Garra rufa (doctor fish): 141300457
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Entry
141300457 CDS
T11039
Name
(RefSeq) nucleoporin p58/p45-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141300457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141300457
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141300457
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
Nup49_C
FapA
PSY3
PBC
Motif
Other DBs
NCBI-GeneID:
141300457
NCBI-ProteinID:
XP_073686837
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Position
24:complement(25163426..25178569)
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AA seq
599 aa
AA seq
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MSSFNFGTTTLGSTGTGGGFSFGAATSTPAAGTGGLSFGGFGTPTTTPAATSTTSTLGFG
TSLFAQKPTTGFSFNTPASGAVAAAASTTGLALGSLAPSTAASAGFSLGFGKPAASATPF
SLTTTTAAPTGTGLTLGSVLTSTAPQASSTGFSLNLGGAAATSSAPASGFSFGAGAGTGL
FSNPALTGLGQSTLGGPLSLGGLVSASVAATSAPAPSLGLGGVDFSTSSEKNTDKLSSTR
PEDSKALKDENLPGPICQDVDNFQKFVKEQKQVQEEISRMSSKAIVKVQEDIKTLRQLLS
ICASGLQRNSLSIDKLKLETSQELKNADIALRTQKIPPGLQHENTAPSDYFRALVEQFEV
QLQQYRQQIEELENHLTTQSSGSHITPQDLSMAMQKLYQTFVALAAQLQGAHENVKTLKH
QYLGYRRAFLDDSTDIFESKRIASKKWQSSPHVTTGPAPFGSIPNAAAVAMAATLTQQQQ
PAPGPQAPLGASFGTPFSSGIGTSMGSSSLGAFGSGPGFGGVATGGLSFGFSSSKPSGGS
LSAGFGTSNTSGFNFSNPGINASAGLTFGVSNTQTPGFGAGGPLLQLKKPPAGNKRGKR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctttaacttcggcacaacgaccctcgggtccaccggtaccggagggggtttc
tcatttggagctgcgaccagcacacctgctgcaggtacgggtggactctcatttggaggg
tttggcacaccgacaaccacaccggccgccaccagtaccacatcaacactgggatttggg
accagtttatttgcacagaaaccaacaactggattctcctttaacacacctgcctcaggg
gctgttgctgctgctgcatccactactggccttgctttaggaagtcttgccccttcaacc
gctgcttctgctggtttcagcctgggcttcggaaagccagcagcctccgctacacctttc
tcactgacaaccaccaccgctgcacctacaggcacaggcctgactctgggatccgtcctg
acctccacagcccctcaggccagctccactggcttctcgctcaacttaggaggagctgcc
gccacttcctccgctcccgcctcgggtttttcctttggtgcgggtgccggtactggtcta
ttttccaaccctgccttgacaggtttgggacagtccactttaggtggacctctgagtctg
ggtggtttagtctctgcctctgtcgcagccacctctgcgcctgcgcccagtctcggcctg
ggtggagtagacttcagtacttcttctgaaaagaacactgacaagttatccagcaccaga
ccagaggacagcaaagccctcaaagatgaaaacttgccaggtccgatttgtcaagatgtg
gacaactttcagaagtttgttaaggagcagaagcaagtccaggaagagatcagcaggatg
tcttctaaagccattgttaaagtgcaagaagacatcaagacactcagacagcttctgtcc
atctgtgccagcggcctgcaaagaaattcactctccatagacaagctaaagttggaaact
tctcaggaattgaagaatgccgacatcgcacttcgcacccagaagatccctcctggactc
caacatgagaacacagcaccttccgattatttccgagctcttgtggagcaatttgaggtg
cagttacagcagtaccgtcagcagattgaagaactggagaatcatctgaccacccagagc
agcggatctcacatcacccctcaagatttgtccatggccatgcagaaactctatcagaca
tttgttgcacttgctgcacagttgcagggagctcatgagaatgttaagactctcaaacat
cagtacctgggctaccgacgagccttcctcgacgactccactgacatattcgagtcgaaa
cgcatcgccagcaagaaatggcagagctctccgcacgtcaccacaggccccgcccccttc
ggcagcattcccaacgcagcagccgttgccatggctgccactctcactcagcagcagcag
ccggctccaggaccacaggcgcccttgggggccagttttggcactcccttttcctcgggt
attggcactagcatgggctcatccagcctcggagcgtttggtagcggccctgggtttggg
ggtgtggcaacaggaggtttgtcgttcgggttttcctctagcaagccatctggagggagc
ctgagcgcagggtttggaacatctaacacctctggcttcaacttcagtaaccctggaatc
aatgcgtcagctgggttgacctttggcgtttccaacacacaaactcctggatttggggca
ggagggccactgctacaactcaaaaagccaccagcgggaaataaaaggggcaagagataa
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