Garra rufa (doctor fish): 141300808
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Entry
141300808 CDS
T11039
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
grf04054
]
141300808
Pattern recognition receptors [BR:
grf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
141300808
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
SpoU_sub_bind
LRR_8
AAA_16
Motif
Other DBs
NCBI-GeneID:
141300808
NCBI-ProteinID:
XP_073687205
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Position
24:34773532..34786022
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AA seq
1086 aa
AA seq
DB search
MVNVVHQMRKADLLSAQDAGLIQEMGSLKDKVQLLVEFLSVTDPNGAALQAYLQSSHLTE
YNLITVHDSVVRPYKDALIHRLKEDENSLAQVATNSNSTLLLIECVSDLQQREHDLVQVS
VNRGAGPLHGRVLGLDKLIASLTRVSTAPRVTLTVGVAGSGKSRSVRRFIHLWSSGQIYP
EISLTIPIACWELSSFDRLSVERLLRLYVPYDNVDLIIFNESCKVLLIFDGLEEFRQSLD
FADAPPNSDPRREIPVSDLIANIVRGNLLPGATLWLLSRPGTGAKVPAGLVDRVTEAPPL
SRMQIKDYINHCITNTLDAYSLSLDSLSSQTNTPEDVSSHVWTYLNSQKPLLILSSVPTV
CHIIVTTLSRLIKLDSEATPLPRTLTEVYAHYCWPHLSGSDAPSGGIRKSLSTLGRLAFY
SLLRRRYTFSEAELRTYGVDVPPQSGTLGFRILQRRQSWSSDSVAWQFSHTSIQEFLGAL
FYYISSRRGMFDLFSESGVSWPRIGFHSHYRAALQKTNQSDVAAQGNLDLFMRFLSGLLS
PAAATLLGGSLSVGHEEQVTQRTTATTLLQNAVTATGGDSVSMRSVTMVTCLAELQQVEL
LRSVEDDLVNCSLRGKLKGGVCAVLAYLLQVSDACTEETQLSNCLDSASLKRLLPQLLYC
SKLRMENNEFKEGTMELLGSLLSAKECHIQMLSLADNSISSKGIKPLSRALLVNRTLTTL
DLRGNNIGAKGAKTLCEALKLNQFLVSVNLQNNHIEDEGARALAEVLQSNRKLTTLNVQK
NGIGPEGVKKIGEALTKNQTLQDLNVSSNHLGDLGTVALAQALMVNHVLHTLSLQSNSVS
DRGIKALSHALQSNRGLSCLNLRENSIGVSGAKDIAKALKVNTCLRELDLTANLLHDEGV
TAIAEAMRVNRAITSLHLQWNFMKAGAAKALAQSLMSNTCIQLLDLQENALGDNGIIALA
CALRSNSSLNVLYLQGVSAAKSGAVALADALVVNESLHTLDLRGNSIGMEGAKAFSSALK
NNRSLRSLNLQENSLGMDGAIFIATALRGNHQLTYINLQGNGIGESGAKVVSDAIKAGAP
DCVVDI
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtggtccatcaaatgagaaaggcagacctgctcagtgcacaggatgcaggg
ctcatccaggaaatggggtctttgaaagataaagtgcaattattggttgagttcctgtct
gtgactgatccaaatggcgctgccctacaggcttatcttcaaagttcacacctgaccgag
tacaacctcataactgtacatgactctgtggttcgaccatataaagacgctctcattcac
cgactcaaagaggatgaaaattcactagcgcaagtcgccactaactcgaattccacttta
ctcctcatcgagtgcgtatctgaccttcagcagcgagagcacgacctcgtacaggtgtca
gtcaacagaggggcggggcctcttcacggccgagtgctgggattggacaagctcatcgct
tctttgacgagagttagcaccgcccctcgcgtgactctgacggtgggcgtggccggcagc
ggtaagagccgatcggtccgccgtttcatccacctatggagctccggccaaatctatccc
gagataagtctcacaatccccattgcatgctgggagttaagtagtttcgaccgcctatcg
gtcgaacgcttactgcgactgtacgttccgtacgataacgtggacttaattatatttaac
gaatcctgcaaggtgttgctcattttcgacggactagaagaattccgccaatcgttggat
ttcgcagatgccccgcccaacagcgacccccgtcgtgaaattccagtatcggatctcatt
gcgaatatcgtacgaggaaaccttttgccaggggcgacgctctggcttttatcgaggcct
ggcactggggcgaaagttccggcgggattggtcgatcgtgtgacggaagccccgcctctt
tctcggatgcaaataaaggattatattaatcactgcattacaaacacgctagatgcgtat
tcgctatcactagacagcttgtcgtctcaaacgaacacacctgaggatgtttcctcccat
gtttggacgtatctaaattcccagaaaccattgctgattttatcttccgtgcccacggtt
tgtcacattatcgtaacgacgctatcgcgtcttataaagttggactcggaagccacgccc
cttccccggactctaacggaagtctacgcccactattgttggccacacctctcaggatca
gacgctccaagtggcggcatcaggaagtcgcttagcactctgggtcgtcttgctttttat
agcctcttacgacggcggtatacgtttagcgaggctgaattacgaacctatggtgttgat
gtaccgcctcagagcgggacgcttggcttccgcatcctccaacgcaggcaaagctggtcg
tctgatagcgtagcttggcagttttcacacacatccatacaggagttcctgggggcgctc
ttttactatatttcgtcgagacgcgggatgttcgatctgttttccgaaagcggcgtttct
tggccacgcatcggcttccacagccactaccgtgcagcgctccagaaaaccaaccaatcg
gatgttgcggcgcaaggcaacctcgatctcttcatgcgcttcctgtcggggctgctttct
ccagcggctgcgactttgcttggcggttcgttgagcgttggacacgaggagcaagtgacc
cagcggacaacagcgacaactttgcttcagaacgccgtgaccgcgactggaggcgattct
gttagtatgcgcagcgttacgatggtaacgtgtctggcggagctgcagcaggtggagttg
ctacgatccgtagaggatgatcttgtcaactgcagcctgcggggaaagctgaagggtgga
gtttgcgctgtgctcgcctacttgttgcaagtatcagatgcgtgtactgaggagacgcag
ctgtccaactgtttagactccgcctccttgaagaggctcctcccacagctgctgtactgc
agtaagctgagaatggaaaacaatgaatttaaggaaggcaccatggagttgttgggaagt
ctgctgagtgccaaagagtgccatattcagatgctcagtctggctgataactccattagc
agtaaaggcattaaaccgctcagtcgggctctactcgtcaaccgaaccctcacgactctg
gatctgcgtgggaacaacatcggcgcaaagggagcaaagacgttatgtgaagccctaaaa
ttgaaccaattcctcgtgtcagtcaatctgcagaataaccacatagaggatgaaggagcg
cgtgcgctagcagaggtacttcaatcgaaccgaaagctcaccacactcaatgttcagaag
aatggcattgggccagaaggagtgaaaaaaatcggcgaggcccttacaaagaatcaaact
ctacaagatctcaatgtctccagcaatcatttgggtgatttgggaacagtagctcttgct
caagctcttatggtcaaccacgtacttcacacgcttagtcttcagagtaactcagtgagt
gacagaggcattaaagctctctcacacgctcttcagtcaaaccgaggactcagctgtctg
aatctaagggagaattcaataggagtctctggagccaaagacatcgccaaagccttaaaa
gtcaacacttgtcttagggaacttgatctgacagctaatcttcttcacgatgagggagtg
acggccatcgctgaagccatgagggtcaacagagccatcacatccttacatctccagtgg
aactttatgaaggcgggagccgccaaagctttagctcagtctctcatgagcaacacctgc
attcagctgctagatctgcaggagaacgctctgggtgataacggcatcattgctctggcc
tgtgctctgaggtcaaactcttctctcaatgtgctctaccttcaaggtgtatcagcggct
aaatcaggagctgttgcactagcggatgctctggtggtcaacgaaagccttcatacactt
gatctgcgtggaaactccatcgggatggaaggagcaaaggcgttttccagtgctctgaaa
aacaacaggagcttaagaagtctcaatttacaggagaattctctggggatggatggagcg
atcttcatcgctactgcgctgagaggaaaccatcagctcacctacatcaatctccagggt
aatggcatcggggagtcaggggcaaaggtcgtctcagacgccatcaaagctggtgcacca
gattgcgtggtggatatctag
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