KEGG   Garra rufa (doctor fish): 141300058
Entry
141300058         CDS       T11039                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04110  Cell cycle
grf04114  Oocyte meiosis
grf04120  Ubiquitin mediated proteolysis
grf04141  Protein processing in endoplasmic reticulum
grf04310  Wnt signaling pathway
grf04340  Hedgehog signaling pathway
grf04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    141300058 (cul1b)
   04120 Ubiquitin mediated proteolysis
    141300058 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    141300058 (cul1b)
   04340 Hedgehog signaling pathway
    141300058 (cul1b)
   04350 TGF-beta signaling pathway
    141300058 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    141300058 (cul1b)
   04114 Oocyte meiosis
    141300058 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141300058 (cul1b)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     141300058 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 141300058
NCBI-ProteinID: XP_073686458
LinkDB
Position
24:complement(17935987..17963763)
AA seq 777 aa
MSSNRGQNTHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKARYMELYTHVYNYCTSVHQSN
QARGAGIPPSKPSKKTPTPGGAQFVGLELYKRLKEFLRSYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFVKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQFNTENIYSVQQLADSTQIKIDILVQVLQILLKSKLLVLEDENANID
EMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2334 nt   +upstreamnt  +downstreamnt
atgtcatccaacaggggccagaacacccacgggctcaaacagattgggctggaccagatc
tgggatgacctgagagcaggaatacagcaggtctatacacgccagagcatggctaaggca
cgctacatggaactctatacacatgtgtataactactgtaccagtgtgcaccagtccaac
caggccaggggtgctggcatccccccttctaaaccctccaagaaaacacccacacctggc
ggggcacagtttgtcggattggaactctacaaaagactgaaagagtttctgaggagctac
ctgacgaaccttctcaaggatggagaggacctgatggatgagagcgttttgaagttctac
acgcagcagtgggaggactatcgcttctccagtaaagtgttaaatgggatctgtgcttac
ctcaatagacactgggtgcgccgagagtgtgatgagggacggaaaggaatttatgaaatc
tactcgcttgctttggtcacttggagagagtgtttattcagacctctaaacaagcaggtg
acaaatgctgtgttaaaactcattgagaaggagagaaatggtgagactattaacaccaga
ctcatcagtggagtggtgcagtcctacgttgagttgggtttgaatgaggatgatgcgttt
gtgaaggggccgacattatcagtttacaaggagtactttgagacgcagtttttggctgac
acagagcgcttctacacacgggaaagcacagagttcctccagcaaaaccctgttaccgaa
tacatgaaaaaggcagaggcacggttgcttgaggagcagcggcgggtacaggtttatctc
cacgagagcacacaagacgagctggctcgcaagtgtgagcaggtcctcatcgagaaacac
ctggagatcttccacacagagttccagaaccttctagacgctgataagaatgaagatctc
ggtcggatgtacaaccttgtttcccggatcacggacggattgggcgagctcaaaaaactc
ttggagtcccacattcataatcaagggctggctgccattgagaagtgtggagattcagca
ctcaatgatcccaaaatgtatgtgcaaaccatcttggacgttcacaagaaatacaatgcc
ctcgtcatgtctgcgttcaataacgacgctgggtttgtggcagcactcgataaggcctgt
ggaagattcattaataataatgcggtaacgaggatggcacagtcctccagcaaatctcct
gagcttctcgccagatactgtgactccttactgaagaagagttcaaagaatccagaggag
gctgagctggaagatactctcaaccaagtgatggtggttttcaagtatattgaggataaa
gacgtgttccagaagttctatgccaagatgctggccaaaagactggtgcaccagaacagt
gccagcgacgacgccgaggccagcatgatctccaaactgaagcaagcatgtggtttcgag
tacacctccaaactccagcgcatgttccaggacatcggtgtcagcaaagacttgaatgag
caattcaaaaagcacctttccaactccgagcctttggatttggatttcagtatccaggtt
ctgagttctggctcgtggccgttccaacagtcttgcacgttcgctttaccatctgagttg
gagcggagttaccaaagatttacagctttttatggaagtcgacacagcgggcgcaagttg
acatggctgtaccacctatctaaaggggagctggtcaccaactgcttcaagaacagatac
actctacaggcctccaccttccagatggccatcctgctccagttcaacacagagaatatc
tacagcgtccagcaactggccgacagcacacagatcaaaatagatattttggttcaggtc
ttgcaaatcctgttgaaatcaaagttgctggtgttggaggatgagaatgcaaacatagat
gaaatggacttcaagcctgatacattaatcaaacttttcttgggctataagaataagaag
ttaagggtgaatatcaatgtgccaatgaagacagagcagaaacaagagcaggagacgaca
cacaagaacatcgaggaagacaggaagctcctcatacaggcagctatcgtgagaatcatg
aagatgagaaaagttttaaagcaccagcagcttttggcagaagtgctgaaccaactctcc
tcacgattcaaacctcgtgttcctgtcatcaagaaatgcattgacattttgatagagaag
gaatacctggaacgtgtggatggggaaaaagacacatacagttacttggcataa

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