KEGG   Garra rufa (doctor fish): 141300641
Entry
141300641         CDS       T11039                                 
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:grf03037]
    141300641 (ift140)
Cilium and associated proteins [BR:grf03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   141300641 (ift140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_CDC20-Fz WD40_Prp19 WD40 ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 TPR_COPA_B TPR_IFT80_172 WDR55 TPR_GEMI5 Beta-prop_WDR75_1st tRNA_int_end_N2 Beta-prop_TEP1_2nd Clathrin Consortin_N Beta-prop_WDR35_TULP_N Beta-prop_ELP1_2nd CFAP43_N WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 141300641
NCBI-ProteinID: XP_073687036
LinkDB
Position
24:35184319..35224674
AA seq 1446 aa
MAVYFDHRVEAPDSSGAAVLISWHSSVCVLAVGSVNASTGGCVDLYLQQGEHVELCHVER
GFSPSLLQWHPTKPLLAVGWETGETMLLSHPSGEHTPLPNNTHTTCITVLEWSSNGSRLV
TGDQAGVMVLWRVDARGKLQGSPLIKHDYSKPLTCCIFRPPLPTEDVAMLARAAVSGDEN
ALDMFNWKKSNKGGAFALGSQEGLVFYISTADGSVFSVDEQARSVPLLSVESAVQKMWYS
KRRAVLAVVTDSLLLSQFSLGPEGIAQEISKVKLSGRGGQHADIAWTENGLLITASGEQH
IRLWDVELDDHYALTLDESLGFEKGELLNCVSFSTSKQVLAAGTSKGRVALWHMVTVSDQ
KGDTKIHWKLQTPAEVEGNISQLQWGSSSHLLAVCSSSCVVILSEHVMCSHYSQQMAAVQ
LTPTQLSLANFNTNTHITFHTDTHIRAVQVTKDLVAVWNGKYITVYEPSGQTLHSTGSFQ
CESLALAVHEGNIYTVEPNRVQIRTPQGTVKQLLVFSEAEGNPTLLSVCGSYLAVGTDTC
HVRVFNLTRREAKAIGVTKNLSELIPDLGALRSVKCNASGSQLSILITQVNGRPDNKVYF
YDIELDTLSHFDFFTGRPESSLAQSEDNERSQCEGELAARCPVSQFWDENESRMFVCETV
PVNSDLHSSSQSQIEKEDVLVVTFFVTQEHGLLLQDSQPKPATLLSLLALDTPYYYYICK
LGEDRDQAVSTPAATPQVPSSPQMVVRRALRDFVGLESCEKQTRDAMLNFSFYLTIGDMD
EAFKAIKLIKSEAVWENMARMCVKSRRLDVARVCLGNMGNARAARALRDAEKEPEVEAQV
AVLATQLGMLEDAERLYKSCGRFDLLNKFYQAAGQWQQAVEMAETHDRIHLRTTYYSYAK
HLEAMGDKNLALVYFEKSDTHRFEVPRMLMEDNLSLEIYINKMKDKDLYKWWGHYLESQS
DMEAALHYYDLAQDYLSQVRVHCYLGNIQKASEIANETGNRAASYHVARQYEGQDEISQS
VHFYTRAQAYNNAIRLCKENNLDEQLMNLALLSNPEDMMDTAMYYEEKGTHMDRAVMLYH
KAGHVSKALELAFATEQFGALQLIAEDLNENSDPALLARCSDFFIKHAQYQKAVELLVAA
KKYHEALQLCLNQSLTITEDLAESLTVPKDSSHLSEAGRKELLEKIADCCMRQGNYHLAT
KKYTQAGNKIKAMRALLKSGDTEKIVFFAGVSRQKEIYVMAANYLQSLDWRNDPEIMKNI
IGFYTKGRALDLLAGFYEACAEVEIDDYQNYEKAYGALTEACKCLTKAKGRSGDEADSKL
LILTHRLGLVKKFLQARRMHEEDPVEAVRVCESLLEEKDLDPAVRVGDVYGFLVEHYCHH
GNFQQAWSKIEDLRSSRPNINLSLYVSQTSLEALQNAAGVRLLYRDTNTHAAEDDEEVEE
DENINH
NT seq 4341 nt   +upstreamnt  +downstreamnt
atggctgtgtattttgatcatcgtgttgaggctcctgacagcagtggagcagccgtcttg
atctcatggcattccagtgtgtgtgtgctggccgtgggctctgtgaacgcctctaccggg
ggctgcgtggatctttacctgcaacagggagagcatgttgagctgtgtcatgtggagcgg
ggattcagcccctcgttgttgcagtggcacccgactaaacctctgctggcggtgggatgg
gagacgggcgagaccatgctcctctcacacccatccggtgaacacacacctctgcccaac
aacacacacaccacctgcatcacagtgctggagtggagcagtaatggcagccgactggtc
acgggagatcaggcaggtgtaatggtgctgtggagggtggatgctagaggaaaactgcag
ggatctcctctgataaaacatgactacagtaaaccactgacgtgttgcatattcagacct
ccactgcctactgaggatgtggcaatgctggctcgtgctgccgtcagcggggatgaaaac
gctctggacatgtttaactggaagaagagcaataaaggaggagcgtttgcactgggatca
caggaaggactggtgttctacatcagtacagctgatgggagtgtgttcagtgtggatgag
caggcgcgtagtgtgccgttactgtctgttgagagtgcagtacagaagatgtggtactcc
aagaggagggccgtccttgccgtggtaacagactcactgctgctctctcagttcagtctt
ggaccggaaggaattgctcaggagatcagtaaggttaagctcagtggcagaggtgggcag
catgcagacattgcgtggacagaaaacggtttgctcatcaccgcctcaggagaacaacac
atcaggttgtgggatgtggagctggatgatcattatgctctaacactggatgagtctctg
ggctttgagaaaggagaactgctcaactgtgtttcctttagcacttctaaacaagttctt
gcagcaggtactagcaaaggccgtgttgctctgtggcacatggtgactgtgagtgatcag
aaaggagacacgaaaattcactggaaactccaaacaccagcagaagttgaaggaaacatc
tcacagctacaatggggttcgagctctcatctgttggccgtctgcagcagcagctgtgtg
gtgatcttgtcagagcatgtgatgtgttctcattatagccagcagatggcagcagtgcag
ctcacgccaacacagctcagcctggccaacttcaacaccaacacacacatcacctttcac
acagacacacacatcagagccgtgcaagtcaccaaagatttggttgcggtgtggaatgga
aaatatatcactgtgtacgagccatcaggacaaaccctacatagcacaggttctttccag
tgtgagtctcttgctcttgcggttcatgaaggaaacatttacactgttgaaccaaaccgc
gtccagatccgcacaccacagggcaccgtgaagcagttgttggtgttttctgaagcggaa
ggaaacccaacactgctgagtgtgtgtggatcttacctggctgtgggaacagatacgtgt
cacgtcagagtgtttaacctcacgcgcagggaggccaaagccataggtgtcacaaagaac
ctctctgagctcattcctgacctgggcgctctgagatcagtcaaatgcaacgccagcggc
agtcagttgagcatcctcataacacaggtgaacggaaggccggataacaaagtatatttc
tatgacattgagctggacacgttgtcacacttcgacttcttcacagggaggccggagagc
agtctcgcacagtccgaggacaatgaaagatctcagtgtgagggggagttggctgcccgc
tgcccagtttctcagttctgggacgagaatgagtcacgtatgtttgtgtgtgaaactgtt
cccgtgaactctgacctccacagtagcagccaatcacaaatagagaaggaagacgtgttg
gtggtgacattctttgtgactcaagaacacggtctcctcttgcaggactcacagcctaaa
ccagctacgctgctctctctgctggctttagatacaccgtattactattatatttgcaag
ctgggtgaggatagagatcaggcggtctcgactcccgccgccacaccccaggtgccttcg
tctcctcagatggtggtacggcgagccctccgagactttgtggggttggagagctgcgag
aagcagacccgagatgccatgctgaacttcagcttctacctcactataggggacatggat
gaagcatttaaagccatcaaactcatcaagagtgaagcggtgtgggagaacatggcacgg
atgtgtgtgaagagtcgtcgtctggacgtggcacgcgtgtgtctggggaacatgggtaat
gcacgggccgctcgtgctctcagggatgctgaaaaagagccggaggtggaggcacaggtg
gccgtactggctacacagctgggcatgctggaggatgcagagcgtttgtataagtcgtgt
gggaggtttgatttattgaacaagttttatcaggcggcaggtcagtggcagcaggcggtg
gagatggcggagacgcacgaccgcattcacctccgaaccacttactatagctacgccaaa
cacctggaagccatgggagacaagaacctagcgctggtgtattttgaaaagtcagataca
catcggtttgaagttcccagaatgctgatggaagataatctttctctggaaatttacatc
aataaaatgaaggacaaggatctgtataaatggtggggtcattatctggagagccaatca
gacatggaggccgcgctgcattactacgatctcgctcaggactatctatctcaagtgcgc
gtgcactgttatctaggaaacattcaaaaggcaagtgaaatagccaatgagacgggcaac
agagcagcatcttaccatgttgcacggcagtacgagggacaggatgaaatcagccaatcg
gtgcacttctacacacgtgcacaagcctataataacgccatccgactgtgtaaagagaat
aacttagatgagcaacttatgaatctggccttgcttagcaatccagaagacatgatggac
acagcgatgtattatgaagagaaaggaacgcatatggacagagcagtcatgctttatcac
aaggcaggtcatgtctctaaggctttggagctagctttcgccacagagcagtttggagct
ctacagctgatcgcagaggacctgaatgaaaacagtgaccctgccttactagcacgctgc
tctgatttcttcataaaacatgctcagtatcaaaaagctgtggagttgctggtggctgcc
aaaaagtaccacgaggcgctccagttgtgtttgaaccagagtttgaccatcacagaagat
ctagccgaaagtctgacggtgccaaaagactcgtcccatctgtcagaggccgggcgaaag
gagctgctggagaaaatcgcagactgctgcatgcggcagggcaactatcacttagccacg
aagaaatacacacaagctggaaacaagatcaaggcaatgcgagccctgttgaaatccggc
gatacagagaaaatagtgtttttcgcaggtgtttccagacagaaggaaatttacgtaatg
gcagccaactacctgcagtcactggactggagaaacgacccggaaatcatgaagaacatc
atcggcttctacacaaaaggacgtgcgctcgatctgctcgctggcttctatgaagcctgt
gctgaggtggaaattgacgattatcagaattatgagaaggcgtatggtgctctgacagag
gcgtgcaagtgtctgactaaagcaaagggtcgcagtggagacgaggctgacagcaaactt
ctcatactgacacatagactcggcctcgtcaagaaattccttcaggcgcgaaggatgcac
gaagaggatccagtggaagcggtgcgtgtgtgcgagtctctgctggaagagaaggatctg
gaccctgcggtgcgtgttggagatgtgtatgggttcctggtggagcactactgccatcat
ggcaacttccagcaggcttggagtaaaatcgaggacttgagatcatcacgtcccaacata
aacttgagtttgtacgtgagtcaaaccagtctggaggctttacagaacgctgctggagtc
cgtctgctctacagagatacgaacacccatgctgccgaggatgatgaagaggtggaggaa
gatgagaacatcaatcattga

DBGET integrated database retrieval system