Garra rufa (doctor fish): 141300169
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Entry
141300169 CDS
T11039
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141300169 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141300169 (nup98)
03036 Chromosome and associated proteins [BR:
grf03036
]
141300169 (nup98)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141300169 (nup98)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
141300169 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
141300169
NCBI-ProteinID:
XP_073686603
LinkDB
All DBs
Position
24:complement(37599346..37613877)
Genome browser
AA seq
1809 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTTSTFGQQNTGFGATGGFGSSAFGTTNNTGGLFGTTQNKPGG
LFGSSTFSQPVTSSTSSGFGFGATSGTSNSLFGSTNTGGGGLFSQQSNAFGANKPATFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGASSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPSNPMAAGTGGLFGAAATATPSTGT
GLFGSSAPPNTGFSFGQNKTSFGTSTGAFGTTTGSLFGQPQQQQQQQQQQQQQQQQGSSL
FKPFGSAATTQNNTFSFGNSSSMGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGQTNAG
FGNVGAQSLFGNKPAGFGTTTTSAPSFGTGTGLFANKPTLTLGTNTNTSTFGFGATGTGG
GLFGNKTATTGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGTVGTFGTGGFNTGANT
LNFGAAQQPVALTDPNASAAQQAVLQQQISALAYSPFGDSPLFRNPLSDPKKKEERLKPT
NPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKS
IKKLVLKNLNNSSLYNNSLNREADDLASPSEYPQNGLSLSMDEGENRELTVERSGEDDLE
VSKFYTNPITKPIPHAQPSPLLQDTITEFNLRGVGSHRNGLEASSEDISLAEDSIQEERD
EELDAQKPPHPAGIVLSRMGYYTIPSMEELGRLLNENGECIVENFTVGRKGYGSVFFSGE
VNLTNMNLDEIVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCSQIKSP
ERLTEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQESDEEEEVPPAKLD
LKKLKTGVPPGISQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHPADSVLGE
EDGERTFEENKLRSDTPAEHEPVSASSQIASSMGINPHTLQIMKASLFAEDDECDLFQEH
GSSTFMQDVASPKVLLSGAGRPSIGALLQTKFTSGGGLFSQLPEAPFGGIPQKLSKSLAS
ESPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLESSITLGKGRLLMDAALFRGRSFR
VGWGPNWTLVHCGDQLSVTEAMKEQSAEIMGFGFLPKPTKSKPITESPFKVRMERVVGLE
PKHSAESLALYHRPLEIGLKHSTINTEDSCPFIQPAKGVDALHGYAEWIVEVNKDIGGGD
AGLAHWRQVWTLCAALWGRLGDRDVEAEQYSDYQQQLERRRCFSHWLSECAAQCIEEEVG
RALQRNHAEAIFSYLTGYCISKACKLSQKSGDHRLSLLLSQAVGSQFCRDLSALQLSDWN
SVQTDSFIEEERLRIYALLAGKPVWQSTDSCINVCSELDWKRCVAVHLWYMLPPTASVAD
ALAKYESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMEETESKKPLYDICFHLLKLYS
DRHYSLQQLLDPSTVTADRLDYRLSWHLWNVLQALNYNHLSTSCQGLLHASYAAQLETVG
LWELAIFVLLHIPDSKRRESAVREMLNLHCSLEETEESMEKEQFLTEKLLIPIKWIHQAK
AFCACREGDKHSEALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERS
VQIQDWDTSGRVYLDYIHVIQTLQDIQQTESPGYELERLHTEVTSLCSRIERLPCSKAKD
RLAQSEMAKRVANILRVVSSLQHGGEGTRHIPLCQLAPHIGRLPMPEDYALEELRSLTQS
YLQEYVISH
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggagggacaggaggatttggaactact
tcaacatttgggcaacaaaatactggatttggagcaacagggggctttggatcttcagca
tttgggacaacaaacaatacaggtggactgttcgggaccacccagaacaaacctggtggt
ctatttggctcaagcaccttcagtcagcctgtcacatcctccaccagtagtgggtttggg
tttggtgccaccagtggcacgtcaaacagcctctttggaagcaccaacaccggaggtggt
ggattgttttcccagcagagtaatgcctttggtgccaacaaaccagccacttttggcact
tttggtaccagcaccagtagcggtggattatttgggacaacgaacacaacatccaaccct
tttggaggaacatcaggctctttgtttggggcatcaagttttactgctgcaccccctggc
acaacaatcaaattcaatccaccaactgggagtgacacaatggtaaaaggaggtgtgaca
accagcatcaacaccaaacaccagtgtatcactgcaatgaaggaatatgagaacaaatct
ttagaggaattgagactcgaggattatcaggcaggaaggaagggtccttccaatcctatg
gcagctggcacaggtggtctatttggagcagcagccacagctactcccagtactggcact
ggactctttggatcctcagctcctccaaacactggcttcagctttggccagaacaagacc
tcatttggcacaagcactggggcttttggtacaaccacaggaagtttgtttggccagccg
cagcaacagcagcagcaacagcagcaacaacaacaacaacaacagcaaggttccagtctc
ttcaaaccatttggctcagctgccaccacccaaaacaacactttttcctttggcaacagc
agcagcatggggctgtttggcaatacggctgcttctcaggctggaggactgtttggaaac
actaacacaagtactgccacaggcttcggcacaggaattttcggccaaactaacgctggt
tttgggaacgtgggtgcacagagtctttttggtaataagcctgctggatttggcaccacc
accactagcgcaccctcctttggaacaggcactggtctgtttgcaaataagccaacactc
actctagggactaacacaaacacctcaacctttggattcggtgcaactggtactggtggg
ggcctttttgggaacaaaactgcgacgacaggcctgggaacaggattgggaactggcttt
ggaggagctgtaggaactggccagacatcattgtttgggaacaaccagaacaagctgggc
tccacccttgggacagtgggcacctttgggactggaggcttcaacactggagccaacact
ctgaattttggtgctgctcaacagcctgtggctctgactgaccccaatgcatcagctgcg
cagcaagccgtcctccaacagcagatcagtgcattggcctattctccttttggagattca
cccctcttcagaaatccactgtcagaccccaaaaagaaggaagagcgtctgaagcccaca
aatccagctgctcagaaagccttgaccacccctactcagtacaaactgacccctcgtcct
gccacccgtgttcgtcccaaagctctgtcttcctcaggctcctctaaatctcagctcttt
gatggacttgatgatgatgaaccctctcttaacaatggagccttcatgcctaggaagagc
ataaagaagcttgttttgaagaatctgaataacagcagtctatataacaactctttgaac
agagaggctgatgacttggcctccccttcagagtacccacaaaatgggctcagtctgagt
atggatgaaggagagaacagagaactaactgtggagagaagtggggaggatgatctggag
gtctccaagttctacaccaacccaatcaccaaaccaattccacacgcccagccgagcccc
ttgctacaggacactatcactgagtttaatttgcggggagttggcagtcatcgcaatggc
ctggaggccagcagtgaggacatctctctggcagaggattccattcaggaggagagagat
gaggagctggatgctcagaaacctcctcacccagctggtatagttcttagccgtatgggc
tactacaccattccatcaatggaagagcttggaagattgttgaatgagaacggagagtgt
attgtggagaacttcactgttggcaggaaaggctacggttcggttttcttctctggtgag
gtgaatcttaccaacatgaatttggatgagattgtgcacttcaggcgtaaggagataatc
gtttaccccgatgacaaagacaagcctcctgtcggagagggactaaacagacgtgctgag
gtgactctagatggtgtgtggcccaatgacaagacaacatgctctcagattaagagtcca
gagaggctgaccgagatgaattatgagggccggcttgaggcagcctcacgtaaacagggt
gcccgcttcttggaataccgccctgaaactggctcctgggtctttgaggtagcccacttc
tcaaagtacggactccaggaatctgatgaagaagaggaagtccccccggccaagcttgac
ctgaagaagctgaagacaggggttccacctgggatctcacagcttccactgacccagcag
cagatggcgccacaggctcagagtacagcagttcttgagctgctcagccgtgtgtcagag
ttggacagtgatatggctgacattactcaagagcacccggcagacagtgttttgggtgag
gaggatggagaaagaacttttgaggagaacaaactgagatctgatactcctgccgagcat
gagcctgtgtctgcatcaagccagattgcttcctcgatgggcattaaccctcatacctta
cagattatgaaggcctctctctttgcagaggatgatgaatgtgacttgtttcaagagcat
ggttcttcaacgttcatgcaagatgtggcttcccccaaagttttgctttctggagctggt
cggccatcaattggagccctattacaaaccaagttcacctcaggaggagggcttttttcc
cagttgccagaggctccttttggtggaatacctcagaagcttagcaagtcattagcatca
gaatctccatggccatcgttgggtccttccttcctgttgccggcccctcctccagaacct
actcttcggactgtgggggcccgcaggctaggggggccagtacctctagagagctctata
actttgggaaaaggccgtctgctgatggatgctgctttgttcagagggcgatctttcaga
gtgggctggggtcctaactggacactggtacactgtggagatcaacttagtgtaacagag
gcaatgaaggagcagtcggcagagatcatgggatttggcttcttacccaaacctaccaaa
agcaaaccgatcaccgaaagtccatttaaagtgcgtatggagcgggtggttggcctggag
cccaagcattcagcagagagccttgctctgtatcacagaccactggagattggtctaaag
cacagtacaatcaacactgaggactcctgtcccttcatccagccggcaaaaggagtggat
gctctgcatggttatgcagaatggattgtcgaggtcaacaaagatataggaggaggggat
gctggtctggcccactggcgccaagtttggactttgtgtgctgctctttggggccgtctg
ggtgaccgggatgtggaagctgagcaatactcagactaccagcagcagcttgagaggcgg
aggtgcttctcgcactggctctctgagtgtgcggctcagtgcattgaggaggaagtgggt
cgagcccttcagcgcaatcatgctgaggccatattcagttaccttactggttactgcata
agcaaggcctgcaaactgtcccagaagagtggggaccatcgtctttctcttttgctgtct
caggctgtgggctctcagttttgtagagatctatcggctctgcagctcagtgactggaac
agcgtgcagacggactctttcatagaggaggaaaggctgcgaatctatgctttgcttgca
ggcaaaccagtgtggcagtcaacagacagctgtataaacgtgtgctctgagctggattgg
aagcggtgtgttgctgttcatctttggtacatgctgcctcctactgcatctgtagctgat
gcccttgccaaatacgaatctgcatttcagggttcagaggaagtgaaaaggtatgcttgc
cctcccttacctccttatgtagatgaactcgagttgttgggtttggatgaagagatggag
gagacagaatcgaaaaagccactctatgacatctgcttccacctgctcaaactttacagt
gacaggcactacagcctacagcagctacttgatcccagcacagtaactgctgatcgtctg
gactaccggctgagctggcacctgtggaacgtgttgcaggctcttaactacaaccacctg
tccacctcatgccagggcttgctgcatgccagctatgctgcccagctggagactgtagga
ttatgggagttggctatcttcgtgctgctgcacatacctgactctaagcgtagagagagt
gctgtgagagagatgctcaacttgcattgctcccttgaggagacagaagagtcaatggag
aaagagcagtttctcacggaaaagttgctgatccccatcaagtggatccatcaggctaag
gccttctgtgcttgtagagagggagacaaacatagtgaggccttgcacctttacaaggcc
ggccattggaatcactgtcatcggctggtcattcagcacctggcctcagactgcatcatt
aatgataatcataagtaccttctggaattcctagaggggttagcagtgcccgagcgcagt
gttcagattcaggactgggacacgtctggacgagtctaccttgattacatccatgtcatt
cagacactgcaggacatccaacagacggaaagcccaggttatgagctggagcgactgcat
acagaggtgacgtctctctgcagtagaatagagcgcctcccctgctccaaagctaaagac
cgacttgcgcaatcagagatggccaaacgtgtggctaacatccttcgggtggtctcgagt
ctccagcacggtggtgaaggcacccgacacatccctctttgtcagcttgctccacacatt
ggacgtctacccatgccggaggactatgctttagaggaactccgcagccttactcagtcg
tacctgcaagagtatgttatcagtcactga
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integrated database retrieval system
