Garra rufa (doctor fish): 141300532
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Entry
141300532 CDS
T11039
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141300532 (nphp3)
Cilium and associated proteins [BR:
grf03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
141300532 (nphp3)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_MalT
TPR_2
TPR_8
TPR_16
TPR_14
TPR_11
NPHP3_N
TPR_19
TPR_6
AAA_16
NACHT
AAA_22
IPGA1_CC
ATPase_2
Uso1_p115_C
DUF2225
14-3-3
AAA_14
KAP_NTPase
Viral_helicase1
PH_met_RdRP
DUF4635
AAA_19
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
141300532
NCBI-ProteinID:
XP_073686922
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All DBs
Position
24:complement(13919614..13957344)
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AA seq
1303 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
ELEYAAEYERLRKDYEIFRVSKNNEIASMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKLQQLQAQ
GIQIYDPADSDSDDNRTTVTTAGTQCEYWSGGVLGSEPSMGSMMQLQQTHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLICTQETKAELQTFIQTYSL
RLQRFCEGQGHFYLNVSFPEEKAALYAAERRQEIERSSVCVLLLKSSVSSCVVEDVEEAF
VKTPDSRPLLLYLRTGERKGEKEEASTLSPSTRDLLERVNKADKSAKLKVVDHAGSVEEG
AALIFTQLERVIKQELLGLEFEESGAVEEREEEDSGDVLWDLHDEQEQIEAFQQACSAAS
RFSFQKYVDRLNDMVAAPPPTPPLLVSGAPGSGKSLLLAKWIELQQKHSPNTLILYHFTG
HPLSTSTDPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHHGNIIIII
DSIDQIQNAERHMSWLIDPLPANVRVLVSVNVETCPQAWRLWPTLHLDPLNPREVKSVIG
TECVNSDIKLTKEQEKKLERHCRSAATCNALYISLLARLITHSRSSWTLERTLQQCALCQ
DTVSLYRLGLKVALDSLSTEQEKHILKELLCLVCASHNGISESEALELFPDLSFSALTSL
LHNLERLLIITYACGLIRFQHPQACEAINQEFLDGGKCRGSYREKIIRFFSEQLKQDRVT
WRVADELPWLLQQQEDRSKLQMSLLNLFVSQNLYKRGHFSELLTYWQFVGKDKCSMATEY
FDSLKQFEKTCESEQSMSQLANLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVHWRKFGNAEQLYKQALEICENAYGPEHSTIARELDSLSLLYQKQNK
YEQAEKLRKRSVKIRQKTARQKGHLYGFALLKRRALQLEELTLGKDSPDCAKTLNELGVL
YYLQNNLDAAKMFLSRSLEMRQRVLGPDHPDCAQSLNNLAALHCERKEYESAEELYERAL
DIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATAL
VNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAE
LYKRAMEIKEAEPSLVCGKAPSRHSSSGDTFSLRSPALPHTSR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggcatcctctctggtgagccccggtgaggtgattgaggatgcgtacggtggt
gagggaggagaggcgtgtgagataccggtggaagtgaagcctaaggcacgtctgttgcgg
agttccttccgccgcgggcctcgtgtcatcggcgccagcttcaaatccaccggatcggtg
gagctggagtatgcggctgagtatgagcgcctcaggaaggactacgagatctttagggtc
agcaagaacaatgagattgcatccatgcagaagaaagaagccaagctggatgaggagaac
aagagactgcgtgctgagctgcaggctcttcaaaagacttaccagaagattcttcgagag
aaagaaagtgccctggaggcaaagtatcaagccatggaaagagctgccacctttgagcat
gacagagacaaggtcaaacgacagtttaagatattccgggagactaaagaaaaggaaatt
caggatttgctgcgggcaaaacgagatctggagtctaaacttcaacagctgcaagctcaa
ggcattcaaatttatgatccagcagactcggattcagacgataaccgcaccactgtcacc
actgcaggaactcagtgtgagtactggagtggtggggtgttgggcagtgagccgtccatg
ggcagtatgatgcagttacagcagacacacaggggtccagaatttgctcacagtctcatc
gacgtggaggggccgtttgccaatgtcagcagagatgattgggatgcggctgtagccagt
ctgctgcaagtttctcctcacgtctctcaggctctgtggagtaacacagtccgctgctac
ctcatatgcacacaggaaaccaaagcagagctacagacgtttatacagacctattctttg
aggctgcagaggttttgtgagggtcagggccatttttacctgaacgtgtcatttcctgag
gagaaagctgctttgtatgctgctgaacgcaggcaggagatcgagaggagctctgtgtgt
gtgctgctactcaaatcctcagtgtccagttgtgttgtagaggatgtggaggaagcattt
gtgaaaaccccagactctcggcctctcttgctgtatttgcgaactggtgagagaaaagga
gaaaaggaggaggcgtccaccctcagtccatccactagagacttgttggagagagttaac
aaagccgacaagagtgccaaacttaaagttgtggatcatgcagggtctgtggaggaagga
gctgctcttatctttactcaactcgaaagggttatcaaacaggagttgttgggattggag
ttcgaagagagtggagcagtagaggagagagaagaggaagactctggtgatgtgctgtgg
gaccttcatgatgagcaggagcagattgaggcgttccagcaggcttgcagtgctgcttcc
agattcagctttcagaagtatgttgaccgactcaatgacatggtagctgcccctccaccc
accccacctctgctggtatctggtgcacctggatcgggcaaatcacttttgcttgctaaa
tggatagagttacagcaaaaacactctccaaacaccctcatcctgtatcacttcacagga
catcctctttctaccagcacagatccagtgctcatcattaagcgcctcacagtaaagttg
ctccagcatttctggtcaatttccggcctctcgatggacccttcgaagatcctcgaggag
ttcccacgctggctagagcggctgtctgcacgtcaccacgggaacatcataatcatcatt
gattccattgaccaaatacaaaatgctgagcggcacatgagttggctgattgatcctctt
cctgctaatgtgagagtgctggtgtcagttaatgtggagacctgtccacaggcatggaga
ttgtggcccacgctgcacctggacccactcaatcccagagaggtgaagagtgtcatcggc
acagagtgtgtgaacagcgatattaaactcaccaaagaacaggaaaagaagttggagaga
cattgccgttcagctgcaacttgcaacgcgctctatatctcactactggcacgacttatt
acgcactccagatcctcctggacgttggagaggactctacagcagtgtgcgttgtgtcaa
gatacagtatcactctacagactgggcctgaaggttgcgctagactctctcagcactgaa
caggaaaaacacatcttaaaagagttattgtgcctggtgtgtgccagtcacaatggcatc
agtgaatcagaagctttggaactgttcccagacctgagtttttccgctcttacctcactg
cttcacaatctggagagactcctcatcattacctacgcctgtggcctcattcggtttcaa
cacccacaggcgtgtgaagcaatcaaccaagagtttctggatgggggcaaatgtcgtgga
tcatatagagagaaaatcattcggttcttcagtgaacagctgaagcaagacagagtgaca
tggagggtggctgatgaattgccatggttactgcagcagcaggaagatcgaagtaaactc
cagatgagtctgcttaacctgtttgtgtcccagaatctgtacaagaggggtcatttctct
gagctgctgacatactggcagtttgttggtaaggataaatgctcaatggcgacagagtat
ttcgactcactgaagcagtttgagaagacctgtgagagtgagcagagcatgagccagttg
gccaacctgtacgagacactgggccgcttcctcaaagacctgggactgctcagccaggcg
gtggcccccttgcagcgctccttagagatccgtgagacagctctggacccggaccaccca
agtgtggctcagtccctgcaccagctggcaggggtttacgttcattggaggaaatttgga
aacgcagagcagttgtacaaacaagctttggagatttgtgaaaatgcatacggccctgaa
cacagcaccattgctagagaactagattcactttcgctcctctaccagaaacaaaacaaa
tatgagcaggctgagaaattgagaaagagatccgtcaaaatcagacagaagacagcacga
cagaaaggccacctgtatggttttgctctcttgaagcggcgggcactgcagttggaggaa
cttactcttggcaaagactcaccagattgtgccaagactctaaatgagcttggagtgctt
tattacctgcagaacaacctggatgccgcaaagatgttcttgagccgatccttggagatg
cgccagcgtgtgctagggccagatcaccccgactgtgctcagtctctgaacaacctagct
gcgcttcactgtgaaaggaaagagtacgagagtgctgaggagctgtacgaaagagcactt
gacatccgcaaacgagcactcgccccagatcatccctctctcgcctataccctcaaacac
ttggccatgctatacaaacgcagggggaagctggaaaaggcagttcctctatatgaacta
gctcttgaaatcagagaaaagagctttgggcctaaacatcccagtgtagccactgctctg
gttaaccttgcagtgctctattgccagctgaagcagcacagtgatgcattgcctttgtac
gagcgtgctctaaaggtttatgaagacagtctcggccgactacaccctcgtgttggagag
actctgaaaaacctggctgtactcagctatgaagagggagatttcgagaaagctgctgaa
ctctacaagcgagcaatggaaataaaggaagcagagccatctctggtgtgtggtaaggct
ccctcacgccactcatctagtggcgacacctttagcctgcgaagccctgcccttcctcac
acctcaaggtga
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