Garra rufa (doctor fish): 141300492
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Entry
141300492 CDS
T11039
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
141300492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141300492
03036 Chromosome and associated proteins [BR:
grf03036
]
141300492
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
141300492
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
141300492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
MSL3_chromo-like
Motif
Other DBs
NCBI-GeneID:
141300492
NCBI-ProteinID:
XP_073686881
LinkDB
All DBs
Position
24:39549088..39623832
Genome browser
AA seq
692 aa
AA seq
DB search
MMQSEDRKKKKASLNPRSVSDEYSLRVSTVTSDLSDSQNRLMRLSASSQERAKDEPTKMK
NKVSTSQSVSSKKRLWCWDQYLEEEGAQPAPPQLFTEFQAFPEGRNGFKVGMRLEGIDPL
HPSMFCVLSVAEVIGFRLRLHIDSYSECYDFWVNADSPDIKPAGWCETTAHKLHPPKGYN
PDEFNWEKYLEACNAQAAPKNLFRSQSSSSSVSAFAVGMKLEAVDRKNPCLVCVASVADI
VDDRFLVHFDNWDDTYDYWCDASSPYIHPVGWCQDHGRPLTAPQGHPNPEHFIWEDYMED
TGASAAPSQAFSEISPHGFQTHMKLEAVDRRNPMLIRVATIADIEDYRVKVHFDGWHEKF
DFWVDSDLPDLHPVGWCSRTGHPLEPPLTHTGLSDMKSSVTQGVCPTPGCRGVGHIKGAK
YTGHHSAFGCPYSDMNMKKEVVLPDRLGGEKQITFVPVHFVQKTKRLCPDEDDEEEEEEE
EDGKEDISPVDNRVMMAAYDGAPRLRGRPAMVKRELKDEPVTAGQKPLSPLGKRGRLPSR
LSQSTKYLRIKDEEDDIDVNSVISERNMDSLQQALHQSVFLSAMSAHPSRDLPLCWEQHC
KLLPGVAGVQASRVAHWTVEEVADFIHSLPGCEEQAKQFRDEQIDGKAFLLLTQRDIVKI
MSVKLGPALKIYNSILMFKHAEDKKQPAAGDT
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagagtgaggaccgcaagaaaaagaaagccagtttgaaccccagaagcgtgtca
gacgagtacagtctgcgagtgagtaccgtgacctctgacctcagtgactctcagaacaga
ctgatgagactctctgcttcttctcaggagcgagcgaaagacgaacccacaaagatgaag
aataaagtttctacttcacaatcggtgagcagtaagaagaggctgtggtgctgggatcag
tatctggaggaagagggagcacagcccgctcctccgcagctcttcactgagttccaggcg
tttcctgaaggcaggaatggctttaaggtggggatgaggctggaaggcatcgacccgctg
catccgtccatgttctgtgtgctgtctgtggctgaggtgatcggcttccgtctgcggctc
catatagacagttactcagagtgctatgacttctgggtaaacgccgactctcctgacatc
aaaccggcgggatggtgcgagaccacggcccacaaactccatccacccaaaggttacaac
ccggatgagtttaactgggagaaatatctggaggcatgcaacgctcaagccgcaccaaag
aacctcttcagatcccaaagcagctcgtccagcgtctctgcgtttgcggtgggcatgaag
ctggaggcggtggaccggaagaacccgtgtctggtttgtgtggccagcgtagccgatatc
gtggacgaccgcttcctcgtgcatttcgacaactgggacgatacctacgactactggtgt
gacgccagcagtccgtacattcacccggtgggctggtgtcaggatcacggccggccgctc
acagcacctcagggacatccaaatccagagcacttcatctgggaggattacatggaggac
acaggcgcgtctgcagctcccagtcaggccttcagtgagatatcgccacacggcttccag
acgcacatgaagctggaggcggtggacagacgaaaccccatgctgatccgcgtggccacc
atcgcagacatcgaagactacagagtcaaagtgcattttgacggctggcatgagaagttt
gatttctgggtggattcggacctgccggatcttcatcccgtgggctggtgttccaggacg
ggtcacccgctcgaaccgccgctcactcacacagggctctcagacatgaagagctccgtt
acgcagggtgtgtgtccaaccccgggctgcaggggcgtcggccacatcaaaggagcaaaa
tacaccggacaccacagtgccttcggttgcccgtattctgacatgaacatgaagaaggag
gtggtgctgccggatcgtctgggaggagagaagcagatcaccttcgtcccggtgcacttt
gtgcaaaaaaccaaacgcctgtgtccagatgaggacgatgaggaggaggaggaggaggaa
gaagatgggaaggaggacatcagccctgtggacaacagggtgatgatggcggcgtatgac
ggtgctcctcgtctgcgcggtcgtcctgcgatggtgaagagagagctgaaggacgagcct
gtgacggcgggacagaagccgctgtcgcccctcgggaagagaggacgtttgcccagcaga
ctctctcagtccacgaagtatctgcgtatcaaggacgaggaggatgacattgatgtgaac
agcgttatttcagagcgtaacatggacagtctccagcaggcgctgcatcagtccgtcttc
ctgtcggccatgtctgctcacccgagccgcgacctgccgctgtgttgggagcagcactgt
aagcttctgcccggtgtggccggcgttcaggccagtcgtgtcgcccactggaccgtcgag
gaggtggctgatttcatccattctttacccggctgtgaggagcaggccaagcagttcaga
gatgagcaaatcgacgggaaggcctttctgctgttgacgcagcgagacatcgtcaagata
atgagcgtgaagctcgggcccgccctcaagatctacaactccatcctgatgttcaaacac
gccgaggataagaagcagccggcggccggcgacacatga
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