Garra rufa (doctor fish): 141300065
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Entry
141300065 CDS
T11039
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecule (CAM) interaction
grf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
141300065
04517 IgSF CAM signaling
141300065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141300065
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
NGL family
141300065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
LRRNT
Ig_2
VEGFR1-3_N_Ig-like
Ig_6
Motif
Other DBs
NCBI-GeneID:
141300065
NCBI-ProteinID:
XP_073686468
LinkDB
All DBs
Position
24:complement(35709427..35717340)
Genome browser
AA seq
724 aa
AA seq
DB search
MQAAMVTGFFSPSPLIWLVQLLLWPHLLGPRLAEASPACPAPCSCSNQASRVICTRKGLN
EVPQSISSNTRYLNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLIT
LELFDNRLPLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFI
SEAAFEGLLNLRFLNLGMCGLKDVPNLTPLVRLEELELSGNQLGVVRPGSFQGLVSLRKL
WLMHSRISVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCD
VLWLSWWLKETVPDNSTCCARCHAPPGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGAYKVRISVLHDGTLNFTNVTMQDTGPYTCMV
TNSAGNTTATAVLNVSASDPGSGYSYFTTVTVETVETGQDSHGSARQFINETLISFPGPT
AASASAGPTGSMLSSLSPRATRAPDRPFTVSITDVANLSGLEDVMKTTKIIIGCFVAITF
MAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGSAGGASGITGGSTVHTGAGSGG
GGGQSPRNHDPEIMTLPSVGQTDHLNHYYKAHHFNNNVLGLNMASGMLNNKPNLSSQNQA
STMKMGSSGDHSNPGSTSPPLPIPIPMAMTFHGTLKGLSHVPNVQTEPLLLSNGSKESVQ
ETQI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgctatggtaacaggctttttcagcccctcccccctcatctggttggtccaa
ttgctgttgtggccacacctcctcggacctagattggccgaagccagtcccgcctgtcct
gctccttgtagctgttccaatcaagccagtcgagtgatttgtaccagaaaaggcttaaat
gaagttccacagagtatctcgtccaatactcgatacctcaacctccaggagaactccata
caggtgatcaggtcagacaccttcaagcacctgaaccatctggaaattttacagttgtct
aagaaccagattcgtcagatagaagtgggagctttcaatggccttcccaatcttatcacc
ctggagctttttgacaacagactaccattggtaccatcacaggcgtttgagtacttgagc
aagctgcgtgaactctggctaaggaacaaccccatagagacactcccggcgtacgccttc
caccgcgtgccgtcgctgcgacggttagacctcggagagctccgcaaactcagtttcatc
tctgaggctgcgttcgaggggctgctgaatctacgtttcctgaatctggggatgtgcggg
cttaaggatgtacccaacttgacgcctcttgtgcggctagaggaactggaactgtcggga
aaccaactgggagtggtgcgtcctggatctttccaaggcctagtgtctctacgcaaactc
tggctcatgcactctcggatctccgtcattgagaggaatgccttcgatgacctcaagaac
ctggaggagctcaatctgtcccataactctctgcattcgttgccccacgatctcttcacc
cctctgcagcagttagagcgtgtccatctgaaccacaacccttgggtttgcaactgcgac
gttctatggttgagctggtggcttaaagaaactgttcctgataactccacttgttgtgca
cgttgccatgccccaccagggactaagggcaggtacattggtgacctcgaccagcgagac
ttcacctgctacgcacctgtgattgtggagccacccacagacctaaacgtgaccgaggga
atggcagcggagctgaaatgccgcaccgggacgtccatgacttctgttaactggttgacc
cccaatggaaccttgatgacccacggagcatacaaagtccggatctcggtcctgcatgac
ggaactctgaatttcaccaacgtgaccatgcaagatacaggaccctacacatgtatggtc
accaactccgctggcaacaccacagcaactgctgtgcttaatgtctccgcatctgaccca
ggcagtggctacagctacttcacgactgtcaccgttgaaaccgtcgagaccgggcaagat
agccacggctcggcacggcagttcatcaacgagacgttaattagttttccagggccaacg
gctgcatccgcctcagcaggtcccactggttcaatgctatcctctttgtcaccacgagct
acgcgtgcaccagatcgcccgttcacggtctccatcacggacgtcgccaatctgtcgggt
cttgaggacgtaatgaagacgaccaagatcatcatcggctgcttcgtggccatcaccttc
atggcggccgtgatgctggttgtcttctacaagcttcgcaagcagcaccaactgcacaaa
caccacgggccggcacgtgcaatcgagatcatcaacgtcgaagacgagatcggatctgcc
ggcggagctagcggcatcacgggagggagcaccgtccacaccggagcaggatctggcgga
ggcggcggacagagtccgaggaatcacgaccctgagatcatgaccctcccgagcgttggg
caaacggaccacctgaatcactactacaaagcgcaccactttaacaacaacgtgcttggc
ttgaacatggcctctggaatgctcaacaacaaacccaacctttcgtcgcaaaatcaggct
tcgaccatgaaaatggggagttccggcgaccactccaaccctggctcgacctcccctccc
ctgccaattcccatcccaatggcgatgactttccacgggactctgaaaggccttagtcac
gttcccaacgtgcagactgagccgctgttgctatcaaatggctccaaggagagcgttcag
gagacccagatctga
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