Garra rufa (doctor fish): 141300742
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Entry
141300742 CDS
T11039
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141300742 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
grf04030
]
141300742 (tmtopsb)
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141300742 (tmtopsb)
G protein-coupled receptors [BR:
grf04030
]
Rhodopsin family
Vision
Opsin
141300742 (tmtopsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF2975
7TM_GPCR_Srw
DUF2189
Motif
Other DBs
NCBI-GeneID:
141300742
NCBI-ProteinID:
XP_073687141
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All DBs
Position
24:25959872..26014828
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AA seq
400 aa
AA seq
DB search
MIESNVSLSCAWCAGGGDGTGAHLDENHSEHSLSPTGHLVVAVCLGFIGTLGFLNNTLVL
ILFCRYKVLRSPMNCLLVSISVSDLLVCVLGTPFSFAASTQGRWLIGRAGCVWYGFINSF
LGVVSLISLAVLSYERYCTMMGATQADSTNYRKVAMGIAFSWIYSMIWTLPPLFGWSCYG
PEGPGTTCSVNWAARTANNVSYIVCLFIFCLILPFMVIVYSYGRLLQAITQMSRINTAVS
RKREQRVLFMVVMMVVCYLLCWLPYGVMALVATFGRPGLVTPAASIIPSLLAKSSTVINP
IIYIFMNKQFCRCFHALIMCTTPERGSSFKNSSKVTKTLRTVRRANGQNVTFAVAPAGHP
AIFAPNSSGQKSSSDGEKPSPAVGQGTNRPVVSLVAYYNG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtccaacgtgagtctgagttgcgcgtggtgcgctggaggaggtgacgggact
ggcgcgcacttggatgagaatcactcagaacacagtctgagtccaaccggacacctggtg
gtcgcggtgtgccttggattcatcggaactttggggtttctcaacaacacgctcgttctc
atcctgttctgtcgctacaaagtgctgcgctcgcccatgaactgtcttctggtgagcatc
tctgtcagtgatctgctagtgtgcgtcctgggcacgccgttcagcttcgccgccagtacg
cagggccggtggctcatcggacgcgcgggatgcgtgtggtacggcttcatcaattcattc
ctgggcgttgtttctctaatctccctggcggtgctctcttacgagcgctactgcaccatg
atgggggccacgcaggccgactctaccaattacagaaaggtggccatgggtattgccttc
tcctggatatattccatgatttggactcttccgccactgtttggatggagctgctacggt
ccggagggtcccggcactacctgcagcgtcaattgggccgccaggacggccaacaacgtg
tcttacatcgtctgtctgtttatcttctgccttattctcccttttatggtgattgtctac
agctatggcagactcctacaggctatcacacagatgagcaggatcaatacggcggtgagt
cgtaagcgggagcagcgcgttctcttcatggtggtcatgatggtggtgtgttatctgctg
tgctggctgccctacggggttatggccctggtggccacgttcggacgtcccggcctcgtc
acaccagcggcaagcatcattccttctctgttagccaagagcagcacagtcataaacccc
atcatctacatcttcatgaacaaacagttttgcagatgtttccatgcgctcatcatgtgc
accaccccagagagaggctccagcttcaaaaactcctccaaagtcaccaaaactctcagg
acagtgcgacgcgccaacggccagaatgtgaccttcgccgtggccccagctggccatcct
gctatctttgctcctaacagcagcgggcagaaaagttcctcagatggtgagaaaccatct
cctgctgtgggccagggcaccaacagacctgttgtctctcttgtggcctattacaatggt
taa
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