Garra rufa (doctor fish): 141300058
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Entry
141300058 CDS
T11039
Symbol
cul1b
Name
(RefSeq) cullin-1b
KO
K03347
cullin 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
grf04114
Oocyte meiosis
grf04120
Ubiquitin mediated proteolysis
grf04141
Protein processing in endoplasmic reticulum
grf04310
Wnt signaling pathway
grf04340
Hedgehog signaling pathway
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141300058 (cul1b)
04120 Ubiquitin mediated proteolysis
141300058 (cul1b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141300058 (cul1b)
04340 Hedgehog signaling pathway
141300058 (cul1b)
04350 TGF-beta signaling pathway
141300058 (cul1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141300058 (cul1b)
04114 Oocyte meiosis
141300058 (cul1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141300058 (cul1b)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
141300058 (cul1b)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
141300058
NCBI-ProteinID:
XP_073686458
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Position
24:complement(17935987..17963763)
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AA seq
777 aa
AA seq
DB search
MSSNRGQNTHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKARYMELYTHVYNYCTSVHQSN
QARGAGIPPSKPSKKTPTPGGAQFVGLELYKRLKEFLRSYLTNLLKDGEDLMDESVLKFY
TQQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQV
TNAVLKLIEKERNGETINTRLISGVVQSYVELGLNEDDAFVKGPTLSVYKEYFETQFLAD
TERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKH
LEIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSA
LNDPKMYVQTILDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSP
ELLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNS
ASDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQV
LSSGSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRY
TLQASTFQMAILLQFNTENIYSVQQLADSTQIKIDILVQVLQILLKSKLLVLEDENANID
EMDFKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIM
KMRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccaacaggggccagaacacccacgggctcaaacagattgggctggaccagatc
tgggatgacctgagagcaggaatacagcaggtctatacacgccagagcatggctaaggca
cgctacatggaactctatacacatgtgtataactactgtaccagtgtgcaccagtccaac
caggccaggggtgctggcatccccccttctaaaccctccaagaaaacacccacacctggc
ggggcacagtttgtcggattggaactctacaaaagactgaaagagtttctgaggagctac
ctgacgaaccttctcaaggatggagaggacctgatggatgagagcgttttgaagttctac
acgcagcagtgggaggactatcgcttctccagtaaagtgttaaatgggatctgtgcttac
ctcaatagacactgggtgcgccgagagtgtgatgagggacggaaaggaatttatgaaatc
tactcgcttgctttggtcacttggagagagtgtttattcagacctctaaacaagcaggtg
acaaatgctgtgttaaaactcattgagaaggagagaaatggtgagactattaacaccaga
ctcatcagtggagtggtgcagtcctacgttgagttgggtttgaatgaggatgatgcgttt
gtgaaggggccgacattatcagtttacaaggagtactttgagacgcagtttttggctgac
acagagcgcttctacacacgggaaagcacagagttcctccagcaaaaccctgttaccgaa
tacatgaaaaaggcagaggcacggttgcttgaggagcagcggcgggtacaggtttatctc
cacgagagcacacaagacgagctggctcgcaagtgtgagcaggtcctcatcgagaaacac
ctggagatcttccacacagagttccagaaccttctagacgctgataagaatgaagatctc
ggtcggatgtacaaccttgtttcccggatcacggacggattgggcgagctcaaaaaactc
ttggagtcccacattcataatcaagggctggctgccattgagaagtgtggagattcagca
ctcaatgatcccaaaatgtatgtgcaaaccatcttggacgttcacaagaaatacaatgcc
ctcgtcatgtctgcgttcaataacgacgctgggtttgtggcagcactcgataaggcctgt
ggaagattcattaataataatgcggtaacgaggatggcacagtcctccagcaaatctcct
gagcttctcgccagatactgtgactccttactgaagaagagttcaaagaatccagaggag
gctgagctggaagatactctcaaccaagtgatggtggttttcaagtatattgaggataaa
gacgtgttccagaagttctatgccaagatgctggccaaaagactggtgcaccagaacagt
gccagcgacgacgccgaggccagcatgatctccaaactgaagcaagcatgtggtttcgag
tacacctccaaactccagcgcatgttccaggacatcggtgtcagcaaagacttgaatgag
caattcaaaaagcacctttccaactccgagcctttggatttggatttcagtatccaggtt
ctgagttctggctcgtggccgttccaacagtcttgcacgttcgctttaccatctgagttg
gagcggagttaccaaagatttacagctttttatggaagtcgacacagcgggcgcaagttg
acatggctgtaccacctatctaaaggggagctggtcaccaactgcttcaagaacagatac
actctacaggcctccaccttccagatggccatcctgctccagttcaacacagagaatatc
tacagcgtccagcaactggccgacagcacacagatcaaaatagatattttggttcaggtc
ttgcaaatcctgttgaaatcaaagttgctggtgttggaggatgagaatgcaaacatagat
gaaatggacttcaagcctgatacattaatcaaacttttcttgggctataagaataagaag
ttaagggtgaatatcaatgtgccaatgaagacagagcagaaacaagagcaggagacgaca
cacaagaacatcgaggaagacaggaagctcctcatacaggcagctatcgtgagaatcatg
aagatgagaaaagttttaaagcaccagcagcttttggcagaagtgctgaaccaactctcc
tcacgattcaaacctcgtgttcctgtcatcaagaaatgcattgacattttgatagagaag
gaatacctggaacgtgtggatggggaaaaagacacatacagttacttggcataa
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