML_C
C1-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
141300027
NCBI-ProteinID:
XP_073686428
LinkDB
All DBs
Position
24:35526733..35566514
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AA seq
1108 aa
AA seq
DB search
MPEPTEEVKPEEAPEEDERQELTGLFVEKPESVVAIAGKDVTFVVKVDSTNLTRKPVMKW
LKGKWMDLGSKAGKHIQIKETYDRNTKIYTYEMKIVKVVPGDAGGYRCEVSAKDKCDSCT
FEVTVEAAEQEESVDILSTFKRADAGEDEGDLDFSALLKAAKKKKKPEPEVEIDVWELLK
SAHPSEYEKIAFQYGITDLRGMLKRLKKMKVVEPKASEAFLRRLESAYSVNKGKKIVLSV
EVADPNAEVKWLKNGQEIKPSTKYIMEADGNIRTLTINKCNLADDAAYECVVGTDKCFTE
VFVKEPPITITKLLDDYQVMVGERVEFEIEVSEEGAHVIWMFEDQELSRDDKSSKYRFKK
DGKRHWLIIQEATLEDNGMYFVHTNGGQSKGELIVEEKELEVLQSIADLTVKSAEQAMFK
CEVSDEKVTGKWFKDGVEVLPSDRIKISHIGRIHRLTIDDVKPEDAGDYKFVPDGYALSI
SAKLNFLEIKIDYVPRQDPPKIHLDVAGNMVSQNTIIVVAGNKLRLDVEITGEPAPTVCW
MRGDKQVTDAEGRVRVENRKDLSCFVIEGAEREDEGNYTITVTNPAGEDKANLFIKIVDV
PDPPENVKCTGVGEDCATIIWEPPKFDGGAPLKGYLMERKKKGSSRWTKLNFDVYESTTY
EAKRMIEGILYEMRVFSVNGIGLSAPSLNSKPFMPIAPTSEPTKLIVDDVTDTTCSLKWL
APERIGAGGLDGYMIEFCKEGETEWHPANTDIIERQSYTVRNLPTGEKVNFRVVAVNIAG
RSPPALLGQPVTVREIMEHPKIRLPRELRTKYIRRVGEKINLVIPFQGKPRPIATWLKDG
QPVDEKKVGVRNSNVDSILFIRSAERDHTGKYTLILKIENMEDSATIDIRIVDKPGPPSH
VQVTDVWGFNAALEWKPPKDDGNCEITGYTIQKADKKTKEWFTVYEHNRRTNCTISDLVM
GNEYMFRIYSENLCGLSEDPCMSKNTAVIAKTDLTLKQAPFKEKDMTCAPKFTAPLVDRS
VTVGYSMAISCAVRGLPKPKIIWMKNKMIIGDDPKFLMQNNQGVLTLNIRKPSAFDSGKY
TCKAVNDLGEDEVECKLEIRATPIEKKD
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcccacagaagaggtgaagccagaggaagctccagaggaggatgaacgacaa
gagctgacaggactttttgtggagaagccagaaagtgtagtggccatcgcaggtaaagat
gtaacatttgtggttaaggtggactccaccaacctcacacgtaaacccgtcatgaagtgg
ttgaaggggaagtggatggacctcggcagcaaagcaggaaaacacatccagataaaagag
acctatgacagaaacactaagatctacacgtacgagatgaagattgtcaaggtggtccca
ggagacgcaggtggatacaggtgtgaagtgtctgctaaagacaaatgtgacagctgcacc
tttgaggtcactgtggaggctgctgaacaagaggagtcagtagatattttgtctaccttc
aaaagagcagatgctggggaggatgagggtgatctggactttagtgctcttctcaaagcc
gctaaaaaaaaaaagaaaccagagcctgaggtggagatcgacgtttgggagcttctgaag
agcgctcatcccagcgagtatgagaagattgcgtttcagtacggcatcactgacctgcgt
ggcatgttgaaacgactcaagaagatgaaggttgtggagcccaaagccagcgaggcgttc
ctgagacgacttgagtcggcatactccgtaaacaagggaaagaagatcgtcctgtctgtg
gaggtggccgaccctaacgctgaggtcaaatggctcaaaaacggccaagagatcaaacct
tctaccaaatatataatggaggccgatggaaacattcgaaccctcacgattaacaaatgt
aatctggcagatgatgctgcatatgaatgtgtggtcgggactgataaatgcttcacggaa
gtctttgttaaagaaccaccaataaccatcactaaactgctggatgactaccaggtcatg
gttggagaaagagtggagtttgagattgaagtgtctgaagagggagcacacgtaatttgg
atgtttgaggatcaggagttgtctcgagatgacaaaagttcaaagtatcgttttaaaaag
gacgggaaacgccactggcttattattcaagaggcgacactagaggacaatgggatgtac
tttgttcacaccaatggaggccaatcgaagggagagctcatcgttgaagagaaggaactg
gaggtgctgcaaagtattgcagatcttacagtcaaatcagcagagcaagcaatgttcaag
tgtgaggtgtctgacgagaaagtcacagggaaatggtttaaggatggcgtggaagttctg
cccagtgaccgtatcaagatttcccatatcggcaggattcatcgtttgactattgatgac
gtcaagccagaggatgctggagattacaagtttgtcccagacggttatgcactctcaatc
tctgctaaactcaacttcctggaaatcaagatcgactacgttcccagacaagatcctcct
aagatccatttggatgttgccggtaacatggtttctcagaacaccatcattgttgttgct
ggtaacaaactgcgtctggatgtggagatcactggagaacctgctcccactgtttgctgg
atgaggggagacaagcaagtgacagatgcagagggacgtgtgcgtgtggaaaacaggaaa
gacctcagctgtttcgtcattgaaggagcagaacgagaagatgagggcaactacacaatc
actgtcaccaaccccgcaggagaggacaaagccaacctattcatcaaaatcgtagacgtt
cctgatcctcccgagaacgtgaagtgtactggagtaggagaagactgtgccactattatc
tgggagcctccgaagtttgatggaggagcacctttaaaaggctatctgatggagagaaag
aagaaaggatcatccagatggactaaacttaactttgacgtctatgagagcacgacatac
gaggccaagcgcatgattgaaggcattctgtatgagatgagagttttctcagtcaatgga
atcggactgtcagctcccagcctcaactctaaaccattcatgccaatcgcccccaccagc
gagcccacaaagttgattgttgatgatgtgacggacaccacgtgctcactgaagtggttg
gctcctgagaggatcggagctggagggttggatggatacatgattgaattctgcaaggaa
ggagaaacggagtggcatcctgctaacacggatatcattgagcgtcagagttacacggtg
agaaaccttcccactggcgagaaggtgaatttccgtgtggttgcagtgaacatagcgggc
cgcagtcctcctgcattacttgggcaaccggtcaccgtcagagagatcatggagcatcct
aagatccgtctgcctcgtgaactcagaaccaagtacatcaggagagtcggagagaaaatc
aaccttgtcatccccttccagggcaaacctcgtcctatcgctacatggctgaaggacggc
cagcctgtggatgaaaagaaagtaggtgtcaggaactcgaatgtcgactccatccttttc
attcgttctgctgagagagaccacactgggaaatacacacttatcttgaaaattgaaaac
atggaggactcagccaccatagacatccgaattgtagataaacccggccctccaagtcat
gtgcaagtgactgatgtctggggtttcaacgcagcgttggagtggaaaccacccaaagat
gacggcaactgtgagatcactgggtacacaatccagaaagcagacaagaaaaccaaggag
tggtttacggtgtatgagcacaatcgccgcactaactgcaccatctctgaccttgtcatg
ggaaacgagtacatgttccgcatctacagcgagaacctctgcggactcagtgaagatccc
tgcatgagcaagaacaccgctgtcattgccaagaccgatttgacactgaaacaagctccc
ttcaaggagaaggacatgacctgtgctcctaagttcaccgcacccctcgtcgatcgatct
gtgactgtcggctacagcatggccatcagctgcgccgtcagaggcttgccaaaaccaaag
atcatctggatgaaaaacaagatgataataggtgacgatccaaagttcctgatgcagaat
aaccagggggttttgactcttaacatccgcaaacccagcgccttcgacagcggaaagtac
acttgcaaggctgtaaatgacctcggagaagatgaggtggagtgcaaattggaaatcaga
gctacgccaatagagaagaaggactag
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