Garra rufa (doctor fish): 141300813
Help
Entry
141300813 CDS
T11039
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00071
Fatty acid degradation
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
grf04148
Efferocytosis
grf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
141300813
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141300813
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141300813
03320 PPAR signaling pathway
141300813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
grf03029
]
141300813
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
141300813
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
141300813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
141300813
NCBI-ProteinID:
XP_073687209
LinkDB
All DBs
Position
24:34473817..34499825
Genome browser
AA seq
786 aa
AA seq
DB search
MAEAHQAVAFQFTITPEGIDLQLSHQALRQVYLSGLRSWKKRVTRLKNNVITGVYPASPS
SWLFVVIAILATMYTRSDPSMGLIAKIQEHLPVSDSLSVQCRTVVSAVLFSTLLWFSLIF
TMRLCLKQLLSYHGWMFEQHGKVSNTTKIWAAMVRIFSGRQPLLYSYQGSLPNLPVPTVK
DTVKRFLESARPLMSDSEYERMTTLAKEFENSLGNRLQWYLKLKAMWASNYVSDWWEEYV
YLRGRGPLMVNSNYYGMDFLYVTPTPIQAARAGNTLHACLLYRRKLNREEIKPSRVPVLN
VPLCAAQCERIFNTTRIPGEETDSLVHWQDSEYVAVFHRGRYFRLWLYHAARMLSPREIE
QQIQRILDDPSPPVPGEAKLAALTAGDRIPWAQARKEFFSSGVNKRSLDCIEKAAFFVSL
DDDEQGMRGDDPAGNLDRYAKSLLHGKCYDRWFDKSFTVVVYKNGKNGLNAEHSWADAPI
MAHVWEYVMTTDSFQLGYTEEGHCKGDVASSLPPPTRLTWDIPAECQQRIERSLAVAQAI
ADDVDFHVLPIQEFGKGAIKKCKISPDAFIQIALQLAYYRNRGSFTLTYEASMTRLFREG
RTETVRSCTSESCTFVRALEGGESKEVCQRLFRTAAEKHQHLYRMAMTGGGIDRHLFCLY
IVSKYLGEESPFLKEVLSETWRLSTSQTPLQQVELFDFVNHPEYTTCGGGFGPVADDGYG
VSYIIIGENMINLHISCKHSCPQTDSHKFGADIKKAMEDLLELMSPEKQGLSKSEQNHSR
NSKKDL
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcgcatcaggctgtggcgtttcagttcactatcactccggaggggatcgac
ctgcagctgtcccatcaggccttgagacaggtttatctgtcaggcctccgctcctggaag
aaacgcgtcactcggctgaagaacaacgtgatcactggtgtgtatcccgccagcccgtcc
tcatggctgtttgtcgtcatcgcgatcttggccaccatgtacacgcgctcagacccttcc
atgggcctcatcgctaaaatccaagaacatctgccggtcagtgattctctgagcgttcag
tgtcggacggtggtttctgccgtgttgttcagcactctgctctggttctccctgatcttc
accatgaggctttgcctgaagcagttactgtcgtatcacggctggatgtttgaacagcat
gggaaagtatcgaacaccaccaaaatctgggcggccatggtccggatcttctcaggcaga
cagcctctgttgtacagctaccaaggctctttgcccaacttgcctgttcctacagtcaag
gacactgttaagaggtttctggaatcggcgcgtccgttgatgagcgattccgaatacgag
aggatgacgactctggccaaggagtttgagaacagtctgggaaaccgcctgcagtggtac
ctcaaactcaaagccatgtgggcatccaactatgtcagcgattggtgggaggagtatgtc
tacctgagggggcgtggcccactcatggtcaatagcaactactatggaatggacttcctg
tacgtgactcctacaccgattcaagccgcgagagcaggaaacacactgcacgcgtgtctc
ttgtaccgcaggaaactcaacagagaggaaatcaaacctagtcgtgtgccggttttaaat
gttccattgtgtgctgctcaatgtgagaggattttcaacaccacacgcattccaggagaa
gagacagactccctggtccactggcaagacagtgagtatgtggcagtgttccacagaggc
cgttatttccgcctgtggctgtaccatgctgcccgcatgctgtctcccagagagatcgag
caacagattcagcgcattctggatgacccgtcacctccagtgcctggagaggctaaacta
gcagccctgactgcaggagacagaatcccttgggctcaggcaaggaaggagttcttcagc
tcaggagttaataagagatctctggactgcattgagaaagcggcgttcttcgtttccctg
gatgatgatgagcaaggcatgaggggagatgatcctgctggcaatttggatcgatatgcc
aagtccctactgcacggcaaatgctacgacaggtggtttgataagtcgttcacggtggtg
gtgtataagaacgggaagaacggcctcaatgctgaacactcttgggcggatgcacctata
atggctcacgtgtgggagtatgtgatgactaccgatagtttccagctgggttatactgaa
gagggtcactgtaaaggagacgtagcctcctccctgcctccaccaactagactaacctgg
gacatacctgcagagtgtcagcagcgtatcgaacgctctcttgctgtggctcaggcaata
gcagatgatgtcgactttcatgtgttgccaatacaagagtttggcaaaggcgccatcaaa
aagtgtaaaatcagcccggatgccttcattcagattgcactacagttggcctattacagg
aaccgaggctcgttcactctgacctacgaagcctcaatgacccgtttattccgcgagggc
cggactgagactgtgcgctcctgcaccagcgagagctgtaccttcgtcagagctctggag
ggtggagagagtaaggaagtgtgtcagcgtctcttccgtacagcggctgagaaacaccaa
catctttacaggatggcaatgacaggaggaggaatagacagacacctgttctgcctctac
attgtgtccaaatacctgggagaggagtcacctttcctcaaagaggtgctttcagaaaca
tggcgtctgtccaccagtcagactcctctccagcaggtggagctgtttgatttcgttaac
cacccagagtacaccacctgcggtggaggatttggcccggttgcagatgatggttacggc
gtgtcttacatcatcatcggagaaaacatgatcaacttgcacatttcctgcaagcactct
tgtcctcaaactgattctcacaagtttggagctgatatcaagaaggccatggaggatctc
ctggagctgatgtcaccggaaaaacaaggcctgtccaaatctgagcagaaccactcaagg
aacagcaaaaaagacctgtag
DBGET
integrated database retrieval system
