Garra rufa (doctor fish): 141300688
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Entry
141300688 CDS
T11039
Symbol
pks1
Name
(RefSeq) uncharacterized protein pks1
Organism
grf Garra rufa (doctor fish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
PS-DH
KAsynt_C_assoc
adh_short
PP-binding
ACP_SdgA_C
PKS_DH_N
CurL-like_PKS_C
Thiolase_N
ADH_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
141300688
NCBI-ProteinID:
XP_073687087
LinkDB
All DBs
Position
24:30611480..30619047
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AA seq
2092 aa
AA seq
DB search
MDEDIAIIGIGCNFPGGEGVESFWKVLVEGKNCVEQIPDERFDTSEWFHLDESKPGKTQT
TKAALIEGFNEFDHKFFGISEAEAEYMDPQQKLLLQCAYRALEDAGIPLEKASGSRTGVY
IGLMNRDYETLLNNSPSTITHYNGTGTAMSIAANRISYVFNLTGPSFAIDSACSSSLVAL
HSACQAIRQGDCEMALCGGVSCILEPRVFVALSKAKMISSEGTSKPFCRTADGYGRGEGC
GIVLLKPLKKALEDFDNIWGVVNKTAVNQDGHTVTPITKPSMTQQEALLRMIYSSENYLA
NVQYVEAHGTGTPAGDPVEARSISKIIAKARSSISGPLFIGSVKSNIGHTESAAGVAGLI
KILLMMKHETIVPSVFYSAENSSIDAKALNLKIPTRAEKWLYSGSRIRMAGLNSFGFGGT
NAHAIISEYVQATVSDCHTLQPLKLLPLSAATDQSLQLCIADTFQRISADETADLQALAY
TAACRRSHIMNKFRKVFGASSMSELKSQLKSSINKKLAPTKQDLKLVFVFCGNGVTYRGM
CKQLLREEPAFRDKVKEVENYFQKLKCTSILQKIASSYDNEDISKPNVVQPLLFAIQVAI
VHLLRNWGIRPDIVLGHSVGEVAAAYCSGLLSLEDAVKVVYHRSVLQTKVMGGRMLVVGN
VPVPDVLEILPAYTGKICLAAVNSPMSCVLSGDKEAVNNVHQKLQSLFKGKNLFLHVLDV
PAAYHSHMMDPILGQIKDNIGQLTLNEMECELFSTVTGKMCCQGDFVTGEYWARNIRKPV
AFEQAIKSVSNHTRNTVFVEIGPRRALQRNIMEILGNDTTVLPSVHPDKDHETMFTAVSK
LFELGVNVKWDEFYKGFETELVAFPRYQFECQKNEVYFEDVRRGNEAVSRSPHPLISPSK
RDGKVIKCNLSEATTSYLWEHKNNGISIAPGALYVELALASIMETAVPKRPLNSFQLTIN
FESLLVLTKNCPPLKITIGTSKDTATFQVQSSVTVHASGTISIEGGPAMIEQKTIHLNTV
LKRCPSVIETKDVYNTLEDIGFEYGPNFKQLGDIHYGQGFKEAVTSLRIPEGVLNHLYEY
CLHPVVLDYFLQMSSVLVLVSSTVRPGFPSAIGSMVISAPPCKEMFMYMRLTKEMPDYFE
VCGCFTNKDGHVLIELRDVRINFLGRHAQIRESCFFHNQKVAIHADSNSLSRIKALVFED
TLGIAKGLKPYLHPKSVFVPLPSALQVSELPLNSLCSAADMELDTILFIWGVQNISHLQS
EVILESLVDSCELYRQVVLSLRSRSCACPIRVITYRSADGTVESISPGFVLSGMTRACAA
ELSGISFQLIDLSSVSREDIEALAHVLNSCKTQECPEVFISKGKVYSAVVTHTPITTIEE
PKAESKTLQPRDFTLQTTNAYRMTSISALPSTSSVHTIERKSIEVQLSKVCMHSSDYFPV
STSELTFGQTMYWNEHTTQNHSLLALDFSGIITAVGKDVNKLKVGDNVVCCYPVKATSKV
VLPQDVCFKIKRVPFLKDIPCVSYIVLTWEILQCALPKTKPQQSLGIFSTVHDSALVNLL
TLIASKSGWSVFTESETSGLVQNPKQCWLLVILPPYDCSLLTEIVRVANASHVIAVRGVH
EPWYSTINVIQRESERTCFQTLEMSKIFQKSRLKAQGARLQKWLKGMHLHKVCPLIQSST
FQMVLPEGMPSQSPEHSESYFSARTLDLIALASDNSTSKMSTIPLLPRTKQLFSKKGVYI
VTGGLSGLGFETVKFIAHRGGGCIATLSRSAPSQKVQEDINNLRRRYGVRIHTLPCDVSV
SEQVIESITVIEKYFSDCPVRGVFHSAALLHDGLLETLNRSLFRKVLQPKICGALNLHFA
TLHSQTLDYFVCYSSISSFIGNAAQANYAAANSFLDAFCHFRRNIGLAGQSINWGPLKLG
LLMDKDNFQKFLETKGLMIMDVSEIHEALEHCLLDNYPQQVVCKFNFRNLKNHVLSQNAS
LKFRLSALVEKGLKNKVVEDSRINVQSSVDDCVRGILTEICSVDTDDLSEETALTALGID
SMLAMTLQNRLFQEIGVNIPLVALLDPNSTLSSLNEFIKQSTDEDCEISVKL
NT seq
6279 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggatattgctataataggaattggatgcaacttcccaggaggtgagggtgtt
gaaagtttctggaaagttcttgtggagggaaagaactgtgtggaacagattccagatgaa
agatttgacacttcagagtggtttcatcttgatgaaagcaaaccaggaaaaacgcagacg
accaaagctgcactcattgaagggttcaatgagttcgatcacaagttctttggcatcagc
gaggctgaagctgaatacatggaccctcagcagaaactgctgctgcagtgtgcataccga
gctctagaggatgctgggatacccttggaaaaagctagtgggagcagaacaggggtttac
ataggtcttatgaacagagactatgagacacttttgaacaatagtcccagcactataacc
cactataatggcaccggaacagctatgagtatagctgccaacagaatttcctatgtcttc
aatctgactggaccttcatttgccattgacagtgcatgttcttcatcccttgtcgcccta
cattctgcgtgtcaggccatcagacaaggggactgtgaaatggctttgtgtggaggggtc
agctgcatccttgaacctcgagtctttgtggccctcagtaaagcaaagatgatctcatct
gagggcacaagcaagccattctgccgtacagcagatggctatggtagaggggagggatgt
ggtatagtcctactaaagcctttgaaaaaggctcttgaggactttgataatatttggggc
gttgtgaacaagactgcagtaaatcaagatggccacacagtcacaccaattaccaaacct
tccatgacccagcaggaggctctcctgcgcatgatctactcctctgagaattatctagca
aatgtccagtatgtagaagctcatgggacaggaacaccagccggagatccggttgaagca
agaagcatctcaaaaatcatcgctaaagcaagatcttcaatctcagggcctctatttatt
ggctctgttaagagtaacatcggacatacagaatctgcagcaggggtggcaggactcata
aagattctgttaatgatgaaacacgaaaccattgtcccctctgtgttctactcagcagaa
aattccagcatagatgctaaagcactcaatcttaaaatccccaccagagctgaaaaatgg
ctttactctggatccaggataaggatggctggattaaacagctttgggttcggtggcacc
aatgcccatgccatcatcagtgagtatgttcaagcaacagtctctgactgccacactctt
caacctctaaaactgcttccactgtctgcagccacagatcagtctctacagttatgcata
gctgacacgtttcagaggatttcagcagatgagacggctgatttgcaagctcttgcttat
acagccgcttgcagaagaagccacattatgaacaaatttagaaaggtctttggtgcatcg
tctatgtcagaattaaaatcacaactcaaatctagcattaacaagaaattagctccaaca
aagcaggacctaaagttagtttttgtattttgtgggaatggtgttacttataggggaatg
tgtaagcaactactaagagaagaacctgcttttagggacaaggtcaaagaggtggaaaac
tacttccagaagctcaaatgcaccagtattttgcagaagattgcaagcagctatgacaat
gaagatatctccaaaccaaacgttgtacagccacttctctttgcaatccaagttgcaatt
gttcatcttcttaggaactggggcatccgaccggatattgttcttggacactctgtggga
gaggttgctgcagcttattgctcaggcctactgtctctcgaggatgcggtgaaagttgtc
taccatcgcagtgtgctgcagaccaaagtaatgggtggaagaatgctggttgttggaaac
gttcctgttccagatgttctggaaattctccctgcatacacaggaaagatttgcctagct
gctgtgaacagtcctatgtcatgtgtgctgtcaggtgataaagaggcagttaataatgtg
caccagaagcttcagtctttgttcaagggcaagaacctgttccttcatgtcttggatgtt
cccgctgcctaccatagtcacatgatggatcctatactaggccaaatcaaagacaacatt
ggacagctaactctgaatgaaatggagtgtgaacttttttccacagtaacaggtaagatg
tgttgtcaaggggactttgtaacaggcgaatactgggcaagaaacattcgaaagcctgtt
gcatttgaacaagcaattaaatcagtttccaaccacacaaggaacacagtctttgtggaa
attggtccaagacgggctctgcaaaggaacatcatggagattctgggaaatgacaccaca
gtgcttccatcagttcatccagataaagaccacgagacaatgttcacagctgtatcaaaa
ctgtttgaacttggagtcaatgtgaagtgggacgagttctacaaagggtttgaaacagag
cttgttgctttcccaaggtatcaatttgagtgtcaaaagaatgaggtatactttgaggac
gtaagacggggaaatgaagcagtctctcgcagtccacatccactgataagtccaagtaaa
cgtgatgggaaagtaatcaagtgcaacctgtcagaagctacaacctcttacctttgggaa
cacaagaacaatgggatctccattgccccaggggcattgtatgttgaattggctttggca
tccataatggaaactgctgttccaaaaagacctctcaactcattccagctcacaatcaac
tttgaaagtttacttgttctaactaagaactgccctcctctcaaaatcacaattgggaca
tccaaggacacagccacatttcaggttcagtcctctgttaccgtgcatgcatcaggcacc
atcagcattgaaggtggaccagctatgattgaacagaaaaccattcacctcaacactgtt
ttgaagagatgtccatcagtcattgaaacaaaggatgtgtacaacactctcgaggacata
ggatttgagtatgggcccaacttcaaacaacttggtgatattcattacggacaaggattt
aaggaagcagtgaccagtctcaggattccagaaggagtactaaaccatctgtatgagtat
tgcttgcacccagtggtcctagactacttcttgcaaatgtcctcagttttagtattagtc
tctagcacagtccggcctggatttccctctgcaattgggagtatggtgatatctgcacct
ccctgtaaagagatgttcatgtatatgagattgaccaaagaaatgccagactactttgag
gtttgtggatgtttcactaacaaagatggtcatgtgttgattgagctaagagacgtcaga
atcaattttctgggaagacatgcacagatcagggaatcatgcttctttcataaccagaag
gttgccattcatgccgacagcaattccctcagtagaatcaaggctttggtctttgaagac
accttgggtattgctaaaggtttgaagccgtatttgcacccaaaatctgtgtttgttcct
ctaccttcagccttgcaggtctcagaattaccgttgaactctctttgcagtgcagcagac
atggaactggacacaatcctgtttatctggggagttcagaatattagccacctccaatct
gaagtcattcttgagtccttggtggacagctgtgaactttaccgccaggttgttttgtct
ttacgaagccggagctgtgcatgccccattcgagtcattacgtacaggtctgcggatggg
acagttgaaagcataagtcctggatttgtgttatcaggcatgacaagggcatgtgctgca
gagttgtcagggatctcattccagctcattgacctttcctcagtgtcaagagaggatata
gaggcactggctcatgtgcttaactcatgtaagacccaagagtgcccagaagtctttatc
agtaaaggaaaggtttactctgctgtggtaactcatactcctatcaccacaattgaagaa
ccgaaggctgaatcaaaaaccctacagcccagggatttcactttgcagacaactaatgcc
tacaggatgaccagcatatcagccttgccttcaacaagttcagtccacacaattgaaagg
aaaagcattgaggttcagcttagtaaggtatgcatgcactcatctgattattttccagtt
agtacttcagaactaacgtttggtcagacgatgtactggaacgagcacacaacccagaac
cacagtctcctagcactcgacttcagcgggataattacggctgtgggaaaagatgtcaac
aaacttaaagtaggagacaatgttgtgtgttgttacccagtgaaagcaacttccaaagtt
gtcctcccccaagatgtgtgttttaaaataaaaagggttccattcctaaaggacattccc
tgtgtttcatacattgtcctgacctgggagatactccagtgtgcattacccaagaccaaa
ccacagcaaagtttgggcatcttctctactgttcatgactccgctctagtcaacttattg
acgctcatagcaagtaaatcaggctggagtgtttttacagagagtgagacaagtggatta
gtccaaaatccgaagcagtgttggcttcttgtgattcttccaccatatgattgctcactt
ctgacagagattgtcagagttgccaatgcaagtcacgtcattgcagtacgtggtgtccat
gagccatggtactcgacaatcaatgtaattcagagggagagtgagagaacttgcttccag
actcttgagatgtccaaaatcttccagaaatcacgacttaaggcacaaggagctcgacta
cagaagtggctaaagggaatgcacttgcacaaagtgtgccctttaatacaaagcagcact
tttcagatggtgctccctgaaggcatgccttctcagtctccagagcattctgaatcttat
ttcagtgcaagaactctagacttgatagctctggctagtgacaattctacgagcaagatg
tcaaccatccctttgcttccaagaacaaagcagctgttctcaaagaaaggtgtgtacata
gttacaggtggtctttctggtttgggatttgaaactgtaaagttcattgcccacaggggt
ggaggatgcattgccactctctcaaggagtgcaccttctcaaaaggtacaagaggacata
aacaatctccgaaggagatacggagtaagaattcatactcttccgtgtgatgtctctgta
tcagagcaggtgattgaatccattactgtgattgaaaaatatttttctgattgtccagtc
aggggggtgttccacagtgccgctcttctacacgatggactactggaaactctcaatagg
tctcttttccgaaaagtcctgcaacctaaaatctgtggtgctcttaatcttcactttgcc
actctgcacagccaaacactcgattactttgtgtgctattcctcaatctcctcttttatt
ggaaatgctgcacaagccaactacgcagcagctaattcctttctggatgctttttgtcac
ttccgacgtaatattggactagcaggacagtcaatcaattggggaccgcttaaactaggc
ctgctaatggacaaagacaattttcagaagttccttgaaacaaaagggctaatgatcatg
gacgtatcagagattcacgaagcactggagcactgcctgttagataactatccccagcag
gtggtttgcaaattcaatttcaggaacctgaagaaccacgtcctctctcagaatgcatct
ctcaagtttcgcctttctgctttagtggagaaaggactgaaaaacaaggttgttgaggac
tccaggataaatgttcagtcatcggtagatgactgtgttagagggattctgactgaaatt
tgcagtgtggatactgatgatctcagtgaagaaactgcgcttactgcactaggaattgac
tcgatgttggccatgacgctgcaaaatcgcttgtttcaagaaataggtgtgaatattccc
cttgttgctttacttgatccaaacagtacattgtcctcattgaatgaattcataaaacag
agcacggatgaggactgtgagatttctgtgaagctgtaa
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integrated database retrieval system