Garra rufa (doctor fish): 141300461
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Entry
141300461 CDS
T11039
Symbol
cdk13
Name
(RefSeq) cyclin-dependent kinase 13
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141300461 (cdk13)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
141300461 (cdk13)
2.7.11.23 [RNA-polymerase]-subunit kinase
141300461 (cdk13)
Protein kinases [BR:
grf01001
]
Serine/threonine kinases: CMGC group
CDK family
141300461 (cdk13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
141300461
NCBI-ProteinID:
XP_073686842
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Position
24:9313066..9347422
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AA seq
1339 aa
AA seq
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MPNPEIVPREGRGRSPPPQRSQMEAIRSKSRRERHREKGRSSSSSSSRRKKHKHAREKQQ
QQQQSWQQQDGVYDGDVRTLVEYDDVSSQSERFSGSPSPRTDTLSVDRLSEAELQDSSYG
GASTPGRREHNSSSRRKDATGSAEKGRPEKDMKRNRSSRERDAAFKSRSGVRNHDSNGRK
PSSAAQADKKESKRHKSKSKSEKDPPSAYREPPQAYRDDREELRAYWRSSPSFKAADSPY
GTSYSYGYQSPNTNYPFISRRSPRRLSPSSTYYGRDSELYGAYNAAKSPSSYSSSKRKRS
PSSPYWRRSPSYGRHSPLEQGEFTSSPYGQRRRSRSPYRKSLSPSPDVRRTVKSRSRSPY
QSTRHSRSRSRHRHSRSRSRPSSLSPSTLTLKSSLAAELSKQKKAKAAEAARVKNSSNAS
TPTKGSSSSSVAPQPSPVINHTTKKTRPPSPPPVSEKGPRTPVSSQPQSPVERPAKRISD
TSQASREAKVKEDKKKGGQSMQVKDKDREKAAAPAVASLPPAANNLDHLDGNDSSLKESS
ANTGKKKPERKARHLLADLPLPPELPGVTPGSPRSPPDDKKMPTPRKRPKICGPRFGEIK
ETEIDWGKRCVDKFEIIGITGEGTYGQVYKAKDRDTAELVALKKVRLDNEKEGFPITAIR
EIKILRQLNHKSIINMKEIVTDKEDALDFKNDKGAFYLVFEYMDHDLMGLLESGLVHFNE
SHIKSFMRQLLEGLDYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYT
NKVITLWYRPPELLLGEERYTPAIDMWSCGCILGELFTKKPIFQANQELAQLELISRICG
SPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFAFIPLMALDLFDHMLALDPSKRCTAEQ
ALKSDFLKDVDPTKMPPPDLPLWQDCHELWSKKRRRQKQMPEELTAPKAPRKELGLDDSR
SNTPQGFPAAGGHKGPSAAATAALLDPKAPNSQLTQEQLAVLLNLLQSKSTPAGSAQFAQ
TMGSKMNPETLQQLTQALPPGPVESERPPEPPPPPKVSKPPQPPPSGGGAPRTPPMPKPP
SPPTPQPSGKGDGEASAAATQTAVTMLLAQLLKVQQGAGGEVIGFEGAEGGISNAAGPSE
PPPEPSPVSPVAEGSSSSSRPLEPLSILPPDQRPPEPPEPPPCADLDYRQAPETKPALPS
SAAPGEAPRPPEPDYPPPPRPTEAPGYGTDFSLPPPPFGYADSYLGHMMGGGMPPHPPLA
PEAFAHGGAASAAGAGGGSMVFSGDKDHRFEYNHSPLAVGPGPPPPPGQAWTSPSQSGAP
PLPLGYVPAAALRGRGLPF
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgccgaacccggagatcgttccccgcgagggccgggggagaagcccgccgccacaaagg
agtcagatggaggcgatacggagcaagagccgccgagagcggcaccgggagaaggggcga
tcctcgtcctcctcctcctcccggagaaagaaacacaagcacgccagggagaagcagcaa
cagcagcagcagtcgtggcaacagcaggacggggtttatgacggggatgttcggacttta
gtggagtacgacgacgtgagctcgcagtccgagcgcttctccggcagcccgtcgcccaga
accgacacgctgtccgtggaccggctgagcgaagccgagctccaggactcgagctacggc
ggcgcttccacgccgggcaggcgggagcacaactcttcctctcggaggaaagacgcaacc
ggatcggcggagaaaggacgcccggagaaggacatgaagaggaaccggtccagccgagag
cgggacgctgcgttcaagtcccgtagcggcgtgagaaatcacgacagcaacggcaggaag
ccttcgtctgcggcccaggcggataaaaaggagtcgaagcgacacaaaagcaagtccaaa
tcggagaaggaccctccttctgcctatagggaaccgccgcaggcttatagggacgaccgg
gaggagctcagggcctactggaggagcagtccgagtttcaaagcggcggatagtccctac
gggacatcttattcctatggataccagtcccccaacacaaactacccgtttatttccagg
aggagcccccggaggctctctccgagctcgacctactacggtcgggattcagagctgtac
ggtgcctacaacgctgcgaagtcgccgagttcgtactcgagtagtaagaggaagcgctcc
ccgtccagtccgtactggcgcaggtctccgagctacggccgacacagtcctttggagcag
ggcgagttcacctccagcccgtacggccagcgcaggcgctccaggagcccctacagaaag
tccctgagccccagtccggacgtcaggcggacggtaaagtcccgcagcaggagcccgtac
cagtccacacgtcattctcgctcacgcagccggcaccgtcactctcggtcccgcagccgg
ccctccagtctgtcccccagcacactgaccctcaagagcagcctggccgccgagctcagc
aagcaaaagaaagctaaggctgccgaagccgcccgcgtcaaaaactccagcaacgcctcc
accccgaccaagggctcctcatcctcctccgtcgctccccagcccagccccgtcatcaac
cacacaaccaagaagaccaggccaccctcaccgccgcctgtgtccgagaaaggccccaga
accccagtgtccagtcagccacagtctcctgtggagcgacccgctaagaggatctcagac
acttcgcaggccagcagagaagccaaggtaaaggaggataaaaagaaaggaggacagtcc
atgcaggttaaagacaaggatcgagaaaaagctgctgctccagctgtagcctctcttcca
ccggcagccaacaatctggatcatctggatggaaacgacagtagcttgaaggagtcttca
gcaaacacggggaagaagaaacccgaaaggaaagcccgtcacctcctcgcagacctccct
cttcctccagagctcccaggggtcacccctggttctccccgcagcccgcctgatgacaaa
aagatgcccactccacggaagagaccgaaaatatgtggtccacgctttggagaaatcaag
gagacggagatagattggggaaagcggtgcgtcgataagtttgaaatcattgggatcact
ggagaaggtacttatggacaggtgtacaaagccaaggacagagacactgctgagttggtg
gctctaaagaaggtccgtttggacaatgagaaggaaggcttccccattacagccatcagg
gaaatcaagatcttgcggcagctcaaccacaagagcatcatcaacatgaaggaaatcgtc
actgataaagaagatgctttagacttcaaaaacgacaaaggggcgttttacctggtgttt
gagtacatggaccacgatctgatgggcctcctggagtcaggccttgtgcacttcaatgag
agccacatcaagtctttcatgaggcagctgctggaaggactggattactgccataagaag
aacttcctgcacagggacatcaagtgctccaacatcctgctcaataacaagggtcagatc
aagctggcagatttcggattggctcgtctttataactctgaagagagtcgaccgtacacc
aataaagtgatcactctgtggtaccggccgcccgagctgctgctgggagaagagaggtac
acgcccgccatcgacatgtggagctgcgggtgcattctgggagagcttttcacaaagaag
cccatcttccaggccaaccaagagctggcgcagctggagctcataagtcgtatctgtggc
agtccttgtcccgctgtgtggccggacgtgatcaagctgccctacttcaacaccatgaaa
ccaaagaaacagtaccggcggaggttaagggaagagtttgcttttattcctctgatggcc
ctggatttgttcgaccatatgcttgcgttggatccgagcaaacgctgcactgcagaacaa
gctctcaaaagtgacttcctcaaagacgtggacccaaccaagatgcctccacctgatctc
cctctgtggcaggactgccatgaattgtggagtaagaaacggcgccggcagaagcagatg
ccggaggaactaactgcccccaaagctccccggaaggagctgggcctggacgacagccgc
agcaacacgccacagggcttccctgccgccggaggacacaaaggtccaagtgctgctgcc
actgcagccctgctggaccctaaagctcccaactcacagctgactcaagaacagctggct
gtgcttctgaacctcctccagtccaaaagcactccggcgggatcggcccagttcgcccag
accatgggttcgaagatgaacccggagacgctacagcagctgacgcaggcattgccccct
gggcctgtggagtctgaaagacccccagaaccgcctccgccccccaaagtctccaaaccc
cctcagccgcctccatcagggggcggagcgccacgtacccctcccatgccgaagccgcct
tcgcctcccaccccgcagccgtcggggaaaggcgacggagaggcttcggccgcagccacg
cagaccgccgtcaccatgctcctcgctcagctcctcaaagtgcagcaaggtgcaggagga
gaggttatagggtttgaaggagctgagggcggcatctcaaacgcagcaggtccatctgag
ccgccacctgagcccagtcctgtatctccagtagctgaaggcagcagctcatcctccagg
cctctagagcctctctccattctcccgccagaccagagacccccagaacctccggaaccg
cctccctgcgcagacctggactaccggcaggcccccgagaccaagccagctctgccgtcc
tccgcagccccaggagaagctcccagacctccggagccggactatccgccgccacccagg
ccgacagaggcacccgggtacggcacggacttcagcctgcctccgccgccgttcggctac
gcggacagctacctcggccacatgatggggggcgggatgcctcctcacccgcctctcgcc
ccggaggcgttcgctcacggaggcgctgccagcgcggcgggagctggaggcggcagcatg
gtgttcagcggagacaaggaccatcgctttgagtacaatcacagcccgctggccgtgggc
cccggaccgccgccccctccgggacaagcctggacttcgccgtcccaatcgggggcgcca
cctcttccgctcgggtacgttccggcggcggcgctgcgaggcagaggacttcctttttga
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