Garra rufa (doctor fish): 141300591
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Entry
141300591 CDS
T11039
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141300591 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Other domain-containing proteins
Patched domain-containing proteins
141300591 (ptchd1)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
141300591
NCBI-ProteinID:
XP_073686979
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Position
24:complement(25424872..25440184)
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AA seq
887 aa
AA seq
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MLRQVLHEGLRTSFHKLGHFVANHPVFFASAPVLISILLGASFSRYRIEENVEYLLAPKH
SLAKIEGNLVDSLFPVNRSKHTLYSDLQTPGRYGRVIVTSRRGSVLDPHHVNSVLKLHNT
ITQIQVPMLGFNYTFAHLCLLDDSKSCIVDDILRVLEEMRSARASNRSVLPLRYPITKLK
DGREAYIGHQLGGVLAGGGRDGVRSARALQLTYYLQAASPLNEVVAATWELLFCKELEDF
GKAHPELSLYPFTSSSLQRDFQRTSRVSERPLLFSLAVCLSLAMLCCSMRDCVRTKPWLG
LLALVTVSLATLTSAGIFNLTGGKYNSTYLGIPFVMLGHGLFGTFEMLSSWRRTREDQHV
KERVAAVFSDCMLPFTASTALHVVTFGIGASPFTNIEAVRLFCRNACISVLFNYLYILTF
YGSNLVFAGYLENNYRHSLFCRRVPKPELLQQKPAWYRFLMYTHYNEEATEAGPLRAYES
HLLVAFMKRYYCDWITNTYVKPFVVLFYLVYVSFALMGYLQVSEGSDLSNVVATETSTIA
YTRAQQRYFSSYSPVIGFYIYESIEYWNTSVQEDLLEYTKGFERISWFESYLNYLHGLNI
TTSLSRSNFTEHLRSGFLRQPQYVHFSDDIIFAKRADGEFDVVASRMFLVAKTTENKREE
MSILLDTLRKLSLTSRVKFIIFNPSFVYMDRYASSVGAPLKNSCIAALFLLFFSTFLAAD
PLVNAWLTVTVASVEFGLVGFMTLWRVELDCVSVLCLIYGVNYAVDSSAPLVSAFALGRE
STRTRWVKLALERHGVPALQSYLCYGAALLPLAAVPSNLTRTLFRCLFLTAIITAFHCLA
ILPVLLTFLPPSKKKCRERKNATENREEIECVEMVDSTRVVDQITTV
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgacaagtgttgcacgaagggctcaggacgtcattccacaaactgggccacttt
gtcgccaatcacccggtgtttttcgcctccgcgcccgtgctgatctccatcctgctgggc
gcgagtttcagcagataccgcatagaagaaaacgtggagtacctgttagcccccaaacac
agcctggcgaagatcgagggaaacttggtggatagtttgttccccgtcaaccggtccaaa
cacaccctctactcggacttgcaaacacctgggagatatggccgggtcatcgtgacttcg
cgcagggggagcgtgttggaccctcaccacgtcaactcagtcctaaagctacacaacaca
atcactcagatccaagttcctatgctgggattcaactacacctttgcccacctctgcctg
ttggatgacagcaagagctgcatcgtagacgacatcctgcgggttctggaagagatgaga
tcagcccgggcgtccaaccgttctgtactccctctgcgttatcccatcaccaaactcaaa
gatgggcgggaggcctacatcggacaccaactgggcggagtcctggcaggcggaggaaga
gatggggtgcgttctgctcgagcccttcaactcacatactacctgcaagctgccagccca
ctcaacgaagtggtggcggccacctgggagctgctgttctgcaaggagttggaggacttt
ggaaaggctcatccagagcttagcctatacccattcacttcctcttctcttcagagggac
ttccaaaggaccagtcgggtatcagaacggccgctgctctttagcctggctgtgtgcctc
tcgctggccatgctgtgctgctcaatgcgagactgtgtgcgtacaaagccatggctgggt
cttctggctctggtgactgtcagcctcgctacactcacctctgcaggcattttcaacctc
acaggagggaaatacaattcaacatacctgggcatcccgtttgtcatgttaggtcatggc
ttgttcggcacattcgagatgttgtcgtcttggcgacgtacccgcgaggaccagcatgtg
aaggagcgggtcgctgctgtgttctctgactgtatgctgcccttcacagctagcacggcc
ttgcacgtggtcaccttcggcattggagccagtccattcacaaacattgaggctgtgcgt
ctcttctgtcggaacgcctgcatctcagtcctcttcaactacctctacatcctcaccttc
tacggctccaacctggtgttcgccggctacctggaaaacaactaccgtcatagtttattc
tgcaggcgtgtaccaaaacctgagttgctgcagcagaagccggcgtggtaccgctttctc
atgtacacgcattacaacgaggaggccacggaagcaggaccactccgtgcttacgagagt
cacctgctggttgcctttatgaagcggtactactgtgactggatcaccaacacctacgtc
aaaccattcgtggttctgttctacttggtttatgtttccttcgctctcatgggctacctt
caggtcagtgaaggatcagaccttagtaatgtggttgcgacagaaacaagcactattgca
tacacccgtgcacagcagcggtatttcagcagttacagccccgtgattggtttctacatc
tacgagtccattgagtactggaacacaagcgtccaagaggatcttctggaatacaccaaa
ggttttgaacgcatctcctggtttgagagttacctcaactaccttcacgggctgaatatc
accacaagcctgtcacgcagcaacttcacagaacacttgcggtctgggtttttgcgccag
ccacaatatgtacacttctcggacgatatcatctttgccaaacgtgccgatggggaattt
gatgtcgtagcctcccgtatgtttctagtggccaagacgacggaaaacaaacgagaggag
atgtctatcctgttggacacgctaaggaagctgtcactgacctccagggtgaagttcatt
atctttaatccatcctttgtgtatatggaccgctatgcttcatctgttggagcaccgctg
aagaactcatgcatcgctgcactctttctgctcttcttttccaccttcttggcagctgac
ccactggtgaatgcctggttgactgtgacagtagcctctgttgagttcgggctggtgggt
ttcatgaccctgtggcgggtcgagttggactgcgtctctgtgctgtgtctgatctacggc
gtgaactatgctgtagactccagcgctccgctggtgtctgcgtttgccctaggccgggaa
tccactcgtacgcgctgggtgaaactagctctggagagacacggagttcccgcccttcag
agctacttgtgttatggggctgctctgctccctctcgcggccgtgccctcgaacctcact
cgtacgctcttcaggtgcctctttctcaccgccatcatcaccgccttccactgtttggcc
attcttcctgtcctgctcaccttcttgcctccctctaagaaaaagtgtcgggagagaaag
aatgcgacagaaaaccgggaagaaattgagtgtgtggagatggtggacagcactcgtgtg
gttgatcagattaccactgtctga
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