Garra rufa (doctor fish): 141300073
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Entry
141300073 CDS
T11039
Symbol
smyhc1
Name
(RefSeq) slow myosin heavy chain 1
KO
K17751
myosin heavy chain 6/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04260
Cardiac muscle contraction
grf04261
Adrenergic signaling in cardiomyocytes
grf04814
Motor proteins
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141300073 (smyhc1)
04820 Cytoskeleton in muscle cells
141300073 (smyhc1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
141300073 (smyhc1)
04261 Adrenergic signaling in cardiomyocytes
141300073 (smyhc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141300073 (smyhc1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
141300073 (smyhc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myosin_tail_1
Myosin_N
CCDC39
FKBP15
HALZ
PUMA_CC
NPHP3_N
HET-s_218-289
Filament
DUF1664
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
141300073
NCBI-ProteinID:
XP_073686479
LinkDB
All DBs
Position
24:complement(37883452..37892995)
Genome browser
AA seq
1934 aa
AA seq
DB search
MSDAVMAEFGSAAPFLRKSDKERLEAQTRPFDMKKECFVPDPEVEYVKASITSRDGDKVT
VETEFKKTVTVKDVDVHPQNPPKFDKIEDMAMFTFLHEPAVLYNLKERYAAWMIYTYSGL
FCVTVNPYKWLPVYDSSVVKAYRGKKRTEAPPHIFSISDNAYQYMLSDRENQSVLITGES
GAGKTVNTKRVIQYFASIAAVSGKKDAASEKKGTLEDQIIQANPALEAFGNAKTIRNDNS
SRFGKFIRIHFGVSGKLASADIETYLLEKSRVTYQLKAERDYHIFYQILSQRKPELLEML
LITNNPYDYAYISQGETQVASIDDAEELCATDEAFDVLGFTTDEKSGIYKMTGAIMHYGN
MKFKQKQREEQAEADGTEDADKVAYLMGLNSADLIKGLCHPRVKVGNEWVTKGQSVQQVY
YSIGALAKSVYEKMFLWMVVRINQSLDTKQPRQYFIGVLDIAGFEIFDFNTFEQLCINFT
NEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIMSILEEECMFP
KATDQTFKAKLYDNHLGKNPTFQKPRIVKGRPEAHFSLVHYAGTVDYNISNWLVKNKDPL
NETVVGLFQKSTVKLLSFLFAGYAGADSCGGKGGGKKKGSSFQTVSALHRENLNKLMTNL
RSTHPHFVRCLIPNETKTPGAMENPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFKQRY
RILNPSAIPEGQFIDNKKAAEKLLGSLDIDHTQYKLGHTKVFFKAGLLGTLEEMRDDRLA
LIITGIQARARGILSRIEFQKIVERRDSLLVIQWNVRAFMGVKNWPWMKLYFKIKPLLKS
AETEKEMANMKEEFTKLKEAYAKSEARKKELEEKMVSLLQEKNDLQLAVQSEQDNLTDAE
ERCEGLIKSKIQLEAKVKELTERLEDEEEMNAELVAKKRKLEDECSELKKDIDDLELTLA
KVEKEKHATENKVKNLTEEMSALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDKVNTLTK
AKAKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLTQESIMDLENDKQQMEEKLKK
KDFEIGQLNSKIEDEQALGAQLQKKLKELQARIEELEEELEAERAARAKVEKQRADLSRE
LEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQNEATSATLRKKHADSVAD
LGEQIDNLQRVKQKLEKEKSELKLELDDVVSNMEQIVKSKSNLEKMCRTLEDQMSEYRAK
AEEGQRTINDFTMQKAKLQTENGELSRQLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEE
VKAKNALAHAVQSARHDSDLLREQFEEEQEAKAELQRSLSKANSEVAQWRTKYETDAIQR
TEELEDAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAAAAAL
DKKQRNFDKVLAEWKQKYEESQTELESAQKESRSLSTELFKLKNSYEEVLDHLETMKREN
KNLQEEISDLTEQLGESGKSIHELEKIRKQLEQEKAEIQTALEEAEGSLEHEEGKILRAQ
LEFNQVKADIERKLTEKDEEMEQSKRNQQRVVDTLQSSLEAETRSRNEALRVKKKMEGDL
NEMEIQLSQANRQASEAQKQLKGLHGHLKDAQMQLDDALRGNDDLKENIAIVDRRNNLLQ
AELDELRSLVEQTERGRKLAEQELLDVSERVQLLHSQNTSLLNQKKKLEGDNSQLQTEVE
EAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQ
IAMKGGKKQVQKLEARVRELENEVELEQRKASDSVKGIRKYERRIKELTYQTEEDRKNLA
RLQDLVDKLQLKVKSYKRAAEEAEEQANSNLGKFRKIQHELDEAEERADIAESQVNKLRA
KSRDSGSKKGHDEE
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctgtcatggcagagtttgggtcggctgctcccttcctgcgaaagtcagac
aaggagcgtctggaggcccaaactcggccctttgacatgaagaaggaatgctttgtccct
gatcctgaggttgagtatgtcaaagcctccatcaccagtagagacggtgacaaagtcact
gttgagactgaatttaaaaagacggtaaccgtgaaggatgttgacgttcaccctcagaac
ccgccaaagttcgataaaattgaggacatggcgatgttcaccttcctgcacgagcccgct
gtgctgtataacctcaaagagcgttacgcagcctggatgatctacacctattcagggctg
ttctgtgtcactgtcaacccctacaagtggctgccagtatatgattcctctgtggtcaaa
gcctacagaggaaagaagaggactgaagctcctcctcacatcttctccatctctgataac
gcataccagtacatgctttcagacagagagaaccagtctgtcctgatcactggagaatcc
ggtgctggaaagactgtgaacaccaaaagagtcattcagtactttgccagcattgctgct
gtgtctgggaaaaaggatgcagcttctgagaagaagggtactctggaggatcaaatcatc
caagctaaccctgccctggaggcctttggcaatgccaagaccatcagaaatgacaactct
tcccgattcggtaaatttatccgaattcactttggtgtaagtggaaaattggcttctgca
gatattgagacttatctgctggagaagtctcgtgtcacttatcagctcaaggctgagaga
gactaccacatcttctaccagatcctctcccagagaaaaccagaactgctagagatgctg
ctcattaccaacaacccctatgactatgcctacatctcccaaggagagacacaagtggca
tcaattgatgatgctgaagagttgtgtgctactgacgaagcatttgatgtgctgggcttc
actacagatgaaaagtcaggtatctacaagatgactggtgccatcatgcactacggcaac
atgaagttcaagcagaagcagagggaggaacaggcagaggctgatggaactgaagatgct
gacaaagttgcatatctgatgggcctgaactctgctgatctcatcaagggtttgtgccac
ccgagagttaaagtaggaaatgagtgggtcaccaagggacagagtgtccaacaggtgtac
tactctattggtgctctggcaaagtcagtgtacgagaagatgttcttgtggatggttgtg
agaatcaaccaatctctggacaccaaacagcctcgccagtacttcattggtgtgctggac
attgctgggtttgagatctttgatttcaacacctttgagcagctgtgcatcaacttcact
aatgagaagttgcagcagttcttcaaccaccacatgtttgtgctggagcaagaggaatac
aagaaggagggtatcgaatgggagttcattgactttggcatggacttagcagcttgtatt
gagctaattgagaagcctatgggtatcatgtccatccttgaagaggagtgcatgttccct
aaagccactgatcaaacattcaaagctaagctttatgacaaccacttgggaaagaatcct
actttccagaagcccaggattgtcaagggtagaccagaggcccacttctccctggttcac
tacgctggcactgtggactacaacatttcaaactggctggtgaagaacaaggaccctctt
aacgagactgtggttggactcttccaaaagtctactgtgaagcttctgtcattcctgttt
gctggatatgctggggctgactcatgtggaggtaaaggaggtggaaaaaagaagggttct
tctttccagactgtgtctgccctccacagggagaacttgaacaagctgatgaccaacttg
aggtcaactcaccctcactttgtgcgttgcctgattcccaatgagactaagactcctggg
gcgatggaaaatcctctggtcatgcaccagctgcgctgtaacggtgtgctggaaggtatc
agaatctgcagaaagggattccccaacaggatcctttatggagacttcaagcagagatac
cgtattttgaacccatctgcaatccccgagggtcagttcattgacaacaagaaagctgct
gagaaactgctgggctcactggacattgaccacacccagtacaagttgggacatactaag
gtgttcttcaaggctggtctcctgggtactcttgaagagatgagagatgaccgtcttgct
ctgatcattactgggattcaagcaagggctcgcggtattctctcaagaattgagttccag
aagattgttgagcgcagagattctctgttggtgatccagtggaacgtacgtgccttcatg
ggtgtcaagaattggccctggatgaagctctacttcaagattaagcctctgctgaaatct
gctgagactgagaaagaaatggccaacatgaaggaagaattcaccaagctgaaggaggct
tacgccaaatctgaagcccgcaaaaaggagcttgaggaaaagatggtttctcttctccaa
gagaagaatgacctccagcttgctgtgcagtctgagcaagataatcttacagatgctgag
gagagatgtgagggtctgatcaagagcaaaattcagcttgaagccaaagtcaaagagctg
actgagagactggaggatgaagaagaaatgaatgcagagttggttgcaaagaaacggaag
ctggaggatgaatgttctgagctcaagaaggacattgatgatctcgaacttactctggcc
aaagtggagaaagagaaacatgccactgagaacaaggttaaaaacctcacagaggaaatg
tcagcacttgatgaaatcattgctaagctgaccaaggagaagaaagctctgcaggaggcc
catcagcaaacactagatgacctccagagtgaggaagacaaagtcaacacactcactaaa
gccaaagctaagctggagcaacaagtggatgatcttgagggatccttggagcaagaaaag
aagctgcgcatggatcttgagagggcaaagagaaagctggaaggtgatttgaaattaacc
caggagagcattatggacttggaaaatgataaacagcaaatggaggagaagctgaagaag
aaggactttgaaattggacagctcaacagcaaaattgaggacgaacaagcccttggtgcc
cagctccagaagaaactgaaggagctgcaggctcgtattgaagagcttgaggaagagctg
gaggctgagagagctgctcgtgccaaagttgagaaacagagagctgatctgtccagagaa
ctggaggagatcagcgagaggctggaggaggctggtggagccactgctgcccagattgag
atgaacaagaaacgtgaagctgagttccagaaactgcgcagagaccttgaagaggccact
ctgcagaatgaggccacctctgctacactgaggaagaaacatgccgacagtgttgctgat
ctgggagagcagattgacaaccttcagagagtgaagcagaagctggagaaagagaagagt
gaactgaagttagagcttgatgatgtggtgtccaacatggagcagattgtcaagtcaaag
agcaacctggagaaaatgtgcagaactctggaagaccagatgagtgagtacagagccaag
gctgaggaaggccagcgcacaataaatgatttcaccatgcaaaaagccaagctgcaaact
gagaatggtgaactttccagacagctagaggagaaagactccctggtgtctcagttgacc
agaggcaagcagtcctacactcagcagattgaagatctcaagagacaactagaagaggaa
gtcaaggctaagaatgccctggcccatgcagttcaatctgctcgtcatgattctgatctg
ctgagggagcagttcgaggaggaacaggaagccaaagctgagctgcagcgtagtctctcc
aaggcaaactctgaggtggctcagtggagaaccaagtatgaaactgatgccatccagagg
actgaggagctggaggatgctaagaaaaagttggctcagcgtctccaagaagctgaagaa
gctgtggaagctgtcaatgctaaatgctcctcactggagaagactaagcacaggctgcag
aatgagattgaagatctcatggtggatgtggagagatccaatgctgctgctgctgctctg
gacaagaagcaaagaaactttgacaaggttttggctgagtggaagcagaagtatgaggag
tctcagactgaattagaaagtgcccagaaagagtctagatctttgagcactgaactcttc
aaactgaagaactcctatgaagaggtcttggatcatcttgagaccatgaagagagaaaac
aagaaccttcaagaggaaatctctgacctcactgagcaacttggagagtcaggaaaaagc
atccatgagttggagaaaattagaaagcagctggagcaggagaaggcagagatccagacc
gccttggaggaagctgagggctcacttgaacatgaggaaggaaagatcttgagagctcag
ctagagttcaatcaagtaaaggctgatattgaacgtaagctgactgagaaagatgaagag
atggagcagtccaagaggaaccagcagagagtggtcgatactctgcagagctcactggaa
gcagagactcgcagcaggaatgaagccctcagagtgaagaagaagatggagggagacctc
aatgagatggagattcagctcagccaggctaacagacaggcatcagaagcccagaaacaa
ctcaagggtcttcatggacatctcaaagatgcccaaatgcagctggatgatgcacttcgt
ggtaatgatgatctcaaagagaacatcgccattgtggatagacgcaacaatctgcttcag
gctgaactggatgagctgagatccctggtggaacagactgagagaggaaggaaactggct
gagcaggaactgctggatgtcagcgagagagttcagctcctgcattctcagaacactagc
ctgctgaatcagaagaagaagctggagggagataattctcagcttcagactgaggttgag
gaggcagttcaggagtgtaggaatgctgaggaaaaagccaagaaggccatcactgatgct
gccatgatggcagaggagctgaagaaggagcaggacaccagtgctcatctggagcgcatg
aagaagaacatggagcagaccatcaaggacctgcagcaccgtctggatgaagctgagcag
atcgccatgaagggaggcaagaagcaagtccagaaactggaagccagggtgagagagctg
gaaaacgaggtggagctggaacagagaaaggcgagcgactctgtgaaaggaatccgtaaa
tatgagagacgcatcaaggagctcacctaccagactgaggaggaccgtaagaatctggca
cgtcttcaggatctggtggacaaactccagctgaaggtcaagtcctacaagagagctgct
gaggaggcggaggaacaggccaattctaatctgggcaagttccgtaagattcagcatgag
ctggatgaggcagaagagagggctgatattgctgaatctcaggtcaacaagctgagagcc
aagagccgtgattcaggatccaagaaaggacacgatgaagagtaa
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integrated database retrieval system
